FFCP PHASE1:Hg19::chr10:1094998..1095041,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_uc001igd.2_5end | |||
|cluster_id=chr10:1094998..1095041,+ | |||
|coexpression_cluster_id=C265 | |||
|description=CAGE_peak_1_at_uc001igd.2_5end | |||
|id=chr10:1094998..1095041,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.14e-24!42;CL:0000860!1.75e-20!45;CL:0000738!7.71e-17!140;CL:0000766!2.76e-16!76;CL:0000557!1.48e-13!71;CL:0002031!1.84e-12!124;CL:0000839!2.82e-12!70;CL:0002009!1.31e-11!65;CL:0002087!1.65e-11!119;CL:0000037!1.70e-11!172;CL:0000566!1.70e-11!172;CL:0002194!6.86e-11!63;CL:0000576!6.86e-11!63;CL:0000040!6.86e-11!63;CL:0000559!6.86e-11!63;CL:0000988!5.25e-10!182;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000763!8.17e-09!112;CL:0000049!8.17e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.39e-18;33!CL:0002057;7.39e-18;33!CL:0000576;3.53e-13;48!CL:0000473;1.83e-12;39!CL:0000234;1.83e-12;39!CL:0000766;8.95e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.51e-24,42;CL:0002057,6.51e-24,42;CL:0000473,7.91e-20,48;CL:0000234,7.91e-20,48;CL:0000766,8.25e-19,72;CL:0000738,2.94e-18,136;CL:0000557,7.07e-16,67;CL:0000839,1.86e-14,66;CL:0002009,8.23e-14,61;CL:0002031,1.07e-13,120;CL:0002194,4.86e-13,59;CL:0000576,4.86e-13,59;CL:0000040,4.86e-13,59;CL:0000559,4.86e-13,59;CL:0002087,1.05e-12,115;CL:0000037,1.32e-12,168;CL:0000988,4.98e-11,177;CL:0002032,1.04e-10,161;CL:0000837,1.04e-10,161;CL:0000763,2.97e-10,108;CL:0000049,2.97e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.82e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-17!57;UBERON:0005068!2.02e-17!57;UBERON:0006241!2.02e-17!57;UBERON:0007135!2.02e-17!57;UBERON:0001017!5.44e-16!82;UBERON:0005743!6.38e-15!86;UBERON:0002780!1.28e-14!41;UBERON:0001890!1.28e-14!41;UBERON:0006240!1.28e-14!41;UBERON:0003080!1.35e-14!42;UBERON:0007023!2.34e-14!115;UBERON:0002616!6.46e-14!59;UBERON:0000955!1.94e-13!69;UBERON:0006238!1.94e-13!69;UBERON:0000073!9.49e-13!94;UBERON:0001016!9.49e-13!94;UBERON:0002390!1.46e-12!102;UBERON:0003061!1.46e-12!102;UBERON:0002020!4.05e-12!34;UBERON:0003528!4.05e-12!34;UBERON:0001893!7.01e-12!34;UBERON:0002193!9.11e-12!112;UBERON:0002791!1.12e-11!33;UBERON:0002371!2.04e-11!80;UBERON:0001869!7.33e-11!32;UBERON:0001474!1.12e-09!86;UBERON:0003075!2.15e-08!86;UBERON:0007284!2.15e-08!86;UBERON:0002346!2.85e-08!90;UBERON:0000956!3.09e-08!25;UBERON:0000203!3.09e-08!25;UBERON:0003056!1.03e-07!61;UBERON:0002619!1.14e-07!22;UBERON:0002405!1.23e-07!115;UBERON:0004765!4.53e-07!101;UBERON:0001434!4.53e-07!101;UBERON:0001950!7.36e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.30e-11;41!UBERON:0001890;5.30e-11;41!UBERON:0001893;1.29e-10;34!UBERON:0003528;1.81e-10;34!UBERON:0002020;1.81e-10;34!UBERON:0002791;2.58e-10;32!UBERON:0001869;4.53e-10;32!UBERON:0000073;7.26e-10;53!UBERON:0002616;7.26e-10;53!UBERON:0000956;2.84e-08;25!UBERON:0000203;2.84e-08;25!UBERON:0002619;9.46e-08;22!UBERON:0001950;6.57e-07;20!UBERON:0001017;8.18e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.72e-17,56;UBERON:0005068,1.72e-17,56;UBERON:0006241,1.72e-17,56;UBERON:0007135,1.72e-17,56;UBERON:0000073,2.21e-16,53;UBERON:0002616,2.21e-16,53;UBERON:0001017,7.01e-16,81;UBERON:0002780,1.12e-14,41;UBERON:0001890,1.12e-14,41;UBERON:0003080,1.12e-14,41;UBERON:0006240,1.12e-14,41;UBERON:0002390,4.59e-14,98;UBERON:0003061,4.59e-14,98;UBERON:0007023,1.05e-13,114;UBERON:0001016,2.31e-13,89;UBERON:0000955,2.53e-13,68;UBERON:0006238,2.53e-13,68;UBERON:0002371,2.60e-13,76;UBERON:0002193,4.09e-13,108;UBERON:0003528,3.64e-12,34;UBERON:0002020,3.64e-12,34;UBERON:0001893,6.32e-12,34;UBERON:0001474,2.23e-11,82;UBERON:0002791,3.16e-11,32;UBERON:0001869,6.67e-11,32;UBERON:0002405,9.86e-11,93;UBERON:0003075,2.41e-10,82;UBERON:0007284,2.41e-10,82;UBERON:0002346,3.77e-10,86;UBERON:0004765,1.46e-09,90;UBERON:0000956,2.89e-08,25;UBERON:0000203,2.89e-08,25;UBERON:0003056,4.99e-08,61;UBERON:0002619,1.07e-07,22;UBERON:0001434,2.28e-07,100;UBERON:0001950,6.98e-07,20 | |||
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| |||
|short_description=p1@uc001igd.2 | |||
}} |
Latest revision as of 10:13, 23 July 2015
Short description: | p1@uc001igd.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001igd.2_5end |
Coexpression cluster: | C265_CD4_Eosinophils_CD14_Natural_CD19_Basophils_CD8 |
Association with transcript: | 1bp_to_uc001igd.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.51e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-24 | 42 |
defensive cell | 7.91e-20 | 48 |
phagocyte | 7.91e-20 | 48 |
myeloid leukocyte | 8.25e-19 | 72 |
leukocyte | 2.94e-18 | 136 |
granulocyte monocyte progenitor cell | 7.07e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.86e-14 | 66 |
macrophage dendritic cell progenitor | 8.23e-14 | 61 |
hematopoietic lineage restricted progenitor cell | 1.07e-13 | 120 |
monopoietic cell | 4.86e-13 | 59 |
monocyte | 4.86e-13 | 59 |
monoblast | 4.86e-13 | 59 |
promonocyte | 4.86e-13 | 59 |
nongranular leukocyte | 1.05e-12 | 115 |
hematopoietic stem cell | 1.32e-12 | 168 |
hematopoietic cell | 4.98e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.04e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-10 | 161 |
myeloid cell | 2.97e-10 | 108 |
common myeloid progenitor | 2.97e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.72e-17 | 56 |
neural rod | 1.72e-17 | 56 |
future spinal cord | 1.72e-17 | 56 |
neural keel | 1.72e-17 | 56 |
regional part of nervous system | 2.21e-16 | 53 |
regional part of brain | 2.21e-16 | 53 |
central nervous system | 7.01e-16 | 81 |
regional part of forebrain | 1.12e-14 | 41 |
forebrain | 1.12e-14 | 41 |
anterior neural tube | 1.12e-14 | 41 |
future forebrain | 1.12e-14 | 41 |
hematopoietic system | 4.59e-14 | 98 |
blood island | 4.59e-14 | 98 |
adult organism | 1.05e-13 | 114 |
nervous system | 2.31e-13 | 89 |
brain | 2.53e-13 | 68 |
future brain | 2.53e-13 | 68 |
bone marrow | 2.60e-13 | 76 |
hemolymphoid system | 4.09e-13 | 108 |
brain grey matter | 3.64e-12 | 34 |
gray matter | 3.64e-12 | 34 |
telencephalon | 6.32e-12 | 34 |
bone element | 2.23e-11 | 82 |
regional part of telencephalon | 3.16e-11 | 32 |
cerebral hemisphere | 6.67e-11 | 32 |
immune system | 9.86e-11 | 93 |
neural plate | 2.41e-10 | 82 |
presumptive neural plate | 2.41e-10 | 82 |
neurectoderm | 3.77e-10 | 86 |
skeletal element | 1.46e-09 | 90 |
cerebral cortex | 2.89e-08 | 25 |
pallium | 2.89e-08 | 25 |
pre-chordal neural plate | 4.99e-08 | 61 |
regional part of cerebral cortex | 1.07e-07 | 22 |
skeletal system | 2.28e-07 | 100 |
neocortex | 6.98e-07 | 20 |