UBERON:0007285: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007285
|name=presumptive paraxial mesoderm
|namespace=
|def=
|xref=EFO:0003443;;XAO:0004134;;ZFA:0000591
|is_a=UBERON:0006598
|synonym=
|comment=
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{{UBERON | {{UBERON | ||
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|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007285 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=presumptive paraxial mesoderm | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000926 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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|xref=EFO:0003443;;TAO:0000591;;XAO:0004134;;ZFA:0000591 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | presumptive paraxial mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|---|
| part_of: | UBERON:0000926(mesoderm) |
Children
| develops from: | UBERON:0003077 (paraxial mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007285 (presumptive paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.34e-47 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_da6469b2e3e79e899c3a1dd89721a96b | p@chrX:160838683..160838694, + |
| 1.34e-47 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_da6469b2e3e79e899c3a1dd89721a96b | p@chrX:160838683..160838694, + |
| 8.78e-44 | FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_ec96ec97f2abae26dd98be8534b14db4 | p8@ARHGAP22 |
| 8.78e-44 | FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_ec96ec97f2abae26dd98be8534b14db4 | p8@ARHGAP22 |
| 5.06e-41 | FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_3160e56526f7773f632f48e47eddcd91 | p@chrX:65748600..65748616, + |
| 5.06e-41 | FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_3160e56526f7773f632f48e47eddcd91 | p@chr12:105433069..105433075, - |
| 5.06e-41 | FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_3160e56526f7773f632f48e47eddcd91 | p@chrX:65748600..65748616, + |
| 5.06e-41 | FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_3160e56526f7773f632f48e47eddcd91 | p@chr12:105433069..105433075, - |
| 3.83e-40 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_610203e0bf35447471bd0e0ba6e0dc4f | p@chr6:53359400..53359406, + |
| 3.83e-40 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_610203e0bf35447471bd0e0ba6e0dc4f | p@chr6:53359400..53359406, + |
| 6.64e-40 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_f13ee24a66c598a22742a401741fd215 | p@chrX:160838787..160838800, + |
| 6.64e-40 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_f13ee24a66c598a22742a401741fd215 | p@chrX:160838787..160838800, + |
| 1.1e-38 | FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_82c312933ff0da6ffc915ef6b7907db8 | p4@ARHGAP22 |
| 1.1e-38 | FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_82c312933ff0da6ffc915ef6b7907db8 | p4@ARHGAP22 |
| 2.48e-38 | FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_1a1b3873e9f8695dc7dba0695cea4a77 | p@chr9:35685631..35685657, + |
| 2.48e-38 | FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_1a1b3873e9f8695dc7dba0695cea4a77 | p@chr9:35685631..35685657, + |
| 9.32e-38 | FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_da24669f43b612f5afd6cfab0a285def | p2@SASH1 |
| 9.32e-38 | FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_da24669f43b612f5afd6cfab0a285def | p2@SASH1 |
| 6.65e-36 | FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_005a4f8635c8a95dfdb10bf20f0f053d | p@chr11:81849982..81850000, + |
| 6.65e-36 | FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_005a4f8635c8a95dfdb10bf20f0f053d | p@chr11:81849982..81850000, + |
| 6.84e-36 | FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_4de02469abeb6c0b6ae7dd7f725edfe2 | p3@ARHGAP22 |
| 6.84e-36 | FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_4de02469abeb6c0b6ae7dd7f725edfe2 | p3@ARHGAP22 |
| 1.05e-34 | FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_e6bb6147b70e97fd2f2af97745869e15 | p2@RCN3 |
| 1.05e-34 | FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_e6bb6147b70e97fd2f2af97745869e15 | p2@RCN3 |
| 9.31e-34 | FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_39a033c066c4639b8803677984d42363 | p@chr9:35685445..35685517, + |
| 9.31e-34 | FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_39a033c066c4639b8803677984d42363 | p@chr9:35685445..35685517, + |
| 1.65e-33 | FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_00aea23b2538efc027ef19b9817c270d | p@chr9:35684475..35684520, + |
| 1.65e-33 | FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_00aea23b2538efc027ef19b9817c270d | p@chr9:35684475..35684520, + |
| 1.81e-33 | FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_a99b3c583c36075ea24b0b98c8dd3984 | p@chr13:119579287..119579292, + |
| 1.81e-33 | FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_a99b3c583c36075ea24b0b98c8dd3984 | p@chr13:119579287..119579292, + |
| 2.11e-33 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_14c8755052ffc31348e356e350b5b235 | p@chr17:14813242..14813246, - |
| 2.11e-33 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_14c8755052ffc31348e356e350b5b235 | p@chr17:14813242..14813246, - |
| 2.37e-33 | FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_f27d7d5adfd980cfd618ba042a144c13 | p3@IFI27L2 |
| 2.37e-33 | FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_f27d7d5adfd980cfd618ba042a144c13 | p3@IFI27L2 |
| 3.52e-33 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_38ec70fc31d01c0386236432818ef1ff | p2@LRRC17 |
| 3.52e-33 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_38ec70fc31d01c0386236432818ef1ff | p2@LRRC17 |
| 9.55e-33 | FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_2ed32b99d4590e08363f5c247c28c6ab | p1@LRRC17 |
| 9.55e-33 | FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_2ed32b99d4590e08363f5c247c28c6ab | p1@LRRC17 |
| 1.29e-32 | FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_fe60181b31431434009429bf4e0a0e8e | p@chr9:35689148..35689192, + |
| 1.29e-32 | FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_fe60181b31431434009429bf4e0a0e8e | p@chr9:35689148..35689192, + |
| 3.07e-32 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160840048..160840057, + |
| 3.07e-32 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160840025..160840037, + |
| 3.07e-32 | FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160823859..160823870, + |
| 3.07e-32 | FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160823859..160823870, + |
| 3.07e-32 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160840025..160840037, + |
| 3.07e-32 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_8b3294877097a5814b72986fd63e6af6 | p@chrX:160840048..160840057, + |
| 4.43e-32 | FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_a4e3bf3b21f7f0dbe1522223023960a3 | p4@Gpr39 |
| 4.43e-32 | FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_a4e3bf3b21f7f0dbe1522223023960a3 | p4@Gpr39 |
| 6.91e-32 | FFCP PHASE1:Hg19::chr21:47518695..47518709,+#_bb220e8e4dc2dab4089c020b9590b6aa | p6@COL6A2 |
| 6.91e-32 | FFCP PHASE2:Hg19::chr21:47518695..47518709,+#_bb220e8e4dc2dab4089c020b9590b6aa | p6@COL6A2 |
| 1.87e-31 | FFCP PHASE1:Hg19::chr21:47518637..47518688,+#_22050b92f8eb4197e7d3ff130018e91f | p2@COL6A2 |
| 1.87e-31 | FFCP PHASE2:Hg19::chr21:47518637..47518688,+#_22050b92f8eb4197e7d3ff130018e91f | p2@COL6A2 |
| 1.97e-31 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_5d2ea63f73f822d48e2333978d925255 | p@chr4:74703497..74703511, + |
| 1.97e-31 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_5d2ea63f73f822d48e2333978d925255 | p@chr4:74703497..74703511, + |
| 2.69e-31 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_a38193267c3b9feb8057ec3c5304baf6 | p@chr2:134548872..134548879, - |
| 2.69e-31 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_a38193267c3b9feb8057ec3c5304baf6 | p@chr2:134548872..134548879, - |
| 5.9e-31 | FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_c20308c6ac2a9537d176b35a963439fc | p@chr9:35685273..35685313, + |
| 5.9e-31 | FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_c20308c6ac2a9537d176b35a963439fc | p@chr9:35685273..35685313, + |
| 1.59e-30 | FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_56e28fef9c1705ab267c1c03e68c593d | p1@AK074416 |
| 1.59e-30 | FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_56e28fef9c1705ab267c1c03e68c593d | p1@AK074416 |
| 2.29e-30 | FFCP PHASE2:Hg19::chr2:33359687..33359717,+#_e83c67bb520a67fd3a9423bea863eb84 | p2@LTBP1 |
| 2.29e-30 | FFCP PHASE1:Hg19::chr2:33359687..33359717,+#_e83c67bb520a67fd3a9423bea863eb84 | p2@LTBP1 |
| 4.87e-30 | FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_4a62a3ba0ad586cdced33ee79f88acb5 | p@chr7:100773764..100773799, - |
| 4.87e-30 | FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_4a62a3ba0ad586cdced33ee79f88acb5 | p@chr7:100773764..100773799, - |
| 5.03e-30 | FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_19eee7c5a81d3aef3262b1f6fb2a5c96 | p2@ELTD1 |
| 5.03e-30 | FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_19eee7c5a81d3aef3262b1f6fb2a5c96 | p2@ELTD1 |
| 5.09e-30 | FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_65e2596f0cdd29917f78315da09c08ed | p1@CU675118 |
| 5.09e-30 | FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_65e2596f0cdd29917f78315da09c08ed | p1@CU675118 |
| 1.0e-29 | FFCP PHASE2:Hg19::chr21:47532318..47532355,+#_8bfb94a81bb9385f37c0f9c0b6b63bf0 | p8@COL6A2 |
| 1.0e-29 | FFCP PHASE1:Hg19::chr21:47532318..47532355,+#_8bfb94a81bb9385f37c0f9c0b6b63bf0 | p8@COL6A2 |
| 1.82e-29 | FFCP PHASE2:Hg19::chr7:100773872..100773904,-#_65296c6626c14d9f6a851cc1e6634b66 | p@chr7:100773872..100773904, - |
| 1.82e-29 | FFCP PHASE1:Hg19::chr7:100773872..100773904,-#_65296c6626c14d9f6a851cc1e6634b66 | p@chr7:100773872..100773904, - |
| 1.95e-29 | FFCP PHASE2:Hg19::chr21:47542827..47542859,-#_8a2228c0470cd681bc16471abdd9ca78 | p@chr21:47542827..47542859, - |
| 1.95e-29 | FFCP PHASE1:Hg19::chr21:47542827..47542859,-#_8a2228c0470cd681bc16471abdd9ca78 | p@chr21:47542827..47542859, - |
| 2.28e-29 | FFCP PHASE1:Hg19::chr12:53492630..53492661,+#_396ca408e0ac99d341fd687147a6f961 | p4@IGFBP6 |
| 2.28e-29 | FFCP PHASE2:Hg19::chr12:53492630..53492661,+#_396ca408e0ac99d341fd687147a6f961 | p4@IGFBP6 |
| 2.31e-29 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_c6c2441ffa7f51bcb100208709ab3421 | p@chr11:102661517..102661541, - |
| 2.31e-29 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_c6c2441ffa7f51bcb100208709ab3421 | p@chr11:102661517..102661541, - |
| 3.61e-29 | FFCP PHASE2:Hg19::chr4:86699834..86699889,+#_067f42bb4997112f9362d6938ef74fbf | p5@ARHGAP24 |
| 3.61e-29 | FFCP PHASE1:Hg19::chr4:86699834..86699889,+#_067f42bb4997112f9362d6938ef74fbf | p5@ARHGAP24 |
| 5.21e-29 | FFCP PHASE2:Hg19::chr21:47532107..47532192,+#_bcb4c537dc08f5f40c79532fe361e8fd | p5@COL6A2 |
| 5.21e-29 | FFCP PHASE1:Hg19::chr21:47532107..47532192,+#_bcb4c537dc08f5f40c79532fe361e8fd | p5@COL6A2 |
| 5.71e-29 | FFCP PHASE2:Hg19::chr4:174430774..174430814,+#_fe7223d0f07ba4f8fd0cd0dc1e862485 | p@chr4:174430774..174430814, + |
| 5.71e-29 | FFCP PHASE1:Hg19::chr4:174430774..174430814,+#_fe7223d0f07ba4f8fd0cd0dc1e862485 | p@chr4:174430774..174430814, + |
| 5.79e-29 | FFCP PHASE1:Hg19::chr4:74702338..74702349,+#_578fcb1bc8fbbde9b6fb553cd487efa1 | p2@CXCL6 |
| 5.79e-29 | FFCP PHASE2:Hg19::chr4:74702338..74702349,+#_578fcb1bc8fbbde9b6fb553cd487efa1 | p2@CXCL6 |
| 7.21e-29 | FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_51f41033486e8fdfa522b6962741b8a4 | p@chr1:127574253..127574264, + |
| 7.21e-29 | FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_51f41033486e8fdfa522b6962741b8a4 | p@chr1:127574253..127574264, + |
| 7.95e-29 | FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_78e9bf5516b86b1fd4c233340e520361 | p11@Fam198b |
| 7.95e-29 | FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_78e9bf5516b86b1fd4c233340e520361 | p11@Fam198b |
| 8.93e-29 | FFCP PHASE1:Hg19::chr9:35685692..35685745,-#_73cd5687fd01c12ed130f06213e99847 | p2@TPM2 |
| 8.93e-29 | FFCP PHASE2:Hg19::chr9:35685692..35685745,-#_73cd5687fd01c12ed130f06213e99847 | p2@TPM2 |
| 9.39e-29 | FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_37091a8fec2c0dd3f8255d894e53bd7e | p7@Gpr39 |
| 9.39e-29 | FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_37091a8fec2c0dd3f8255d894e53bd7e | p7@Gpr39 |
| 1.07e-28 | FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_5586a2ae912f1e2bec1d9954c15c0ea0 | p11@Gpr39 |
| 1.07e-28 | FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_5586a2ae912f1e2bec1d9954c15c0ea0 | p11@Gpr39 |
| 1.11e-28 | FFCP PHASE1:Hg19::chr17:77020171..77020195,+#_b08025c2e7d231ec1d099a5428229da9 | p3@C1QTNF1 |
| 1.11e-28 | FFCP PHASE2:Hg19::chr17:77020171..77020195,+#_b08025c2e7d231ec1d099a5428229da9 | p3@C1QTNF1 |
| 1.22e-28 | FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_63fbf25f52c0d802441fa1d8803f480d | p@chrX:160839768..160839780, + |
| 1.22e-28 | FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_63fbf25f52c0d802441fa1d8803f480d | p@chrX:160839768..160839780, + |
