Personal tools

UBERON:0006925: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0006925
|alt_id=
|name=digestive gland
|namespace=
|def="A gland, such as the liver or pancreas, that secretes into the alimentary canal substances necessary for digestion." [The_American_Heritage_Dictionary_of_the_English_Language:Fourth_Edition._2000.]
|xref=AAO:0000130;;BTO:0000345
|is_a=UBERON:0002368
|synonym="digestive system gland" EXACT [AAO:0000130]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A gland, such as the liver or pancreas, that secretes into the alimentary canal substances necessary for digestion." [The_American_Heritage_Dictionary_of_the_English_Language:Fourth_Edition._2000.]
|subset=organ_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006925
|is_a=UBERON:0002368 ;;UBERON:0013765
|is_obsolete=
|located_in=
|located_in=
|name=digestive gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001007
|part_of=UBERON:0001007
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="digestive system gland" EXACT [AAO:0000130]
|union_of=
|xref=AAO:0000130;;BTO:0000345
}}
}}

Latest revision as of 17:59, 12 September 2014

Name:digestive gland
Namespace:FANTOM
Definition:"A gland, such as the liver or pancreas, that secretes into the alimentary canal substances necessary for digestion." [The_American_Heritage_Dictionary_of_the_English_Language:Fourth_Edition._2000.]
Xrefs:
links:

AAO:0000130

BTO:0000345
Synonyms: "digestive system gland" EXACT [AAO:0000130]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002368(endocrine gland),UBERON:0013765(digestive system element)
part_of:UBERON:0001007(digestive system)



Children

is a:UBERON:0002107 (liver)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006925 (digestive gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.93e-83FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_07cb4cb3284c103e2c82024f06e38422p5@NR1H4
3.93e-83FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_07cb4cb3284c103e2c82024f06e38422p5@NR1H4
1.46e-82FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_71f79895d6458082dc295d7372a8282bp7@TOP1MT
1.46e-82FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_71f79895d6458082dc295d7372a8282bp58@APOB
1.46e-82FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_71f79895d6458082dc295d7372a8282bp58@APOB
1.46e-82FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_71f79895d6458082dc295d7372a8282bp7@TOP1MT
5.75e-76FFCP PHASE2:Hg19::chrX:153769426..153769436,+#_8b98e22000b7c8f71ae199ae4e3896fap18@IKBKG
5.75e-76FFCP PHASE1:Hg19::chrX:153769426..153769436,+#_8b98e22000b7c8f71ae199ae4e3896fap18@IKBKG
9.69e-76FFCP PHASE1:Hg19::chr10:7745167..7745178,+#_b3dded6bc6b25db74f0b1d58937d9bc2p3@ITIH2
9.69e-76FFCP PHASE2:Hg19::chr10:7745167..7745178,+#_b3dded6bc6b25db74f0b1d58937d9bc2p3@ITIH2
1.94e-75FFCP PHASE2:Hg19::chr2:97216132..97216143,+#_cf67723aa01e258ce1d2f9b29e1d57d6p@chr2:97216132..97216143, +
1.94e-75FFCP PHASE1:Hg19::chr2:97216132..97216143,+#_cf67723aa01e258ce1d2f9b29e1d57d6p@chr2:97216132..97216143, +
1.74e-73FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_8a2da453a85c7e80245a952359ff852dp1@ENST00000421143
1.74e-73FFCP PHASE2:Hg19::chr2:21239379..21239390,-#_8a2da453a85c7e80245a952359ff852dp@chr2:21239379..21239390, -
1.74e-73FFCP PHASE1:Hg19::chr10:82049381..82049384,-#_8a2da453a85c7e80245a952359ff852dp9@MAT1A
1.74e-73FFCP PHASE2:Hg19::chr2:21258509..21258518,-#_8a2da453a85c7e80245a952359ff852dp@chr2:21258509..21258518, -
1.74e-73FFCP PHASE2:Hg19::chr2:21228233..21228242,-#_8a2da453a85c7e80245a952359ff852dp56@APOB
1.74e-73FFCP PHASE1:Hg19::chr2:21258509..21258518,-#_8a2da453a85c7e80245a952359ff852dp@chr2:21258509..21258518, -
1.74e-73FFCP PHASE1:Hg19::chr2:21228233..21228242,-#_8a2da453a85c7e80245a952359ff852dp56@APOB
1.74e-73FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_8a2da453a85c7e80245a952359ff852dp1@ENST00000421143
1.74e-73FFCP PHASE2:Hg19::chr20:22566089..22566097,-#_8a2da453a85c7e80245a952359ff852dp6@FOXA2
1.74e-73FFCP PHASE1:Hg19::chr2:21239379..21239390,-#_8a2da453a85c7e80245a952359ff852dp@chr2:21239379..21239390, -
1.74e-73FFCP PHASE2:Hg19::chr10:82049381..82049384,-#_8a2da453a85c7e80245a952359ff852dp9@MAT1A
1.74e-73FFCP PHASE1:Hg19::chr20:22566089..22566097,-#_8a2da453a85c7e80245a952359ff852dp6@FOXA2
2.11e-73FFCP PHASE2:Hg19::chr1:230846000..230846009,-#_baf39ba1aeb34181e19baf9d1379e1c7p@chr1:230846000..230846009, -
2.11e-73FFCP PHASE1:Hg19::chr14:94844853..94844862,-#_baf39ba1aeb34181e19baf9d1379e1c7p35@SERPINA1
2.11e-73FFCP PHASE2:Hg19::chr14:94844853..94844862,-#_baf39ba1aeb34181e19baf9d1379e1c7p35@SERPINA1
2.11e-73FFCP PHASE1:Hg19::chr1:230846000..230846009,-#_baf39ba1aeb34181e19baf9d1379e1c7p@chr1:230846000..230846009, -
1.22e-72FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_7c6a8fb182ac8d9676391bb9c66c349bp@chr5:90897694..90897705, +
1.22e-72FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_7c6a8fb182ac8d9676391bb9c66c349bp@chr5:90897694..90897705, +
1.97e-72FFCP PHASE2:Hg19::chr2:21256369..21256378,-#_84092a2421983a379fc0ef84080bbf7ep@chr2:21256369..21256378, -
1.97e-72FFCP PHASE1:Hg19::chr2:21232865..21232870,-#_84092a2421983a379fc0ef84080bbf7ep10@BC172787
1.97e-72FFCP PHASE1:Hg19::chr2:21256369..21256378,-#_84092a2421983a379fc0ef84080bbf7ep@chr2:21256369..21256378, -
1.97e-72FFCP PHASE1:Hg19::chr10:7763609..7763619,+#_84092a2421983a379fc0ef84080bbf7ep@chr10:7763609..7763619, +
1.97e-72FFCP PHASE1:Hg19::chr2:44066386..44066398,-#_84092a2421983a379fc0ef84080bbf7ep6@ABCG5
1.97e-72FFCP PHASE2:Hg19::chr10:7763609..7763619,+#_84092a2421983a379fc0ef84080bbf7ep@chr10:7763609..7763619, +
1.97e-72FFCP PHASE1:Hg19::chr12:57828432..57828442,+#_84092a2421983a379fc0ef84080bbf7ep7@INHBC
1.97e-72FFCP PHASE2:Hg19::chr2:21230675..21230682,-#_84092a2421983a379fc0ef84080bbf7ep51@APOB
1.97e-72FFCP PHASE1:Hg19::chr2:21234502..21234510,-#_84092a2421983a379fc0ef84080bbf7ep43@APOB
1.97e-72FFCP PHASE2:Hg19::chr2:21232865..21232870,-#_84092a2421983a379fc0ef84080bbf7ep10@BC172787
1.97e-72FFCP PHASE2:Hg19::chr2:21234502..21234510,-#_84092a2421983a379fc0ef84080bbf7ep43@APOB
1.97e-72FFCP PHASE2:Hg19::chr2:20793103..20793113,-#_84092a2421983a379fc0ef84080bbf7ep@chr2:20793103..20793113, -
1.97e-72FFCP PHASE2:Hg19::chr17:7082861..7082882,-#_84092a2421983a379fc0ef84080bbf7ep9@ASGR1
1.97e-72FFCP PHASE2:Hg19::chr12:57828432..57828442,+#_84092a2421983a379fc0ef84080bbf7ep7@INHBC
1.97e-72FFCP PHASE1:Hg19::chr2:20793103..20793113,-#_84092a2421983a379fc0ef84080bbf7ep@chr2:20793103..20793113, -
1.97e-72FFCP PHASE1:Hg19::chr17:7082861..7082882,-#_84092a2421983a379fc0ef84080bbf7ep9@ASGR1
1.97e-72FFCP PHASE1:Hg19::chr2:21231676..21231681,-#_84092a2421983a379fc0ef84080bbf7ep75@APOB
1.97e-72FFCP PHASE1:Hg19::chr2:21230675..21230682,-#_84092a2421983a379fc0ef84080bbf7ep51@APOB
1.97e-72FFCP PHASE2:Hg19::chr2:44066386..44066398,-#_84092a2421983a379fc0ef84080bbf7ep6@ABCG5
1.97e-72FFCP PHASE2:Hg19::chr2:21231676..21231681,-#_84092a2421983a379fc0ef84080bbf7ep75@APOB
2.2e-72FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_560adcf0121e147f73f691568a35e542p@chr19:25169885..25169900, +
2.2e-72FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_560adcf0121e147f73f691568a35e542p@chr19:25169885..25169900, +
5.51e-71FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_66affa7e0ad7854850ff6c08afb37884p6@Insc
5.51e-71FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_66affa7e0ad7854850ff6c08afb37884p6@Insc
1.05e-70FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_2ea922e1bfa31ac8393c4869432b7ae5p6@NR1H4
1.05e-70FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_2ea922e1bfa31ac8393c4869432b7ae5p6@NR1H4
1.7e-70FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_d38135433bc12fde5f423a846064d6bcp2@uc009nzu.1
1.7e-70FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_d38135433bc12fde5f423a846064d6bcp2@uc009nzu.1
8.65e-70FFCP PHASE1:Hg19::chr17:7082560..7082572,-#_40ed2107725f2a3abbd12b87456d9628p4@ASGR1
8.65e-70FFCP PHASE2:Hg19::chr17:7082560..7082572,-#_40ed2107725f2a3abbd12b87456d9628p4@ASGR1
1.02e-69FFCP PHASE2:Hg19::chr10:72083665..72083701,-#_2e6170b1602c48c1e0d580ff4a759844p2@LRRC20
1.02e-69FFCP PHASE1:Hg19::chr10:72083665..72083701,-#_2e6170b1602c48c1e0d580ff4a759844p2@LRRC20
1.64e-69FFCP PHASE2:Hg19::chr1:11107289..11107304,-#_7d6759af9aea4a388b523b8143cb6bc4p1@MASP2
1.64e-69FFCP PHASE2:Hg19::chr9:116838918..116838930,-#_7d6759af9aea4a388b523b8143cb6bc4p@chr9:116838918..116838930, -
1.64e-69FFCP PHASE1:Hg19::chr9:116838918..116838930,-#_7d6759af9aea4a388b523b8143cb6bc4p@chr9:116838918..116838930, -
1.64e-69FFCP PHASE1:Hg19::chr1:11107289..11107304,-#_7d6759af9aea4a388b523b8143cb6bc4p1@MASP2
2.08e-69FFCP PHASE1:Hg19::chr3:197300199..197300219,-#_e6cb6eb02bafe3cc35ff4213890f22b2p2@BDH1
2.08e-69FFCP PHASE2:Hg19::chr3:197300199..197300219,-#_e6cb6eb02bafe3cc35ff4213890f22b2p2@BDH1
2.25e-69FFCP PHASE2:Hg19::chr4:155528001..155528060,-#_1eb49801a3694b46db580a16b22e5b3dp@chr4:155528001..155528060, -
2.25e-69FFCP PHASE2:Hg19::chr19:45430057..45430062,+#_1eb49801a3694b46db580a16b22e5b3dp1@APOC1P1
2.25e-69FFCP PHASE1:Hg19::chr9:116838988..116838999,-#_1eb49801a3694b46db580a16b22e5b3dp@chr9:116838988..116838999, -
2.25e-69FFCP PHASE2:Hg19::chr9:116838988..116838999,-#_1eb49801a3694b46db580a16b22e5b3dp@chr9:116838988..116838999, -
2.25e-69FFCP PHASE1:Hg19::chr4:155528001..155528060,-#_1eb49801a3694b46db580a16b22e5b3dp@chr4:155528001..155528060, -
2.25e-69FFCP PHASE1:Hg19::chr19:45430057..45430062,+#_1eb49801a3694b46db580a16b22e5b3dp1@APOC1P1
2.64e-69FFCP PHASE2:Hg19::chr17:7017634..7017649,-#_49d90ae101a6f66d017230d0f1b11472p7@ASGR2
2.64e-69FFCP PHASE1:Hg19::chr17:7017634..7017649,-#_49d90ae101a6f66d017230d0f1b11472p7@ASGR2
2.64e-69FFCP PHASE1:Hg19::chr11:116662593..116662620,-#_49d90ae101a6f66d017230d0f1b11472p1@APOA5
2.64e-69FFCP PHASE2:Hg19::chr11:116662593..116662620,-#_49d90ae101a6f66d017230d0f1b11472p1@APOA5
1.28e-68FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_38b386ac79fa735bd36c1cbea3232e08p5@Bhmt
1.28e-68FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_38b386ac79fa735bd36c1cbea3232e08p5@Bhmt
2.72e-68FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_e813a0a3401e16736f1ca99c4124f643p@chr1:162917234..162917248, +
2.72e-68FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_e813a0a3401e16736f1ca99c4124f643p@chr1:162917234..162917248, +
3.5e-68FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_048d351b28aa59b9e4573324d94e57e2p1@Rtp3
3.5e-68FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_048d351b28aa59b9e4573324d94e57e2p1@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_d5d45b497c842b6831c59b786da0fa9dp2@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_d5d45b497c842b6831c59b786da0fa9dp@chr7:112744083..112744109, -
2.47e-67FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_d5d45b497c842b6831c59b786da0fa9dp@chr7:112744083..112744109, -
2.47e-67FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_d5d45b497c842b6831c59b786da0fa9dp2@Rtp3
6.55e-67FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_ab41e22eb7d03c0c05857f505c55c302p@chr13:23928766..23928779, +
6.55e-67FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_ab41e22eb7d03c0c05857f505c55c302p@chr13:23928766..23928779, +
7.85e-67FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_2e465f2021c9dbb91f7135c4d85f2a85p3@Blvrb
7.85e-67FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_2e465f2021c9dbb91f7135c4d85f2a85p3@Blvrb
1.58e-66FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr2:10041210..10041222, -
1.58e-66FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr16:22894900..22894910, +
1.58e-66FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr2:10041210..10041222, -
1.58e-66FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr6:128436166..128436185, -
1.58e-66FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_49ee6d7eba0ea010ffd189adfe7ee9dcp@chr16:22898981..22898988, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0006925&oldid=3277872"