FFCP PHASE1:Hg19::chr11:119396200..119396212,+: Difference between revisions
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|id=chr11:119396200..119396212,+
|short_description=p@chr11:119396200..119396212,+
|description=CAGE_peak_at_chr11:119396200..119396212,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:119396200..119396212,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:119396200..119396212,+ | |||
|id=chr11:119396200..119396212,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.56e-107!42;CL:0000860!8.60e-100!45;CL:0002194!1.70e-68!63;CL:0000576!1.70e-68!63;CL:0000040!1.70e-68!63;CL:0000559!1.70e-68!63;CL:0002009!3.00e-66!65;CL:0000839!3.49e-61!70;CL:0000557!2.96e-60!71;CL:0000766!4.03e-60!76;CL:0002087!4.47e-48!119;CL:0000738!1.09e-42!140;CL:0000763!4.11e-39!112;CL:0000049!4.11e-39!112;CL:0002031!2.59e-37!124;CL:0000037!1.18e-33!172;CL:0000566!1.18e-33!172;CL:0000988!1.78e-31!182;CL:0002032!1.19e-28!165;CL:0000837!1.19e-28!165;CL:0002393!5.75e-23!9;CL:0002397!5.75e-23!9;CL:0000842!1.91e-17!3;CL:0000134!5.20e-14!358;CL:0002320!1.28e-13!365;CL:0000224!3.20e-13!4;CL:0000219!3.10e-12!390;CL:0000048!1.41e-10!430;CL:0000723!2.42e-10!436;CL:0000034!4.89e-10!444;CL:0000080!5.63e-09!6;CL:0000623!6.04e-08!3;CL:0000825!6.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.09e-87;6!CL:0002397;1.09e-87;6!CL:0000226;2.45e-12;3!CL:0000842;2.45e-12;3!CL:0000576;1.93e-11;48!CL:0000766;1.69e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.45e-59,9;CL:0002397,7.45e-59,9;CL:0000860,4.46e-20,42;CL:0002057,4.46e-20,42;CL:0000473,1.22e-17,48;CL:0000234,1.22e-17,48;CL:0002194,3.22e-14,59;CL:0000576,3.22e-14,59;CL:0000040,3.22e-14,59;CL:0000559,3.22e-14,59;CL:0002009,8.92e-14,61;CL:0000839,8.75e-13,66;CL:0000557,1.33e-12,67;CL:0000226,2.59e-12,3;CL:0000842,2.59e-12,3;CL:0000766,9.00e-12,72;CL:0002087,1.15e-10,115;CL:0000738,4.36e-09,136;CL:0000763,5.11e-08,108;CL:0000049,5.11e-08,108;CL:0000037,2.00e-07,168;CL:0002031,2.95e-07,120;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.31e-53!80;UBERON:0002390!3.77e-50!102;UBERON:0003061!3.77e-50!102;UBERON:0001474!6.99e-49!86;UBERON:0002193!3.50e-45!112;UBERON:0004765!6.43e-44!101;UBERON:0001434!6.43e-44!101;UBERON:0002405!3.19e-35!115;UBERON:0002204!2.40e-24!167;UBERON:0003081!1.31e-20!216;UBERON:0002384!4.39e-13!375;UBERON:0000926!2.01e-07!448;UBERON:0004120!2.01e-07!448;UBERON:0006603!2.01e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0002193,2.52e-11,108;UBERON:0002371,3.49e-11,76;UBERON:0001474,2.09e-10,82;UBERON:0004765,1.58e-09,90;UBERON:0002405,3.08e-09,93;UBERON:0001434,1.27e-08,100 | |||
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|short_description=p@chr11:119396200..119396212,+ | |||
}} | }} |
Latest revision as of 19:03, 23 July 2015
Short description: | p@chr11:119396200..119396212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119396200..119396212, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 7.45e-59 | 9 |
CD14-positive, CD16-positive monocyte | 7.45e-59 | 9 |
classical monocyte | 4.46e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-20 | 42 |
defensive cell | 1.22e-17 | 48 |
phagocyte | 1.22e-17 | 48 |
monopoietic cell | 3.22e-14 | 59 |
monocyte | 3.22e-14 | 59 |
monoblast | 3.22e-14 | 59 |
promonocyte | 3.22e-14 | 59 |
macrophage dendritic cell progenitor | 8.92e-14 | 61 |
myeloid lineage restricted progenitor cell | 8.75e-13 | 66 |
granulocyte monocyte progenitor cell | 1.33e-12 | 67 |
single nucleate cell | 2.59e-12 | 3 |
mononuclear cell | 2.59e-12 | 3 |
myeloid leukocyte | 9.00e-12 | 72 |
nongranular leukocyte | 1.15e-10 | 115 |
leukocyte | 4.36e-09 | 136 |
myeloid cell | 5.11e-08 | 108 |
common myeloid progenitor | 5.11e-08 | 108 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 2.95e-07 | 120 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
hemolymphoid system | 2.52e-11 | 108 |
bone marrow | 3.49e-11 | 76 |
bone element | 2.09e-10 | 82 |
skeletal element | 1.58e-09 | 90 |
immune system | 3.08e-09 | 93 |
skeletal system | 1.27e-08 | 100 |