FFCP PHASE1:Hg19::chr10:3853815..3853851,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:3853815..3853851,+ to FFCP PHASE1:Hg19::chr10:3853815..3853851,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3853815..3853851,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3853815..3853851,+ | |||
|id=chr10:3853815..3853851,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.50e-23!42;CL:0000860!7.88e-21!45;CL:0000738!1.45e-20!140;CL:0002087!3.52e-18!119;CL:0002031!5.81e-17!124;CL:0000766!1.32e-15!76;CL:0000037!1.65e-14!172;CL:0000566!1.65e-14!172;CL:0000988!6.36e-14!182;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000839!2.49e-13!70;CL:0000557!4.74e-13!71;CL:0002194!9.85e-13!63;CL:0000576!9.85e-13!63;CL:0000040!9.85e-13!63;CL:0000559!9.85e-13!63;CL:0002009!3.68e-12!65;CL:0000763!3.81e-09!112;CL:0000049!3.81e-09!112;CL:0000623!1.02e-07!3;CL:0000825!1.02e-07!3;CL:0000767!1.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-46;33!CL:0002057;4.41e-46;33!CL:0000576;2.71e-31;48!CL:0000473;7.28e-30;39!CL:0000234;7.28e-30;39!CL:0000766;7.81e-21;69!CL:0002393;4.71e-18;6!CL:0002397;4.71e-18;6!CL:0002087;1.47e-14;104!CL:0000763;1.45e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.24e-61,42;CL:0002057,8.24e-61,42;CL:0000473,5.22e-53,48;CL:0000234,5.22e-53,48;CL:0002194,4.46e-42,59;CL:0000576,4.46e-42,59;CL:0000040,4.46e-42,59;CL:0000559,4.46e-42,59;CL:0002009,1.15e-40,61;CL:0000839,1.67e-37,66;CL:0000557,6.29e-37,67;CL:0000766,2.79e-34,72;CL:0002087,6.17e-24,115;CL:0002031,7.19e-23,120;CL:0000763,2.27e-22,108;CL:0000049,2.27e-22,108;CL:0000738,5.60e-20,136;CL:0002032,1.35e-16,161;CL:0000837,1.35e-16,161;CL:0000037,7.93e-16,168;CL:0000988,6.30e-15,177;CL:0002393,2.92e-12,9;CL:0002397,2.92e-12,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.91e-42;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.77e-12!80;UBERON:0002193!8.31e-12!112;UBERON:0002390!8.95e-11!102;UBERON:0003061!8.95e-11!102;UBERON:0001474!1.14e-10!86;UBERON:0002405!3.06e-10!115;UBERON:0004765!3.85e-08!101;UBERON:0001434!3.85e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-32,76;UBERON:0001474,6.10e-30,82;UBERON:0004765,3.74e-27,90;UBERON:0002405,3.14e-26,93;UBERON:0002390,8.17e-25,98;UBERON:0003061,8.17e-25,98;UBERON:0001434,2.75e-24,100;UBERON:0002193,2.27e-22,108;UBERON:0002204,7.55e-14,167;UBERON:0003081,4.70e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,3.32397245119126,1.60435557976113,2.82114131930607,0,0,0,0,0,0,0,0,0.309706370895104,2.01384674625505,0.768482119587302,1.89185783910868,6.55016793399575,5.16387746867061,10.8341189275473,0,0,0,10.7129362329816,8.02322567690234,14.7047538933779,0,0.199463657621632,0.426224750532694,0.870627715885752,0,0,0.502497330513487,0,1.52032191293582,2.42159801053347,2.57794345191295,3.79754864929061,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0.786021525498329,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.576479813667846,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,3.32397245119126,1.60435557976113,2.82114131930607,0,0,0,0,0,0,0,0,0.309706370895104,2.01384674625505,0.768482119587302,1.89185783910868,6.55016793399575,5.16387746867061,10.8341189275473,0,0,0,10.7129362329816,8.02322567690234,14.7047538933779,0,0.199463657621632,0.426224750532694,0.870627715885752,0,0,0.502497330513487,0,1.52032191293582,2.42159801053347,2.57794345191295,3.79754864929061,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0.786021525498329,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.576479813667846,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,1.07813787429759,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:3853815..3853851,+ | |||
}} | }} |
Latest revision as of 13:36, 23 July 2015
Short description: | p@chr10:3853815..3853851, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3853815..3853851, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.24e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.24e-61 | 42 |
defensive cell | 5.22e-53 | 48 |
phagocyte | 5.22e-53 | 48 |
monopoietic cell | 4.46e-42 | 59 |
monocyte | 4.46e-42 | 59 |
monoblast | 4.46e-42 | 59 |
promonocyte | 4.46e-42 | 59 |
macrophage dendritic cell progenitor | 1.15e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.67e-37 | 66 |
granulocyte monocyte progenitor cell | 6.29e-37 | 67 |
myeloid leukocyte | 2.79e-34 | 72 |
nongranular leukocyte | 6.17e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.19e-23 | 120 |
myeloid cell | 2.27e-22 | 108 |
common myeloid progenitor | 2.27e-22 | 108 |
leukocyte | 5.60e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-16 | 161 |
hematopoietic stem cell | 7.93e-16 | 168 |
hematopoietic cell | 6.30e-15 | 177 |
intermediate monocyte | 2.92e-12 | 9 |
CD14-positive, CD16-positive monocyte | 2.92e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-32 | 76 |
bone element | 6.10e-30 | 82 |
skeletal element | 3.74e-27 | 90 |
immune system | 3.14e-26 | 93 |
hematopoietic system | 8.17e-25 | 98 |
blood island | 8.17e-25 | 98 |
skeletal system | 2.75e-24 | 100 |
hemolymphoid system | 2.27e-22 | 108 |
musculoskeletal system | 7.55e-14 | 167 |
lateral plate mesoderm | 4.70e-11 | 203 |