FFCP PHASE1:Hg19::chr10:105670710..105670720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105670710..105670720,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:105670710..105670720,- | |description=CAGE_peak_at_chr10:105670710..105670720,- | ||
|id=chr10:105670710..105670720,- | |id=chr10:105670710..105670720,- | ||
|ontology_enrichment_celltype=CL:0002057!4.97e-15!42;CL:0000860!6.91e-14!45;CL:0000893!3.23e-12!2;CL:0002489!3.23e-12!2;CL:0000809!3.23e-12!2;CL:0000808!3.23e-12!2;CL:0000894!3.23e-12!2;CL:0000806!3.23e-12!2;CL:0000807!3.23e-12!2;CL:0000805!3.23e-12!2;CL:0002425!3.23e-12!2;CL:0002087!7.64e-12!119;CL:0000738!7.68e-11!140;CL:0000037!3.58e-09!172;CL:0000566!3.58e-09!172;CL:0002194!3.83e-09!63;CL:0000576!3.83e-09!63;CL:0000040!3.83e-09!63;CL:0000559!3.83e-09!63;CL:0002009!8.37e-09!65;CL:0000766!9.52e-09!76;CL:0002031!1.35e-08!124;CL:0000988!1.91e-08!182;CL:0000842!2.19e-08!3;CL:0000839!4.86e-08!70;CL:0000557!6.70e-08!71;CL:0000791!1.03e-07!18;CL:0000789!1.03e-07!18;CL:0002420!1.03e-07!18;CL:0002419!1.03e-07!18;CL:0000790!1.03e-07!18;CL:0002032!1.42e-07!165;CL:0000837!1.42e-07!165;CL:0000810!4.57e-07!1;CL:0000895!4.57e-07!1;CL:0002436!4.57e-07!1;CL:0002427!4.57e-07!1;CL:0002428!4.57e-07!1;CL:0002429!4.57e-07!1;CL:0002433!4.57e-07!1;CL:0002431!4.57e-07!1;CL:0002432!4.57e-07!1;CL:0002127!8.18e-07!1;CL:0000914!8.18e-07!1;CL:0000911!8.18e-07!1;CL:0000814!8.18e-07!1;CL:0002042!8.18e-07!1;CL:0002039!8.18e-07!1;CL:0002040!8.18e-07!1;CL:0002041!8.18e-07!1 | |ontology_enrichment_celltype=CL:0002057!4.97e-15!42;CL:0000860!6.91e-14!45;CL:0000893!3.23e-12!2;CL:0002489!3.23e-12!2;CL:0000809!3.23e-12!2;CL:0000808!3.23e-12!2;CL:0000894!3.23e-12!2;CL:0000806!3.23e-12!2;CL:0000807!3.23e-12!2;CL:0000805!3.23e-12!2;CL:0002425!3.23e-12!2;CL:0002087!7.64e-12!119;CL:0000738!7.68e-11!140;CL:0000037!3.58e-09!172;CL:0000566!3.58e-09!172;CL:0002194!3.83e-09!63;CL:0000576!3.83e-09!63;CL:0000040!3.83e-09!63;CL:0000559!3.83e-09!63;CL:0002009!8.37e-09!65;CL:0000766!9.52e-09!76;CL:0002031!1.35e-08!124;CL:0000988!1.91e-08!182;CL:0000842!2.19e-08!3;CL:0000839!4.86e-08!70;CL:0000557!6.70e-08!71;CL:0000791!1.03e-07!18;CL:0000789!1.03e-07!18;CL:0002420!1.03e-07!18;CL:0002419!1.03e-07!18;CL:0000790!1.03e-07!18;CL:0002032!1.42e-07!165;CL:0000837!1.42e-07!165;CL:0000810!4.57e-07!1;CL:0000895!4.57e-07!1;CL:0002436!4.57e-07!1;CL:0002427!4.57e-07!1;CL:0002428!4.57e-07!1;CL:0002429!4.57e-07!1;CL:0002433!4.57e-07!1;CL:0002431!4.57e-07!1;CL:0002432!4.57e-07!1;CL:0002127!8.18e-07!1;CL:0000914!8.18e-07!1;CL:0000911!8.18e-07!1;CL:0000814!8.18e-07!1;CL:0002042!8.18e-07!1;CL:0002039!8.18e-07!1;CL:0002040!8.18e-07!1;CL:0002041!8.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-18;33!CL:0002057;2.11e-18;33!CL:0000473;3.93e-13;39!CL:0000234;3.93e-13;39!CL:0000576;2.88e-11;48!CL:0000775;6.78e-08;3!CL:0000766;6.99e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.81e-17,42;CL:0002057,4.81e-17,42;CL:0000473,6.52e-15,48;CL:0000234,6.52e-15,48;CL:0000766,3.78e-13,72;CL:0002194,6.41e-12,59;CL:0000576,6.41e-12,59;CL:0000040,6.41e-12,59;CL:0000559,6.41e-12,59;CL:0002009,1.56e-11,61;CL:0000839,1.15e-10,66;CL:0000557,1.66e-10,67;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0000775,7.26e-08,3;CL:0000738,7.27e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-14!102;UBERON:0003061!2.05e-14!102;UBERON:0002193!8.41e-13!112;UBERON:0004177!1.10e-07!7;UBERON:0001154!4.85e-07!1;UBERON:0001153!4.85e-07!1;UBERON:0002405!5.14e-07!115;UBERON:0002371!8.46e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!2.05e-14!102;UBERON:0003061!2.05e-14!102;UBERON:0002193!8.41e-13!112;UBERON:0004177!1.10e-07!7;UBERON:0001154!4.85e-07!1;UBERON:0001153!4.85e-07!1;UBERON:0002405!5.14e-07!115;UBERON:0002371!8.46e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.89e-09,76;UBERON:0001474,1.38e-08,82;UBERON:0004765,8.12e-08,90;UBERON:0002405,1.46e-07,93;UBERON:0002390,3.59e-07,98;UBERON:0003061,3.59e-07,98;UBERON:0001434,5.02e-07,100 | |||
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|short_description=p@chr10:105670710..105670720,- | |short_description=p@chr10:105670710..105670720,- | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105670710..105670720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105670710..105670720, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.81e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.81e-17 | 42 |
defensive cell | 6.52e-15 | 48 |
phagocyte | 6.52e-15 | 48 |
myeloid leukocyte | 3.78e-13 | 72 |
monopoietic cell | 6.41e-12 | 59 |
monocyte | 6.41e-12 | 59 |
monoblast | 6.41e-12 | 59 |
promonocyte | 6.41e-12 | 59 |
macrophage dendritic cell progenitor | 1.56e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-10 | 66 |
granulocyte monocyte progenitor cell | 1.66e-10 | 67 |
myeloid cell | 1.02e-08 | 108 |
common myeloid progenitor | 1.02e-08 | 108 |
neutrophil | 7.26e-08 | 3 |
leukocyte | 7.27e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.89e-09 | 76 |
bone element | 1.38e-08 | 82 |
skeletal element | 8.12e-08 | 90 |
immune system | 1.46e-07 | 93 |
hematopoietic system | 3.59e-07 | 98 |
blood island | 3.59e-07 | 98 |
skeletal system | 5.02e-07 | 100 |