FFCP PHASE1:Hg19::chr10:106111406..106111417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:106111406..106111417,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:106111406..106111417,+ | |description=CAGE_peak_at_chr10:106111406..106111417,+ | ||
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|ontology_enrichment_celltype=CL:0002057!2.70e-83!42;CL:0000860!2.38e-77!45;CL:0000766!1.48e-65!76;CL:0002009!2.27e-63!65;CL:0000557!1.23e-61!71;CL:0002194!1.05e-56!63;CL:0000576!1.05e-56!63;CL:0000040!1.05e-56!63;CL:0000559!1.05e-56!63;CL:0000839!2.35e-54!70;CL:0000763!1.98e-48!112;CL:0000049!1.98e-48!112;CL:0000738!5.33e-45!140;CL:0000037!2.28e-35!172;CL:0000566!2.28e-35!172;CL:0002087!2.52e-34!119;CL:0000988!4.77e-33!182;CL:0002031!9.57e-33!124;CL:0002032!9.28e-31!165;CL:0000837!9.28e-31!165;CL:0000842!4.04e-15!3;CL:0000134!2.76e-13!358;CL:0002320!6.86e-13!365;CL:0000771!1.18e-11!2;CL:0000219!1.71e-11!390;CL:0000224!1.78e-11!4;CL:0001014!6.78e-11!2;CL:0001016!6.78e-11!2;CL:0000094!2.53e-10!8;CL:0000034!3.89e-10!444;CL:0000048!8.06e-10!430;CL:0000723!1.40e-09!436;CL:0000080!8.27e-08!6;CL:0000081!1.58e-07!11 | |ontology_enrichment_celltype=CL:0002057!2.70e-83!42;CL:0000860!2.38e-77!45;CL:0000766!1.48e-65!76;CL:0002009!2.27e-63!65;CL:0000557!1.23e-61!71;CL:0002194!1.05e-56!63;CL:0000576!1.05e-56!63;CL:0000040!1.05e-56!63;CL:0000559!1.05e-56!63;CL:0000839!2.35e-54!70;CL:0000763!1.98e-48!112;CL:0000049!1.98e-48!112;CL:0000738!5.33e-45!140;CL:0000037!2.28e-35!172;CL:0000566!2.28e-35!172;CL:0002087!2.52e-34!119;CL:0000988!4.77e-33!182;CL:0002031!9.57e-33!124;CL:0002032!9.28e-31!165;CL:0000837!9.28e-31!165;CL:0000842!4.04e-15!3;CL:0000134!2.76e-13!358;CL:0002320!6.86e-13!365;CL:0000771!1.18e-11!2;CL:0000219!1.71e-11!390;CL:0000224!1.78e-11!4;CL:0001014!6.78e-11!2;CL:0001016!6.78e-11!2;CL:0000094!2.53e-10!8;CL:0000034!3.89e-10!444;CL:0000048!8.06e-10!430;CL:0000723!1.40e-09!436;CL:0000080!8.27e-08!6;CL:0000081!1.58e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.34e-76;33!CL:0002057;4.34e-76;33!CL:0000473;1.42e-52;39!CL:0000234;1.42e-52;39!CL:0000576;3.97e-44;48!CL:0000766;1.32e-25;69!CL:0000771;2.65e-17;2!CL:0000763;1.61e-12;100!CL:0002087;2.04e-12;104!CL:0000738;9.35e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;4.34e-76;33!CL:0002057;4.34e-76;33!CL:0000473;1.42e-52;39!CL:0000234;1.42e-52;39!CL:0000576;3.97e-44;48!CL:0000766;1.32e-25;69!CL:0000771;2.65e-17;2!CL:0000763;1.61e-12;100!CL:0002087;2.04e-12;104!CL:0000738;9.35e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.50e-80,42;CL:0002057,2.50e-80,42;CL:0000473,7.03e-70,48;CL:0000234,7.03e-70,48;CL:0002009,8.71e-59,61;CL:0002194,3.05e-55,59;CL:0000576,3.05e-55,59;CL:0000040,3.05e-55,59;CL:0000559,3.05e-55,59;CL:0000766,2.22e-54,72;CL:0000557,2.67e-53,67;CL:0000839,4.03e-49,66;CL:0000763,1.17e-38,108;CL:0000049,1.17e-38,108;CL:0000738,5.09e-30,136;CL:0002031,2.00e-28,120;CL:0002087,6.36e-27,115;CL:0002032,8.03e-25,161;CL:0000837,8.03e-25,161;CL:0000037,1.22e-23,168;CL:0000988,2.95e-22,177;CL:0000771,2.65e-17,2;CL:0000134,3.14e-09,354;CL:0002320,5.66e-09,361;CL:0000219,4.54e-08,386;CL:0000034,1.73e-07,441;CL:0000048,5.84e-07,427;CL:0000723,8.31e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.49e-57;42!CL:0000049;5.26e-09;108 | |ontology_enrichment_development_v019=CL:0002057;5.49e-57;42!CL:0000049;5.26e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.53e-54!80;UBERON:0002390!3.14e-50!102;UBERON:0003061!3.14e-50!102;UBERON:0001474!6.79e-50!86;UBERON:0002193!3.49e-45!112;UBERON:0004765!1.33e-41!101;UBERON:0001434!1.33e-41!101;UBERON:0002405!8.57e-36!115;UBERON:0002204!1.10e-22!167;UBERON:0003081!3.13e-20!216;UBERON:0002384!2.38e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!4.53e-54!80;UBERON:0002390!3.14e-50!102;UBERON:0003061!3.14e-50!102;UBERON:0001474!6.79e-50!86;UBERON:0002193!3.49e-45!112;UBERON:0004765!1.33e-41!101;UBERON:0001434!1.33e-41!101;UBERON:0002405!8.57e-36!115;UBERON:0002204!1.10e-22!167;UBERON:0003081!3.13e-20!216;UBERON:0002384!2.38e-12!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-46,76;UBERON:0001474,4.79e-43,82;UBERON:0004765,5.88e-39,90;UBERON:0002405,1.33e-37,93;UBERON:0002390,1.58e-35,98;UBERON:0003061,1.58e-35,98;UBERON:0001434,9.40e-35,100;UBERON:0002193,6.05e-32,108;UBERON:0002204,1.83e-19,167;UBERON:0003081,2.23e-15,203;UBERON:0002384,1.27e-08,371;UBERON:0000926,1.39e-08,315;UBERON:0004120,1.39e-08,315;UBERON:0006603,1.39e-08,315 | |||
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|short_description=p@chr10:106111406..106111417,+ | |short_description=p@chr10:106111406..106111417,+ | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p@chr10:106111406..106111417, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106111406..106111417, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.50e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.50e-80 | 42 |
defensive cell | 7.03e-70 | 48 |
phagocyte | 7.03e-70 | 48 |
macrophage dendritic cell progenitor | 8.71e-59 | 61 |
monopoietic cell | 3.05e-55 | 59 |
monocyte | 3.05e-55 | 59 |
monoblast | 3.05e-55 | 59 |
promonocyte | 3.05e-55 | 59 |
myeloid leukocyte | 2.22e-54 | 72 |
granulocyte monocyte progenitor cell | 2.67e-53 | 67 |
myeloid lineage restricted progenitor cell | 4.03e-49 | 66 |
myeloid cell | 1.17e-38 | 108 |
common myeloid progenitor | 1.17e-38 | 108 |
leukocyte | 5.09e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 2.00e-28 | 120 |
nongranular leukocyte | 6.36e-27 | 115 |
hematopoietic oligopotent progenitor cell | 8.03e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.03e-25 | 161 |
hematopoietic stem cell | 1.22e-23 | 168 |
hematopoietic cell | 2.95e-22 | 177 |
eosinophil | 2.65e-17 | 2 |
mesenchymal cell | 3.14e-09 | 354 |
connective tissue cell | 5.66e-09 | 361 |
motile cell | 4.54e-08 | 386 |
stem cell | 1.73e-07 | 441 |
multi fate stem cell | 5.84e-07 | 427 |
somatic stem cell | 8.31e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-46 | 76 |
bone element | 4.79e-43 | 82 |
skeletal element | 5.88e-39 | 90 |
immune system | 1.33e-37 | 93 |
hematopoietic system | 1.58e-35 | 98 |
blood island | 1.58e-35 | 98 |
skeletal system | 9.40e-35 | 100 |
hemolymphoid system | 6.05e-32 | 108 |
musculoskeletal system | 1.83e-19 | 167 |
lateral plate mesoderm | 2.23e-15 | 203 |
connective tissue | 1.27e-08 | 371 |
mesoderm | 1.39e-08 | 315 |
mesoderm-derived structure | 1.39e-08 | 315 |
presumptive mesoderm | 1.39e-08 | 315 |