FFCP PHASE1:Hg19::chr10:30876768..30876806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30876768..30876806,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30876768..30876806,- | |description=CAGE_peak_at_chr10:30876768..30876806,- | ||
|id=chr10:30876768..30876806,- | |id=chr10:30876768..30876806,- | ||
|ontology_enrichment_celltype=CL:0002057!1.39e-54!42;CL:0000860!9.94e-51!45;CL:0002194!1.08e-34!63;CL:0000576!1.08e-34!63;CL:0000040!1.08e-34!63;CL:0000559!1.08e-34!63;CL:0002009!1.53e-33!65;CL:0000839!6.04e-31!70;CL:0000557!1.81e-30!71;CL:0000766!2.83e-28!76;CL:0002087!2.51e-21!119;CL:0000763!3.43e-18!112;CL:0000049!3.43e-18!112;CL:0002031!3.51e-18!124;CL:0000738!1.34e-17!140;CL:0000988!3.12e-14!182;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0002032!8.31e-13!165;CL:0000837!8.31e-13!165;CL:0002541!1.03e-10!3 | |ontology_enrichment_celltype=CL:0002057!1.39e-54!42;CL:0000860!9.94e-51!45;CL:0002194!1.08e-34!63;CL:0000576!1.08e-34!63;CL:0000040!1.08e-34!63;CL:0000559!1.08e-34!63;CL:0002009!1.53e-33!65;CL:0000839!6.04e-31!70;CL:0000557!1.81e-30!71;CL:0000766!2.83e-28!76;CL:0002087!2.51e-21!119;CL:0000763!3.43e-18!112;CL:0000049!3.43e-18!112;CL:0002031!3.51e-18!124;CL:0000738!1.34e-17!140;CL:0000988!3.12e-14!182;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0002032!8.31e-13!165;CL:0000837!8.31e-13!165;CL:0002541!1.03e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-58;33!CL:0002057;1.12e-58;33!CL:0000473;4.60e-42;39!CL:0000234;4.60e-42;39!CL:0000576;1.17e-23;48!CL:0000766;3.72e-18;69!CL:0002087;9.16e-13;104!CL:0000763;8.53e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-51,42;CL:0002057,3.58e-51,42;CL:0000473,1.12e-44,48;CL:0000234,1.12e-44,48;CL:0002194,1.41e-35,59;CL:0000576,1.41e-35,59;CL:0000040,1.41e-35,59;CL:0000559,1.41e-35,59;CL:0002009,2.11e-34,61;CL:0000839,9.06e-32,66;CL:0000557,2.74e-31,67;CL:0000766,4.38e-29,72;CL:0000763,3.67e-19,108;CL:0000049,3.67e-19,108;CL:0002087,6.05e-18,115;CL:0002031,3.68e-17,120;CL:0000738,4.94e-15,136;CL:0002032,1.52e-12,161;CL:0000837,1.52e-12,161;CL:0000037,5.62e-12,168;CL:0000988,2.59e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.69e-34;42!CL:0000049;4.89e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-26!80;UBERON:0002390!2.08e-25!102;UBERON:0003061!2.08e-25!102;UBERON:0001474!1.22e-24!86;UBERON:0002193!7.76e-23!112;UBERON:0004765!1.61e-20!101;UBERON:0001434!1.61e-20!101;UBERON:0002405!1.24e-17!115;UBERON:0002204!4.05e-11!167;UBERON:0000476!1.03e-10!3;UBERON:0000920!1.03e-10!3;UBERON:0003081!4.17e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-27,76;UBERON:0001474,1.81e-25,82;UBERON:0004765,3.79e-23,90;UBERON:0002405,2.23e-22,93;UBERON:0002390,3.37e-21,98;UBERON:0003061,3.37e-21,98;UBERON:0001434,9.27e-21,100;UBERON:0002193,3.67e-19,108;UBERON:0002204,4.69e-12,167;UBERON:0003081,1.01e-09,203 | |||
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|short_description=p@chr10:30876768..30876806,- | |short_description=p@chr10:30876768..30876806,- | ||
}} | }} |
Latest revision as of 13:10, 23 July 2015
Short description: | p@chr10:30876768..30876806, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30876768..30876806, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.58e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.58e-51 | 42 |
defensive cell | 1.12e-44 | 48 |
phagocyte | 1.12e-44 | 48 |
monopoietic cell | 1.41e-35 | 59 |
monocyte | 1.41e-35 | 59 |
monoblast | 1.41e-35 | 59 |
promonocyte | 1.41e-35 | 59 |
macrophage dendritic cell progenitor | 2.11e-34 | 61 |
myeloid lineage restricted progenitor cell | 9.06e-32 | 66 |
granulocyte monocyte progenitor cell | 2.74e-31 | 67 |
myeloid leukocyte | 4.38e-29 | 72 |
myeloid cell | 3.67e-19 | 108 |
common myeloid progenitor | 3.67e-19 | 108 |
nongranular leukocyte | 6.05e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.68e-17 | 120 |
leukocyte | 4.94e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-12 | 161 |
hematopoietic stem cell | 5.62e-12 | 168 |
hematopoietic cell | 2.59e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.58e-27 | 76 |
bone element | 1.81e-25 | 82 |
skeletal element | 3.79e-23 | 90 |
immune system | 2.23e-22 | 93 |
hematopoietic system | 3.37e-21 | 98 |
blood island | 3.37e-21 | 98 |
skeletal system | 9.27e-21 | 100 |
hemolymphoid system | 3.67e-19 | 108 |
musculoskeletal system | 4.69e-12 | 167 |
lateral plate mesoderm | 1.01e-09 | 203 |