FFCP PHASE1:Hg19::chr10:17271757..17271791,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:17271757..17271791,- to FFCP PHASE1:Hg19::chr10:17271757..17271791,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_uc001iot.1_5end | |||
|cluster_id=chr10:17271757..17271791,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_6_at_uc001iot.1_5end | |||
|id=chr10:17271757..17271791,- | |||
|ontology_enrichment_celltype=CL:0000055!2.90e-25!180;CL:0002371!2.76e-19!591;CL:0000048!1.39e-16!430;CL:0000144!8.94e-16!625;CL:0000723!1.25e-15!436;CL:0000057!5.03e-15!75;CL:0000034!9.38e-15!444;CL:0002057!2.06e-11!42;CL:0000222!3.28e-11!119;CL:0000183!1.12e-10!59;CL:0000680!1.82e-10!57;CL:0000056!1.82e-10!57;CL:0000355!1.82e-10!57;CL:0000187!6.44e-10!54;CL:0000860!1.03e-09!45;CL:0000393!9.89e-09!60;CL:0000211!9.89e-09!60;CL:0002009!1.27e-08!65;CL:0000192!1.43e-08!42;CL:0000514!1.43e-08!42;CL:0002320!1.44e-08!365;CL:0000548!1.71e-08!679;CL:0000004!1.71e-08!679;CL:0000255!1.71e-08!679;CL:0000012!2.15e-08!682;CL:0002194!2.87e-08!63;CL:0000576!2.87e-08!63;CL:0000040!2.87e-08!63;CL:0000559!2.87e-08!63;CL:0000557!1.37e-07!71;CL:0000359!1.45e-07!32;CL:0000134!2.91e-07!358;CL:0000219!3.64e-07!390;CL:0000839!7.77e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-12;33!CL:0002057;1.01e-12;33!CL:0000473;2.92e-10;39!CL:0000234;2.92e-10;39!CL:0002620;1.36e-07;23!CL:0000057;2.04e-07;73!CL:0000359;2.06e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.85e-21,427;CL:0000723,1.23e-20,433;CL:0000034,2.73e-19,441;CL:0000057,1.17e-16,76;CL:0000222,4.31e-12,121;CL:0000860,1.53e-11,42;CL:0002057,1.53e-11,42;CL:0002320,2.52e-11,361;CL:0000473,2.83e-11,48;CL:0000234,2.83e-11,48;CL:0000680,4.07e-11,58;CL:0000056,4.07e-11,58;CL:0000355,4.07e-11,58;CL:0000187,1.88e-10,55;CL:0002009,5.74e-10,61;CL:0000134,8.52e-10,354;CL:0000393,1.43e-09,61;CL:0000211,1.43e-09,61;CL:0002194,1.57e-09,59;CL:0000576,1.57e-09,59;CL:0000040,1.57e-09,59;CL:0000559,1.57e-09,59;CL:0000557,1.55e-08,67;CL:0000192,1.60e-08,43;CL:0000514,1.60e-08,43;CL:0000219,1.91e-08,386;CL:0000359,5.79e-08,32;CL:0000839,8.49e-08,66;CL:0002620,1.47e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.02e-19!167;UBERON:0003081!2.65e-16!216;UBERON:0000914!3.88e-15!83;UBERON:0002329!3.88e-15!83;UBERON:0003077!3.88e-15!83;UBERON:0003059!3.88e-15!83;UBERON:0007282!3.88e-15!83;UBERON:0009618!3.88e-15!83;UBERON:0007285!3.88e-15!83;UBERON:0004290!7.38e-14!70;UBERON:0002049!7.42e-14!79;UBERON:0007798!7.42e-14!79;UBERON:0004872!7.68e-13!84;UBERON:0000055!9.10e-13!69;UBERON:0004535!1.23e-12!110;UBERON:0001637!3.88e-12!42;UBERON:0003509!3.88e-12!42;UBERON:0004572!3.88e-12!42;UBERON:0001009!8.78e-12!113;UBERON:0000486!9.27e-12!82;UBERON:0001981!1.32e-11!60;UBERON:0007500!1.32e-11!60;UBERON:0004537!1.32e-11!60;UBERON:0006965!1.32e-11!60;UBERON:0000926!1.70e-11!448;UBERON:0004120!1.70e-11!448;UBERON:0006603!1.70e-11!448;UBERON:0001134!3.02e-10!61;UBERON:0002036!3.02e-10!61;UBERON:0003082!3.02e-10!61;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0004765!2.71e-09!101;UBERON:0001434!2.71e-09!101;UBERON:0000468!9.72e-09!659;UBERON:0002371!1.43e-08!80;UBERON:0002384!1.83e-08!375;UBERON:0004573!2.43e-08!33;UBERON:0004571!2.43e-08!33;UBERON:0001474!7.52e-08!86;UBERON:0000480!9.58e-08!626;UBERON:0000467!1.11e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.11e-10;42!UBERON:0003509;6.11e-10;42!UBERON:0004572;6.11e-10;42!UBERON:0004573;1.55e-07;33!UBERON:0004571;1.55e-07;33!UBERON:0007500;2.60e-07;56!UBERON:0001981;2.60e-07;56!UBERON:0004537;2.60e-07;56 | |||
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| ||
|short_description=p6@uc001iot.1 | |||
}} | }} |
Latest revision as of 12:14, 23 July 2015
Short description: | p6@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 191bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.85e-21 | 427 |
somatic stem cell | 1.23e-20 | 433 |
stem cell | 2.73e-19 | 441 |
fibroblast | 1.17e-16 | 76 |
mesodermal cell | 4.31e-12 | 121 |
classical monocyte | 1.53e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-11 | 42 |
connective tissue cell | 2.52e-11 | 361 |
defensive cell | 2.83e-11 | 48 |
phagocyte | 2.83e-11 | 48 |
muscle precursor cell | 4.07e-11 | 58 |
myoblast | 4.07e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.07e-11 | 58 |
muscle cell | 1.88e-10 | 55 |
macrophage dendritic cell progenitor | 5.74e-10 | 61 |
mesenchymal cell | 8.52e-10 | 354 |
electrically responsive cell | 1.43e-09 | 61 |
electrically active cell | 1.43e-09 | 61 |
monopoietic cell | 1.57e-09 | 59 |
monocyte | 1.57e-09 | 59 |
monoblast | 1.57e-09 | 59 |
promonocyte | 1.57e-09 | 59 |
granulocyte monocyte progenitor cell | 1.55e-08 | 67 |
smooth muscle cell | 1.60e-08 | 43 |
smooth muscle myoblast | 1.60e-08 | 43 |
motile cell | 1.91e-08 | 386 |
vascular associated smooth muscle cell | 5.79e-08 | 32 |
myeloid lineage restricted progenitor cell | 8.49e-08 | 66 |
skin fibroblast | 1.47e-07 | 23 |