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{{UBERON
{{UBERON
|id=UBERON:0007238
|alt_id=
|name=1st arch maxillary component
|namespace=
|def=
|xref=EHDAA2:0000038;;EHDAA:595;;EMAPA:16388;;VHOG:0000511
|is_a=UBERON:0005423
|synonym=
|comment=Editors note: relationship to palatoquadrate to be added
|comment=Editors note: relationship to palatoquadrate to be added
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007238
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=1st arch maxillary component
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000922;;UBERON:0004362
|part_of=UBERON:0000922;;UBERON:0004362
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0000038;;EHDAA:595;;EMAPA:16388;;VHOG:0000511
}}
}}

Latest revision as of 18:00, 12 September 2014

Name:1st arch maxillary component
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0000038
EHDAA:595
EMAPA:16388

VHOG:0000511
Comments:Editors note: relationship to palatoquadrate to be added

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0004362(pharyngeal arch 1)



Children

develops from:UBERON:0005620 (primary palate),UBERON:0005868 (maxillary prominence)
part of:UBERON:0010045 (1st arch maxillary mesenchyme)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007238 (1st arch maxillary component), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_a86e3cda03d76eb017e52e9545bce3fbp14@C17orf67
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_a86e3cda03d76eb017e52e9545bce3fbp14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_e1332b23fdd59c97996907c9c78960fbp13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_e1332b23fdd59c97996907c9c78960fbp11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_e1332b23fdd59c97996907c9c78960fbp13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_e1332b23fdd59c97996907c9c78960fbp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_e1332b23fdd59c97996907c9c78960fbp12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_e1332b23fdd59c97996907c9c78960fbp11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_e1332b23fdd59c97996907c9c78960fbp12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_e1332b23fdd59c97996907c9c78960fbp@chr8:57353655..57353662, -
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_b20cacb3cdfdc83cbc53245d4c4f8a2cp14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_b20cacb3cdfdc83cbc53245d4c4f8a2cp14@MAB21L2
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_b20cacb3cdfdc83cbc53245d4c4f8a2cp@chr5:75912402..75912418, -
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_b20cacb3cdfdc83cbc53245d4c4f8a2cp@chr5:75912402..75912418, -
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_9682a8de04fa770e3798cd6bfd39dd05p@chr4:151505582..151505614, +
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_9682a8de04fa770e3798cd6bfd39dd05p@chr4:151505582..151505614, +
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_493cb85b9adbec4977a448e3f183c9f3p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_493cb85b9adbec4977a448e3f183c9f3p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_493cb85b9adbec4977a448e3f183c9f3p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_493cb85b9adbec4977a448e3f183c9f3p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_493cb85b9adbec4977a448e3f183c9f3p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_493cb85b9adbec4977a448e3f183c9f3p17@RSRC1
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_7e7a8a87d055f7ab797ec600e061a8d5p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_7e7a8a87d055f7ab797ec600e061a8d5p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_250bb593c7c536e9f6b74abfec98bc87p7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_250bb593c7c536e9f6b74abfec98bc87p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_250bb593c7c536e9f6b74abfec98bc87p1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_250bb593c7c536e9f6b74abfec98bc87p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_250bb593c7c536e9f6b74abfec98bc87p1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_250bb593c7c536e9f6b74abfec98bc87p7@ALX1
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_f7b7070a8b3c25985ae78cc1e4ea827ap23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_f7b7070a8b3c25985ae78cc1e4ea827ap23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_f7b7070a8b3c25985ae78cc1e4ea827ap@chr2:33519090..33519092, +
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_f7b7070a8b3c25985ae78cc1e4ea827ap@chr2:33519090..33519092, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_3c4df422d5d663b112b6dc7febb0f8a7p@chr8:57353779..57353790, -
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_892d023146aa70cbb1b503f1f904e5f2p2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_892d023146aa70cbb1b503f1f904e5f2p8@LHX8
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_892d023146aa70cbb1b503f1f904e5f2p12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_892d023146aa70cbb1b503f1f904e5f2p2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_892d023146aa70cbb1b503f1f904e5f2p12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_892d023146aa70cbb1b503f1f904e5f2p8@LHX8
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_7c200e08f5c0e0e01fe846efc2527a97p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_7c200e08f5c0e0e01fe846efc2527a97p@chr5:75912831..75912842, -
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_7c200e08f5c0e0e01fe846efc2527a97p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_7c200e08f5c0e0e01fe846efc2527a97p@chr5:75912831..75912842, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_8945a5225a4cf167469c0bc4955ee7a2p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_8945a5225a4cf167469c0bc4955ee7a2p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_8945a5225a4cf167469c0bc4955ee7a2p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_8945a5225a4cf167469c0bc4955ee7a2p@chr6:46190219..46190230, -
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_51f97aacebbe64e0f9cc94dc16f2536cp4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_51f97aacebbe64e0f9cc94dc16f2536cp5@PENK
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_51f97aacebbe64e0f9cc94dc16f2536cp@chr10:15760985..15760992, -
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_51f97aacebbe64e0f9cc94dc16f2536cp@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_51f97aacebbe64e0f9cc94dc16f2536cp5@PENK
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_51f97aacebbe64e0f9cc94dc16f2536cp4@CPZ
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_06f3b655d7cb4c3ae80ea45580dad5e9p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_06f3b655d7cb4c3ae80ea45580dad5e9p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_fc36ad46830b23330193d99e97069dc7p@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_fc36ad46830b23330193d99e97069dc7p@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_2bbe28601c475f532fb0d0770722c1e8p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_2bbe28601c475f532fb0d0770722c1e8p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_2bbe28601c475f532fb0d0770722c1e8p@chr8:57353676..57353688, -
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_2bbe28601c475f532fb0d0770722c1e8p@chr8:57353676..57353688, -
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_f464bbbaf8821f47fdd41892689ba44dp4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_f464bbbaf8821f47fdd41892689ba44dp12@FBN2
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_f464bbbaf8821f47fdd41892689ba44dp@chr5:19721484..19721507, -
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_f464bbbaf8821f47fdd41892689ba44dp4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_f464bbbaf8821f47fdd41892689ba44dp12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_f464bbbaf8821f47fdd41892689ba44dp@chr5:19721484..19721507, -
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_8d9276ce708e4d0a640055119c7db190p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_8d9276ce708e4d0a640055119c7db190p@chr8:57353982..57353991, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_8d9276ce708e4d0a640055119c7db190p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_8d9276ce708e4d0a640055119c7db190p@chr8:57353982..57353991, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_8d9276ce708e4d0a640055119c7db190p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_8d9276ce708e4d0a640055119c7db190p@chr8:57354360..57354367, +
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_e3a8f93c3470ab772a52f51306109b68p7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_e3a8f93c3470ab772a52f51306109b68p10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_e3a8f93c3470ab772a52f51306109b68p10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_e3a8f93c3470ab772a52f51306109b68p7@SHOX2
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_265282ed1ec91067f97dff6bb80a1309p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_265282ed1ec91067f97dff6bb80a1309p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_265282ed1ec91067f97dff6bb80a1309p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_265282ed1ec91067f97dff6bb80a1309p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_265282ed1ec91067f97dff6bb80a1309p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_265282ed1ec91067f97dff6bb80a1309p@chr22:28193943..28193956, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_4a3776bed55ffea58687950d8dba4ab6p@chr1:21904551..21904569, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_4a3776bed55ffea58687950d8dba4ab6p@chr1:21904551..21904569, -
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_6a8344f7298bbd9edaabd76308515e8fp18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_6a8344f7298bbd9edaabd76308515e8fp@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_6a8344f7298bbd9edaabd76308515e8fp18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_6a8344f7298bbd9edaabd76308515e8fp@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_6a8344f7298bbd9edaabd76308515e8fp@chr14:89044406..89044416, +
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_6a8344f7298bbd9edaabd76308515e8fp@chr8:57359975..57359992, -
4.2e-29FFCP PHASE2:Hg19::chr15:52606315..52606320,-#_c93f8c3a06067c03efdc170d189091b9p@chr15:52606315..52606320, -
4.2e-29FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_c93f8c3a06067c03efdc170d189091b9p@chr15:52606315..52606320, -

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