FFCP PHASE1:Hg19::chr10:73578407..73578437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73578407..73578437,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr10:73578407..73578437,- | |description=CAGE_peak_at_chr10:73578407..73578437,- | ||
|id=chr10:73578407..73578437,- | |id=chr10:73578407..73578437,- | ||
|ontology_enrichment_celltype=CL:0002194!2.91e-26!63;CL:0000576!2.91e-26!63;CL:0000040!2.91e-26!63;CL:0000559!2.91e-26!63;CL:0002057!3.01e-25!42;CL:0002009!1.65e-24!65;CL:0000766!3.29e-24!76;CL:0000839!1.68e-22!70;CL:0000860!1.75e-22!45;CL:0000557!1.62e-21!71;CL:0000763!6.65e-10!112;CL:0000049!6.65e-10!112 | |ontology_enrichment_celltype=CL:0002194!2.91e-26!63;CL:0000576!2.91e-26!63;CL:0000040!2.91e-26!63;CL:0000559!2.91e-26!63;CL:0002057!3.01e-25!42;CL:0002009!1.65e-24!65;CL:0000766!3.29e-24!76;CL:0000839!1.68e-22!70;CL:0000860!1.75e-22!45;CL:0000557!1.62e-21!71;CL:0000763!6.65e-10!112;CL:0000049!6.65e-10!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.92e-32;39!CL:0000234;1.92e-32;39!CL:0000860;3.52e-32;33!CL:0002057;3.52e-32;33!CL:0000576;5.78e-26;48!CL:0000766;1.15e-18;69!CL:0000763;4.05e-08;100!CL:0000235;5.77e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.21e-48,59;CL:0000576,6.21e-48,59;CL:0000040,6.21e-48,59;CL:0000559,6.21e-48,59;CL:0000473,1.32e-47,48;CL:0000234,1.32e-47,48;CL:0002009,1.24e-45,61;CL:0000766,4.14e-43,72;CL:0000860,7.17e-41,42;CL:0002057,7.17e-41,42;CL:0000839,1.67e-40,66;CL:0000557,1.43e-39,67;CL:0000763,6.28e-23,108;CL:0000049,6.28e-23,108;CL:0002087,1.24e-17,115;CL:0000738,2.39e-15,136;CL:0002031,4.25e-14,120;CL:0000988,4.29e-10,177;CL:0000037,1.06e-09,168;CL:0002032,1.62e-09,161;CL:0000837,1.62e-09,161;CL:0002320,1.64e-08,361;CL:0000134,3.26e-08,354;CL:0000235,5.19e-08,6;CL:0000219,1.30e-07,386;CL:0002393,4.01e-07,9;CL:0002397,4.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-29;42!CL:0000049;4.70e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.02e-18!80;UBERON:0002390!1.18e-17!102;UBERON:0003061!1.18e-17!102;UBERON:0001474!4.81e-17!86;UBERON:0002193!5.50e-17!112;UBERON:0002405!1.07e-14!115;UBERON:0004765!1.09e-14!101;UBERON:0001434!1.09e-14!101;UBERON:0003081!1.08e-12!216;UBERON:0000926!1.01e-08!448;UBERON:0004120!1.01e-08!448;UBERON:0006603!1.01e-08!448;UBERON:0000062!8.06e-08!511;UBERON:0000468!1.31e-07!659;UBERON:0002204!6.16e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-33,76;UBERON:0002390,3.46e-32,98;UBERON:0003061,3.46e-32,98;UBERON:0001474,1.42e-30,82;UBERON:0002193,4.24e-30,108;UBERON:0004765,7.83e-27,90;UBERON:0002405,1.40e-26,93;UBERON:0001434,1.45e-25,100;UBERON:0003081,1.92e-25,203;UBERON:0000926,3.07e-18,315;UBERON:0004120,3.07e-18,315;UBERON:0006603,3.07e-18,315;UBERON:0002204,6.99e-14,167;UBERON:0002384,1.53e-08,371 | |||
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| ||
|short_description=p@chr10:73578407..73578437,- | |short_description=p@chr10:73578407..73578437,- | ||
}} | }} |
Latest revision as of 15:18, 23 July 2015
Short description: | p@chr10:73578407..73578437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73578407..73578437, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.21e-48 | 59 |
monocyte | 6.21e-48 | 59 |
monoblast | 6.21e-48 | 59 |
promonocyte | 6.21e-48 | 59 |
defensive cell | 1.32e-47 | 48 |
phagocyte | 1.32e-47 | 48 |
macrophage dendritic cell progenitor | 1.24e-45 | 61 |
myeloid leukocyte | 4.14e-43 | 72 |
classical monocyte | 7.17e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.17e-41 | 42 |
myeloid lineage restricted progenitor cell | 1.67e-40 | 66 |
granulocyte monocyte progenitor cell | 1.43e-39 | 67 |
myeloid cell | 6.28e-23 | 108 |
common myeloid progenitor | 6.28e-23 | 108 |
nongranular leukocyte | 1.24e-17 | 115 |
leukocyte | 2.39e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 4.25e-14 | 120 |
hematopoietic cell | 4.29e-10 | 177 |
hematopoietic stem cell | 1.06e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.62e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-09 | 161 |
connective tissue cell | 1.64e-08 | 361 |
mesenchymal cell | 3.26e-08 | 354 |
macrophage | 5.19e-08 | 6 |
motile cell | 1.30e-07 | 386 |
intermediate monocyte | 4.01e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.01e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-33 | 76 |
hematopoietic system | 3.46e-32 | 98 |
blood island | 3.46e-32 | 98 |
bone element | 1.42e-30 | 82 |
hemolymphoid system | 4.24e-30 | 108 |
skeletal element | 7.83e-27 | 90 |
immune system | 1.40e-26 | 93 |
skeletal system | 1.45e-25 | 100 |
lateral plate mesoderm | 1.92e-25 | 203 |
mesoderm | 3.07e-18 | 315 |
mesoderm-derived structure | 3.07e-18 | 315 |
presumptive mesoderm | 3.07e-18 | 315 |
musculoskeletal system | 6.99e-14 | 167 |
connective tissue | 1.53e-08 | 371 |