UBERON:0006531: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=we follow MA in making this a subckass of extra-ocular muscle but the distinction is not clear | |comment=we follow MA in making this a subckass of extra-ocular muscle but the distinction is not clear | ||
|created_by= | |created_by= | ||
| | |def="The muscles that move the eye. Included in this group are the medial rectus, lateral rectus, superior rectus, inferior rectus, inferior oblique, superior oblique, musculus orbitalis, and levator palpebrae superioris." [MESH:A.02.633.567.700] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006531 | |||
|is_a=UBERON:0001601 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=oculomotor muscle | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=MA:0002432;;MESH:A.02.633.567.700;;ncithesaurus:Oculomotor_Muscle | |||
}} | }} | ||
Latest revision as of 17:57, 12 September 2014
| Name: | oculomotor muscle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The muscles that move the eye. Included in this group are the medial rectus, lateral rectus, superior rectus, inferior rectus, inferior oblique, superior oblique, musculus orbitalis, and levator palpebrae superioris." [MESH:A.02.633.567.700] | ||
| Xrefs: |
| ||
| Comments: | we follow MA in making this a subckass of extra-ocular muscle but the distinction is not clear |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001601(extra-ocular muscle) |
|---|
Children
| is a: | UBERON:0006533 (rectus extraocular muscle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006531 (oculomotor muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
