FFCP PHASE1:Hg19::chr10:560037..560049,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:560037..560049,- | |||
|coexpression_cluster_id=C138 | |coexpression_cluster_id=C138 | ||
|description=CAGE_peak_at_chr10:560037..560049,- | |description=CAGE_peak_at_chr10:560037..560049,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000819!8.62e-12!1;CL:0000945!6.21e-07!24;CL:0000826!6.21e-07!24 | |ontology_enrichment_celltype=CL:0000819!8.62e-12!1;CL:0000945!6.21e-07!24;CL:0000826!6.21e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000785;9.37e-99;1!CL:0000819;9.37e-99;1!CL:0002535;4.52e-50;2!CL:0000236;5.28e-09;13 | |ontology_enrichment_celltype_v019=CL:0000785;9.37e-99;1!CL:0000819;9.37e-99;1!CL:0002535;4.52e-50;2!CL:0000236;5.28e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.37e-99,1;CL:0000785,2.74e-50,2;CL:0000955,2.74e-50,2;CL:0000818,2.74e-50,2;CL:0000954,2.74e-50,2;CL:0000816,2.74e-50,2;CL:0002535,4.52e-50,2;CL:0000817,4.27e-34,3;CL:0000236,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-50;2 | |ontology_enrichment_development_v019=CL:0000954;2.74e-50;2 | ||
|ontology_enrichment_disease=DOID:0060073!8.62e-12!1;DOID:8675!8.62e-12!1;DOID:0060058!9.28e-10!10 | |ontology_enrichment_disease=DOID:0060073!8.62e-12!1;DOID:8675!8.62e-12!1;DOID:0060058!9.28e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.37e-99;1!DOID:8675;9.37e-99;1!DOID:4362;5.15e-21;5!DOID:0060058;2.73e-11;10 | |ontology_enrichment_disease_v019=DOID:0060073;9.37e-99;1!DOID:8675;9.37e-99;1!DOID:4362;5.15e-21;5!DOID:0060058;2.73e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.37e-99,1;DOID:8675,9.37e-99,1;DOID:4362,5.15e-21,5;DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002240!1.98e-14!3;UBERON:0002171!1.06e-11!1;UBERON:0006518!1.06e-11!1;UBERON:0008949!1.06e-11!1;UBERON:0000101!1.06e-11!1;UBERON:0002167!1.06e-11!1;UBERON:0002336!3.63e-11!1;UBERON:0001018!3.63e-11!1;UBERON:0002473!3.63e-11!1;UBERON:0005340!3.63e-11!1;UBERON:0002316!3.63e-11!1;UBERON:0003544!3.63e-11!1;UBERON:0001020!3.63e-11!1;UBERON:0005970!3.63e-11!1;UBERON:0002437!3.63e-11!1;UBERON:0001882!6.00e-11!1;UBERON:0005403!6.00e-11!1;UBERON:0005174!5.07e-09!5;UBERON:0001137!5.07e-09!5;UBERON:0000349!9.95e-09!5;UBERON:0001049!1.02e-07!57;UBERON:0005068!1.02e-07!57;UBERON:0006241!1.02e-07!57;UBERON:0007135!1.02e-07!57;UBERON:0002791!3.54e-07!33;UBERON:0001893!5.74e-07!34 | |ontology_enrichment_uberon=UBERON:0002240!1.98e-14!3;UBERON:0002171!1.06e-11!1;UBERON:0006518!1.06e-11!1;UBERON:0008949!1.06e-11!1;UBERON:0000101!1.06e-11!1;UBERON:0002167!1.06e-11!1;UBERON:0002336!3.63e-11!1;UBERON:0001018!3.63e-11!1;UBERON:0002473!3.63e-11!1;UBERON:0005340!3.63e-11!1;UBERON:0002316!3.63e-11!1;UBERON:0003544!3.63e-11!1;UBERON:0001020!3.63e-11!1;UBERON:0005970!3.63e-11!1;UBERON:0002437!3.63e-11!1;UBERON:0001882!6.00e-11!1;UBERON:0005403!6.00e-11!1;UBERON:0005174!5.07e-09!5;UBERON:0001137!5.07e-09!5;UBERON:0000349!9.95e-09!5;UBERON:0001049!1.02e-07!57;UBERON:0005068!1.02e-07!57;UBERON:0006241!1.02e-07!57;UBERON:0007135!1.02e-07!57;UBERON:0002791!3.54e-07!33;UBERON:0001893!5.74e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.52e-50;2!UBERON:0004801;4.52e-50;2!UBERON:0000002;9.07e-18;6!UBERON:0001560;9.07e-18;6!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0006955;4.52e-50;2!UBERON:0004801;4.52e-50;2!UBERON:0000002;9.07e-18;6!UBERON:0001560;9.07e-18;6!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,3.27512572210559,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,24.9963061225462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,3.27512572210559,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,24.9963061225462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:560037..560049,- | |short_description=p@chr10:560037..560049,- | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p@chr10:560037..560049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:560037..560049, - |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.37e-99 | 1 |
mature B cell | 2.74e-50 | 2 |
pre-B-II cell | 2.74e-50 | 2 |
transitional stage B cell | 2.74e-50 | 2 |
small pre-B-II cell | 2.74e-50 | 2 |
immature B cell | 2.74e-50 | 2 |
epithelial cell of cervix | 4.52e-50 | 2 |
precursor B cell | 4.27e-34 | 3 |
B cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.37e-99 | 1 |
lymphosarcoma | 9.37e-99 | 1 |
cervical cancer | 5.15e-21 | 5 |
lymphoma | 2.73e-11 | 10 |