FFCP PHASE1:Hg19::chr10:64003338..64003349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64003338..64003349,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:64003338..64003349,+ | |description=CAGE_peak_at_chr10:64003338..64003349,+ | ||
|id=chr10:64003338..64003349,+ | |id=chr10:64003338..64003349,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.64e-51!42;CL:0000860!9.38e-47!45;CL:0002009!5.20e-39!65;CL:0002194!2.52e-38!63;CL:0000576!2.52e-38!63;CL:0000040!2.52e-38!63;CL:0000559!2.52e-38!63;CL:0000557!8.59e-35!71;CL:0000839!1.98e-33!70;CL:0000766!6.84e-32!76;CL:0000763!1.23e-20!112;CL:0000049!1.23e-20!112;CL:0002087!1.59e-17!119;CL:0002031!2.28e-15!124;CL:0000738!3.03e-15!140;CL:0000048!7.31e-12!430;CL:0000723!1.92e-11!436;CL:0000037!3.40e-11!172;CL:0000566!3.40e-11!172;CL:0000034!6.69e-11!444;CL:0002032!1.34e-10!165;CL:0000837!1.34e-10!165;CL:0000134!3.09e-10!358;CL:0000988!5.27e-10!182;CL:0002320!9.77e-10!365;CL:0002371!5.07e-09!591;CL:0000219!5.70e-09!390;CL:0000144!1.81e-08!625;CL:0002622!3.09e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.64e-51!42;CL:0000860!9.38e-47!45;CL:0002009!5.20e-39!65;CL:0002194!2.52e-38!63;CL:0000576!2.52e-38!63;CL:0000040!2.52e-38!63;CL:0000559!2.52e-38!63;CL:0000557!8.59e-35!71;CL:0000839!1.98e-33!70;CL:0000766!6.84e-32!76;CL:0000763!1.23e-20!112;CL:0000049!1.23e-20!112;CL:0002087!1.59e-17!119;CL:0002031!2.28e-15!124;CL:0000738!3.03e-15!140;CL:0000048!7.31e-12!430;CL:0000723!1.92e-11!436;CL:0000037!3.40e-11!172;CL:0000566!3.40e-11!172;CL:0000034!6.69e-11!444;CL:0002032!1.34e-10!165;CL:0000837!1.34e-10!165;CL:0000134!3.09e-10!358;CL:0000988!5.27e-10!182;CL:0002320!9.77e-10!365;CL:0002371!5.07e-09!591;CL:0000219!5.70e-09!390;CL:0000144!1.81e-08!625;CL:0002622!3.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-114;33!CL:0002057;5.53e-114;33!CL:0000473;3.66e-78;39!CL:0000234;3.66e-78;39!CL:0000576;9.41e-57;48!CL:0000766;8.66e-31;69!CL:0002087;1.86e-15;104!CL:0000763;2.77e-14;100!CL:0000738;3.57e-09;136!CL:0002581;1.78e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.78e-106,42;CL:0002057,1.78e-106,42;CL:0000473,1.08e-92,48;CL:0000234,1.08e-92,48;CL:0002194,2.17e-73,59;CL:0000576,2.17e-73,59;CL:0000040,2.17e-73,59;CL:0000559,2.17e-73,59;CL:0002009,6.74e-71,61;CL:0000839,2.56e-65,66;CL:0000557,2.67e-64,67;CL:0000766,1.25e-59,72;CL:0000763,1.25e-38,108;CL:0000049,1.25e-38,108;CL:0002087,4.69e-36,115;CL:0002031,2.12e-34,120;CL:0000738,6.58e-30,136;CL:0002032,1.16e-24,161;CL:0000837,1.16e-24,161;CL:0000037,1.81e-23,168;CL:0000988,4.52e-22,177;CL:0000134,5.00e-11,354;CL:0002320,9.96e-11,361;CL:0000219,1.13e-09,386;CL:0002581,1.91e-08,1;CL:0000048,2.22e-08,427;CL:0000723,3.36e-08,433;CL:0000034,5.71e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.04e-78;42!CL:0000049;5.85e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.19e-29!80;UBERON:0001474!7.95e-27!86;UBERON:0002390!3.71e-25!102;UBERON:0003061!3.71e-25!102;UBERON:0004765!3.54e-24!101;UBERON:0001434!3.54e-24!101;UBERON:0002193!3.72e-23!112;UBERON:0002405!8.49e-21!115;UBERON:0002204!1.21e-19!167;UBERON:0003081!2.34e-11!216;UBERON:0002384!4.65e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!1.19e-29!80;UBERON:0001474!7.95e-27!86;UBERON:0002390!3.71e-25!102;UBERON:0003061!3.71e-25!102;UBERON:0004765!3.54e-24!101;UBERON:0001434!3.54e-24!101;UBERON:0002193!3.72e-23!112;UBERON:0002405!8.49e-21!115;UBERON:0002204!1.21e-19!167;UBERON:0003081!2.34e-11!216;UBERON:0002384!4.65e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-56,76;UBERON:0001474,5.66e-52,82;UBERON:0004765,4.66e-47,90;UBERON:0002405,1.98e-45,93;UBERON:0002390,6.20e-43,98;UBERON:0003061,6.20e-43,98;UBERON:0001434,5.26e-42,100;UBERON:0002193,1.25e-38,108;UBERON:0002204,1.24e-23,167;UBERON:0003081,1.00e-18,203;UBERON:0000926,1.44e-10,315;UBERON:0004120,1.44e-10,315;UBERON:0006603,1.44e-10,315;UBERON:0002384,2.55e-10,371 | |||
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|short_description=p@chr10:64003338..64003349,+ | |short_description=p@chr10:64003338..64003349,+ | ||
}} | }} |
Latest revision as of 14:38, 23 July 2015
Short description: | p@chr10:64003338..64003349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64003338..64003349, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.78e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-106 | 42 |
defensive cell | 1.08e-92 | 48 |
phagocyte | 1.08e-92 | 48 |
monopoietic cell | 2.17e-73 | 59 |
monocyte | 2.17e-73 | 59 |
monoblast | 2.17e-73 | 59 |
promonocyte | 2.17e-73 | 59 |
macrophage dendritic cell progenitor | 6.74e-71 | 61 |
myeloid lineage restricted progenitor cell | 2.56e-65 | 66 |
granulocyte monocyte progenitor cell | 2.67e-64 | 67 |
myeloid leukocyte | 1.25e-59 | 72 |
myeloid cell | 1.25e-38 | 108 |
common myeloid progenitor | 1.25e-38 | 108 |
nongranular leukocyte | 4.69e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-34 | 120 |
leukocyte | 6.58e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.16e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-24 | 161 |
hematopoietic stem cell | 1.81e-23 | 168 |
hematopoietic cell | 4.52e-22 | 177 |
mesenchymal cell | 5.00e-11 | 354 |
connective tissue cell | 9.96e-11 | 361 |
motile cell | 1.13e-09 | 386 |
perirenal preadipocyte | 1.91e-08 | 1 |
multi fate stem cell | 2.22e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 5.71e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-56 | 76 |
bone element | 5.66e-52 | 82 |
skeletal element | 4.66e-47 | 90 |
immune system | 1.98e-45 | 93 |
hematopoietic system | 6.20e-43 | 98 |
blood island | 6.20e-43 | 98 |
skeletal system | 5.26e-42 | 100 |
hemolymphoid system | 1.25e-38 | 108 |
musculoskeletal system | 1.24e-23 | 167 |
lateral plate mesoderm | 1.00e-18 | 203 |
mesoderm | 1.44e-10 | 315 |
mesoderm-derived structure | 1.44e-10 | 315 |
presumptive mesoderm | 1.44e-10 | 315 |
connective tissue | 2.55e-10 | 371 |