FFCP PHASE1:Hg19::chr10:17276801..17276827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000456355_5end | |association_with_transcript=4bp_to_ENST00000456355_5end | ||
|cluster_id=chr10:17276801..17276827,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_5_at_ENST00000456355_5end | |description=CAGE_peak_5_at_ENST00000456355_5end | ||
|id=chr10:17276801..17276827,- | |id=chr10:17276801..17276827,- | ||
|ontology_enrichment_celltype=CL:0000055!1.35e-24!180;CL:0002371!3.98e-22!591;CL:0000144!1.51e-20!625;CL:0000048!2.41e-17!430;CL:0000723!3.04e-16!436;CL:0000034!2.06e-15!444;CL:0000057!3.06e-15!75;CL:0000548!2.42e-14!679;CL:0000004!2.42e-14!679;CL:0000255!2.42e-14!679;CL:0000012!2.85e-14!682;CL:0000222!7.24e-13!119;CL:0000680!2.68e-10!57;CL:0000056!2.68e-10!57;CL:0000355!2.68e-10!57;CL:0000183!2.81e-10!59;CL:0000187!9.07e-10!54;CL:0002320!1.51e-09!365;CL:0000003!1.76e-09!722;CL:0000393!4.74e-09!60;CL:0000211!4.74e-09!60;CL:0002620!2.96e-08!23;CL:0000192!3.37e-08!42;CL:0000514!3.37e-08!42;CL:0000134!4.36e-08!358;CL:0000219!8.59e-08!390 | |ontology_enrichment_celltype=CL:0000055!1.35e-24!180;CL:0002371!3.98e-22!591;CL:0000144!1.51e-20!625;CL:0000048!2.41e-17!430;CL:0000723!3.04e-16!436;CL:0000034!2.06e-15!444;CL:0000057!3.06e-15!75;CL:0000548!2.42e-14!679;CL:0000004!2.42e-14!679;CL:0000255!2.42e-14!679;CL:0000012!2.85e-14!682;CL:0000222!7.24e-13!119;CL:0000680!2.68e-10!57;CL:0000056!2.68e-10!57;CL:0000355!2.68e-10!57;CL:0000183!2.81e-10!59;CL:0000187!9.07e-10!54;CL:0002320!1.51e-09!365;CL:0000003!1.76e-09!722;CL:0000393!4.74e-09!60;CL:0000211!4.74e-09!60;CL:0002620!2.96e-08!23;CL:0000192!3.37e-08!42;CL:0000514!3.37e-08!42;CL:0000134!4.36e-08!358;CL:0000219!8.59e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.53e-09;23!CL:0000057;1.65e-07;73!CL:0000134;6.52e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.63e-20,427;CL:0000723,5.27e-19,433;CL:0000057,7.41e-18,76;CL:0000034,1.60e-17,441;CL:0002320,6.90e-12,361;CL:0000222,1.55e-11,121;CL:0000680,1.58e-10,58;CL:0000056,1.58e-10,58;CL:0000355,1.58e-10,58;CL:0000187,2.58e-10,55;CL:0000134,4.21e-10,354;CL:0002620,2.58e-09,23;CL:0000219,3.66e-09,386;CL:0000393,8.10e-09,61;CL:0000211,8.10e-09,61;CL:0000192,9.28e-08,43;CL:0000514,9.28e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.86e-15!167;UBERON:0003081!8.56e-15!216;UBERON:0000914!6.63e-14!83;UBERON:0002329!6.63e-14!83;UBERON:0003077!6.63e-14!83;UBERON:0003059!6.63e-14!83;UBERON:0007282!6.63e-14!83;UBERON:0009618!6.63e-14!83;UBERON:0007285!6.63e-14!83;UBERON:0002049!8.41e-13!79;UBERON:0007798!8.41e-13!79;UBERON:0004290!2.16e-12!70;UBERON:0000926!5.66e-12!448;UBERON:0004120!5.66e-12!448;UBERON:0006603!5.66e-12!448;UBERON:0004872!1.73e-11!84;UBERON:0004535!1.77e-11!110;UBERON:0000486!5.60e-11!82;UBERON:0001009!8.87e-11!113;UBERON:0000055!1.48e-10!69;UBERON:0001981!3.73e-10!60;UBERON:0007500!3.73e-10!60;UBERON:0004537!3.73e-10!60;UBERON:0006965!3.73e-10!60;UBERON:0001637!7.11e-10!42;UBERON:0003509!7.11e-10!42;UBERON:0004572!7.11e-10!42;UBERON:0002384!1.29e-09!375;UBERON:0001134!1.00e-08!61;UBERON:0002036!1.00e-08!61;UBERON:0003082!1.00e-08!61;UBERON:0000468!1.02e-08!659;UBERON:0002385!3.80e-08!63;UBERON:0001015!3.80e-08!63;UBERON:0000383!3.80e-08!63;UBERON:0004573!1.24e-07!33;UBERON:0004571!1.24e-07!33;UBERON:0002199!4.57e-07!45;UBERON:0002416!4.57e-07!45;UBERON:0004765!4.59e-07!101;UBERON:0001434!4.59e-07!101;UBERON:0005256!6.62e-07!143 | |ontology_enrichment_uberon=UBERON:0002204!1.86e-15!167;UBERON:0003081!8.56e-15!216;UBERON:0000914!6.63e-14!83;UBERON:0002329!6.63e-14!83;UBERON:0003077!6.63e-14!83;UBERON:0003059!6.63e-14!83;UBERON:0007282!6.63e-14!83;UBERON:0009618!6.63e-14!83;UBERON:0007285!6.63e-14!83;UBERON:0002049!8.41e-13!79;UBERON:0007798!8.41e-13!79;UBERON:0004290!2.16e-12!70;UBERON:0000926!5.66e-12!448;UBERON:0004120!5.66e-12!448;UBERON:0006603!5.66e-12!448;UBERON:0004872!1.73e-11!84;UBERON:0004535!1.77e-11!110;UBERON:0000486!5.60e-11!82;UBERON:0001009!8.87e-11!113;UBERON:0000055!1.48e-10!69;UBERON:0001981!3.73e-10!60;UBERON:0007500!3.73e-10!60;UBERON:0004537!3.73e-10!60;UBERON:0006965!3.73e-10!60;UBERON:0001637!7.11e-10!42;UBERON:0003509!7.11e-10!42;UBERON:0004572!7.11e-10!42;UBERON:0002384!1.29e-09!375;UBERON:0001134!1.00e-08!61;UBERON:0002036!1.00e-08!61;UBERON:0003082!1.00e-08!61;UBERON:0000468!1.02e-08!659;UBERON:0002385!3.80e-08!63;UBERON:0001015!3.80e-08!63;UBERON:0000383!3.80e-08!63;UBERON:0004573!1.24e-07!33;UBERON:0004571!1.24e-07!33;UBERON:0002199!4.57e-07!45;UBERON:0002416!4.57e-07!45;UBERON:0004765!4.59e-07!101;UBERON:0001434!4.59e-07!101;UBERON:0005256!6.62e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.25e-08;14!UBERON:0001637;7.62e-08;42!UBERON:0003509;7.62e-08;42!UBERON:0004572;7.62e-08;42!UBERON:0004573;1.11e-07;33!UBERON:0004571;1.11e-07;33!UBERON:0002067;1.67e-07;9!UBERON:0002199;8.11e-07;46!UBERON:0002416;8.11e-07;46 | |||
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| ||
|short_description=p5@ENST00000456355 | |short_description=p5@ENST00000456355 | ||
}} | }} |
Latest revision as of 12:16, 23 July 2015
Short description: | p5@ENST00000456355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000456355_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 4bp_to_ENST00000456355_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.63e-20 | 427 |
somatic stem cell | 5.27e-19 | 433 |
fibroblast | 7.41e-18 | 76 |
stem cell | 1.60e-17 | 441 |
connective tissue cell | 6.90e-12 | 361 |
mesodermal cell | 1.55e-11 | 121 |
muscle precursor cell | 1.58e-10 | 58 |
myoblast | 1.58e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-10 | 58 |
muscle cell | 2.58e-10 | 55 |
mesenchymal cell | 4.21e-10 | 354 |
skin fibroblast | 2.58e-09 | 23 |
motile cell | 3.66e-09 | 386 |
electrically responsive cell | 8.10e-09 | 61 |
electrically active cell | 8.10e-09 | 61 |
smooth muscle cell | 9.28e-08 | 43 |
smooth muscle myoblast | 9.28e-08 | 43 |