UBERON:0008949: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0008949
|name=lower lobe of lung
|namespace=
|def=
|xref=FMA:7335;;ncithesaurus:Lung_Lower_Lobe;;SCTID:303549000
|is_a=UBERON:0000101
|synonym="infe...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0008949 | |||
|is_a=UBERON:0000101 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lower lobe of lung | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym="inferior lobe of lung" EXACT [UBERON:cjm];;"lobus inferior" EXACT [UBERON:cjm];;"lobus inferior pulmonis" EXACT [UBERON:cjm] | |||
|union_of= | |||
|xref=FMA:7335;;ncithesaurus:Lung_Lower_Lobe;;SCTID:303549000 | |||
}} | }} |
Latest revision as of 18:04, 12 September 2014
Name: | lower lobe of lung | ||
---|---|---|---|
Namespace: | FANTOM | ||
Xrefs: |
| ||
Synonyms: |
"inferior lobe of lung" EXACT [UBERON:cjm] "lobus inferior" EXACT [UBERON:cjm] "lobus inferior pulmonis" EXACT [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000101(lobe of lung) |
---|
Children
is a: | UBERON:0002171 (lower lobe of right lung) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008949 (lower lobe of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61 | p35@SFTPB |
5.42e-195 | FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85884987..85884992, - |
5.42e-195 | FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81374723..81374726, - |
5.42e-195 | FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61 | p@chrX:93772866..93772868, - |
5.42e-195 | FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316085..81316090, - |
5.42e-195 | FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr8:22021803..22021813, - |
5.42e-195 | FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316872..81316887, + |
5.42e-195 | FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894675..85894679, + |
5.42e-195 | FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:211117597..211117606, + |
5.42e-195 | FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894638..85894644, + |
5.42e-195 | FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81374723..81374726, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61 | p1@ENST00000425887, p1@uc002suw.1 |
5.42e-195 | FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61 | p@chrX:93772866..93772868, - |
5.42e-195 | FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316085..81316090, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr6:32148852..32148862, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61 | p35@SFTPB |
5.42e-195 | FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85884987..85884992, - |
5.42e-195 | FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr8:22021803..22021813, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:211117597..211117606, + |
5.42e-195 | FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894638..85894644, + |
5.42e-195 | FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894675..85894679, + |
5.42e-195 | FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61 | p1@ENST00000425887, p1@uc002suw.1 |
5.42e-195 | FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316872..81316887, + |
5.42e-195 | FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr6:32148852..32148862, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316764..81316776, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894661..85894668, + |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894689..85894696, + |
9.37e-99 | FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369a | p7@AGER |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316023..81316032, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374313..81374327, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021454..22021463, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374462..81374469, + |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316910..81316917, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85886515..85886520, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316311..81316313, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021526..22021532, + |
9.37e-99 | FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32148869..32148878, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374819..81374828, + |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81315944..81315951, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22020994..22020998, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316041..81316047, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374331..81374339, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021482..22021493, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369a | p12@SFTPC |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369a | p40@SFTPB |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369a | p23@SFTPB |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316132..81316137, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374587..81374595, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021903..22021951, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369a | p13@SFTPC |
9.37e-99 | FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32149013..32149018, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374313..81374327, + |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316753..81316759, - |
9.37e-99 | FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369a | p2@ENST00000488425, p2@uc003ejj.2 |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316910..81316917, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85885348..85885355, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894689..85894696, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316311..81316313, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374752..81374761, + |
9.37e-99 | FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369a | p10@ROS1 |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021454..22021463, + |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85889234..85889238, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:23631651..23631656, + |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316558..81316565, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369a | p12@SFTPC |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894661..85894668, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81315944..81315951, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374331..81374339, + |
9.37e-99 | FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369a | p7@AGER |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85886515..85886520, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316764..81316776, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316023..81316032, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021482..22021493, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316132..81316137, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374462..81374469, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021526..22021532, + |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374587..81374595, + |
9.37e-99 | FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32148869..32148878, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369a | p40@SFTPB |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316753..81316759, - |
9.37e-99 | FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021903..22021951, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374752..81374761, + |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22020994..22020998, + |
9.37e-99 | FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369a | p2@ENST00000488425, p2@uc003ejj.2 |
9.37e-99 | FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:23631651..23631656, + |
9.37e-99 | FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369a | p10@ROS1 |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85885348..85885355, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369a | p23@SFTPB |
9.37e-99 | FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316558..81316565, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374819..81374828, + |
9.37e-99 | FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316041..81316047, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85889234..85889238, - |
9.37e-99 | FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369a | p13@SFTPC |
9.37e-99 | FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32149013..32149018, - |
2.55e-98 | FFCP PHASE2:Hg19::chr2:120303717..120303738,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr2:120303717..120303738, + |
2.55e-98 | FFCP PHASE2:Hg19::chr2:85886640..85886647,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr2:85886640..85886647, + |
2.55e-98 | FFCP PHASE1:Hg19::chr6:8358321..8358327,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr6:8358321..8358327, + |
2.55e-98 | FFCP PHASE2:Hg19::chr4:173916869..173916878,-#_bd96bd1d505d70f043b9cea613b68d24 | p3@uc003isx.1 |
2.55e-98 | FFCP PHASE2:Hg19::chr14:36921583..36921586,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr14:36921583..36921586, + |
2.55e-98 | FFCP PHASE2:Hg19::chr12:96223975..96224010,-#_bd96bd1d505d70f043b9cea613b68d24 | p@chr12:96223975..96224010, - |