UBERON:0007842: Difference between revisions
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|located_in= | |located_in= | ||
|name=membrane bone | |name=membrane bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:03, 12 September 2014
| Name: | membrane bone | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Bone element that arises as a result of direct ossification." [VSAO:0000023] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|
Children
| is a: | UBERON:0008907 (dermal bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007842 (membrane bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_f3ae8865fb2b0ab892e3b0dd7b338dc7 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_f3ae8865fb2b0ab892e3b0dd7b338dc7 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_5142dbbc5298ff95a60b277322b98c6c | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_5142dbbc5298ff95a60b277322b98c6c | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_5142dbbc5298ff95a60b277322b98c6c | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_5142dbbc5298ff95a60b277322b98c6c | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_5142dbbc5298ff95a60b277322b98c6c | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_5142dbbc5298ff95a60b277322b98c6c | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_5142dbbc5298ff95a60b277322b98c6c | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_5142dbbc5298ff95a60b277322b98c6c | p11@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_f469863683874454eecaf447a9d292c0 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_f469863683874454eecaf447a9d292c0 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_f469863683874454eecaf447a9d292c0 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_f469863683874454eecaf447a9d292c0 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_0c521bd07d418a5de0b56f59d0206f5e | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_0c521bd07d418a5de0b56f59d0206f5e | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_5c0683db0be6438e79f8d39324ce707f | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_5c0683db0be6438e79f8d39324ce707f | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_5c0683db0be6438e79f8d39324ce707f | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_5c0683db0be6438e79f8d39324ce707f | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_5c0683db0be6438e79f8d39324ce707f | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_5c0683db0be6438e79f8d39324ce707f | p17@RSRC1 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_b3ed11b90227b6a85d147733ff83c4b2 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_b3ed11b90227b6a85d147733ff83c4b2 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_7df8c1b9684b41b7e5adc15f214e5a15 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_7df8c1b9684b41b7e5adc15f214e5a15 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_7df8c1b9684b41b7e5adc15f214e5a15 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_7df8c1b9684b41b7e5adc15f214e5a15 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_7df8c1b9684b41b7e5adc15f214e5a15 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_7df8c1b9684b41b7e5adc15f214e5a15 | p@chr5:75913767..75913778, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_d49a2d8445dc338eeffa0fa0a94306ba | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_d49a2d8445dc338eeffa0fa0a94306ba | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_d49a2d8445dc338eeffa0fa0a94306ba | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_d49a2d8445dc338eeffa0fa0a94306ba | p23@FLT1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_82dcbbdff5a4ecacaf6fac3dc9e08d91 | p@chr8:57353666..57353675, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_6a47fa0d6e2844028686f8377e257a95 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_6a47fa0d6e2844028686f8377e257a95 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_6a47fa0d6e2844028686f8377e257a95 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_6a47fa0d6e2844028686f8377e257a95 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_6a47fa0d6e2844028686f8377e257a95 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_6a47fa0d6e2844028686f8377e257a95 | p12@FAM65C |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_a5795e36dd4f03ef2ffc955f509951ac | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_a5795e36dd4f03ef2ffc955f509951ac | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_a5795e36dd4f03ef2ffc955f509951ac | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_a5795e36dd4f03ef2ffc955f509951ac | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_8edbfd92b1dcc75b3fc58fc81933d01e | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_8edbfd92b1dcc75b3fc58fc81933d01e | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_8edbfd92b1dcc75b3fc58fc81933d01e | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_8edbfd92b1dcc75b3fc58fc81933d01e | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_4958e9a758014a641eec6473f8c05eab | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_4958e9a758014a641eec6473f8c05eab | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_4958e9a758014a641eec6473f8c05eab | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_4958e9a758014a641eec6473f8c05eab | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_4958e9a758014a641eec6473f8c05eab | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_4958e9a758014a641eec6473f8c05eab | p4@CPZ |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_c0b3ccb5c487eb258e9d461c2c7adba0 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_c0b3ccb5c487eb258e9d461c2c7adba0 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_03f9359e4ff7fe9831f030f903c194f0 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_03f9359e4ff7fe9831f030f903c194f0 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_3c86616222597a0268750d6c393e3d18 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_3c86616222597a0268750d6c393e3d18 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_3c86616222597a0268750d6c393e3d18 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_3c86616222597a0268750d6c393e3d18 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_55f4859a5d5582736995c5c0e5112778 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_55f4859a5d5582736995c5c0e5112778 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_55f4859a5d5582736995c5c0e5112778 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_55f4859a5d5582736995c5c0e5112778 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_55f4859a5d5582736995c5c0e5112778 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_55f4859a5d5582736995c5c0e5112778 | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_a4c64e8954cea0067b8df8d87f74636e | p@chr8:57353804..57353821, - |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_456dc7e1ca19521e9b0889691740ab07 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_456dc7e1ca19521e9b0889691740ab07 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_456dc7e1ca19521e9b0889691740ab07 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_456dc7e1ca19521e9b0889691740ab07 | p10@ITGA8 |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_2d14e79fc030317516a63bc469865de1 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_2d14e79fc030317516a63bc469865de1 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_2d14e79fc030317516a63bc469865de1 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_2d14e79fc030317516a63bc469865de1 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_2d14e79fc030317516a63bc469865de1 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_2d14e79fc030317516a63bc469865de1 | p@chr22:28193943..28193956, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_3ba5109cc181bf496d7c4c9117a89bac | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_3ba5109cc181bf496d7c4c9117a89bac | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_b9d39c87f3cae29ab153466a71e78c1a | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_b9d39c87f3cae29ab153466a71e78c1a | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_b9d39c87f3cae29ab153466a71e78c1a | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_b9d39c87f3cae29ab153466a71e78c1a | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_b9d39c87f3cae29ab153466a71e78c1a | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_b9d39c87f3cae29ab153466a71e78c1a | p@chr8:57359975..57359992, - |
| 4.2e-29 | FFCP PHASE1:Hg19::chr1:6615468..6615485,+#_57e100f5c7d062667270ab04dcfbae96 | p1@TAS1R1 |
| 4.2e-29 | FFCP PHASE2:Hg19::chr4:151503350..151503358,+#_57e100f5c7d062667270ab04dcfbae96 | p11@MAB21L2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Intramembranous bone that forms deep in the organism.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
