FFCP PHASE1:Hg19::chr11:1213502..1213512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=412bp_to_uc001lsz.2_5end | |association_with_transcript=412bp_to_uc001lsz.2_5end | ||
|cluster_id=chr11:1213502..1213512,+ | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_6_at_uc001lsz.2_5end | |description=CAGE_peak_6_at_uc001lsz.2_5end | ||
|id=chr11:1213502..1213512,+ | |id=chr11:1213502..1213512,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.91e-19;1 | |||
|ontology_enrichment_disease=DOID:3111!9.84e-11!1;DOID:3603!9.84e-11!1 | |ontology_enrichment_disease=DOID:3111!9.84e-11!1;DOID:3603!9.84e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.88e-19;1!DOID:3603;1.88e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.88e-19,1;DOID:3603,1.88e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.15e-12!7;UBERON:0001173!3.15e-12!7;UBERON:0004912!3.15e-12!7;UBERON:0002114!1.12e-11!12;UBERON:0002171!1.19e-10!1;UBERON:0006518!1.19e-10!1;UBERON:0008949!1.19e-10!1;UBERON:0000101!1.19e-10!1;UBERON:0002167!1.19e-10!1;UBERON:0002108!3.82e-10!14;UBERON:0002336!4.75e-10!1;UBERON:0001018!4.75e-10!1;UBERON:0002473!4.75e-10!1;UBERON:0005340!4.75e-10!1;UBERON:0002316!4.75e-10!1;UBERON:0003544!4.75e-10!1;UBERON:0001020!4.75e-10!1;UBERON:0005970!4.75e-10!1;UBERON:0002437!4.75e-10!1;UBERON:0002394!6.54e-10!4;UBERON:0003928!6.54e-10!4;UBERON:0001264!6.16e-09!10;UBERON:0003922!6.16e-09!10;UBERON:0003923!6.16e-09!10;UBERON:0003924!6.16e-09!10;UBERON:0003921!6.16e-09!10;UBERON:0002075!1.84e-08!18;UBERON:0001045!3.62e-08!11;UBERON:0004921!8.90e-07!129;UBERON:0004185!8.90e-07!129;UBERON:0000077!9.02e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.91e-19;1!UBERON:0006518;3.91e-19;1!UBERON:0008949;3.91e-19;1!UBERON:0000101;3.91e-19;1!UBERON:0002167;3.91e-19;1!UBERON:0003127;2.99e-10;2!UBERON:0002075;1.01e-09;18!UBERON:0001264;2.72e-08;10!UBERON:0000922;9.16e-08;49!UBERON:0002114;2.32e-07;2!UBERON:0002110;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.71e-19,1;UBERON:0006518,2.71e-19,1;UBERON:0008949,2.71e-19,1;UBERON:0000101,2.71e-19,1;UBERON:0002167,2.71e-19,1;UBERON:0003127,2.99e-10,2;UBERON:0002075,9.82e-10,18;UBERON:0001264,2.72e-08,10;UBERON:0002114,2.47e-07,2;UBERON:0002110,2.79e-07,3;UBERON:0006242,2.79e-07,3 | |||
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|short_description=p6@uc001lsz.2 | |short_description=p6@uc001lsz.2 | ||
}} | }} |
Latest revision as of 19:12, 23 July 2015
Short description: | p6@uc001lsz.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_uc001lsz.2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 412bp_to_uc001lsz.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.71e-19 | 1 |
right lung lobe | 2.71e-19 | 1 |
lower lobe of lung | 2.71e-19 | 1 |
lobe of lung | 2.71e-19 | 1 |
right lung | 2.71e-19 | 1 |
open tracheal system trachea | 2.99e-10 | 2 |
viscus | 9.82e-10 | 18 |
pancreas | 2.72e-08 | 10 |
duodenum | 2.47e-07 | 2 |
gallbladder | 2.79e-07 | 3 |
gall bladder primordium | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.88e-19 | 1 |
mucinous cystadenocarcinoma | 1.88e-19 | 1 |