FFCP PHASE1:Hg19::chr11:128838838..128838867,-: Difference between revisions
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|id=chr11:128838838..128838867,-
|short_description=p@chr11:128838838..128838867,-
|description=CAGE_peak_at_chr11:128838838..128838867,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:128838838..128838867,- | |||
|description=CAGE_peak_at_chr11:128838838..128838867,- | |||
|id=chr11:128838838..128838867,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;4.22e-21;1!CL:0002625;4.22e-21;1!CL:0000216;4.22e-21;1!CL:0000123;3.02e-11;2!CL:0000242;3.02e-11;2!CL:0002541;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.45e-21,1;CL:0002625,3.45e-21,1;CL:0000216,3.45e-21,1;CL:0000242,3.70e-11,2;CL:0002541,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.72e-27;3!UBERON:0005425;4.22e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.73e-19!57;UBERON:0005068!4.73e-19!57;UBERON:0006241!4.73e-19!57;UBERON:0007135!4.73e-19!57;UBERON:0002020!4.56e-17!34;UBERON:0003528!4.56e-17!34;UBERON:0002780!8.66e-17!41;UBERON:0001890!8.66e-17!41;UBERON:0006240!8.66e-17!41;UBERON:0001893!9.11e-17!34;UBERON:0001017!1.09e-16!82;UBERON:0000955!1.65e-16!69;UBERON:0006238!1.65e-16!69;UBERON:0003080!3.56e-16!42;UBERON:0000073!3.70e-16!94;UBERON:0001016!3.70e-16!94;UBERON:0002791!4.17e-16!33;UBERON:0002616!1.38e-15!59;UBERON:0005743!2.76e-15!86;UBERON:0001869!3.89e-15!32;UBERON:0002346!2.39e-13!90;UBERON:0002619!3.77e-13!22;UBERON:0001950!4.24e-13!20;UBERON:0007023!6.44e-13!115;UBERON:0003075!4.38e-12!86;UBERON:0007284!4.38e-12!86;UBERON:0003056!3.37e-11!61;UBERON:0000956!5.53e-11!25;UBERON:0000203!5.53e-11!25;UBERON:0000924!4.66e-10!173;UBERON:0006601!4.66e-10!173;UBERON:0000033!1.41e-09!123;UBERON:0000153!1.74e-09!129;UBERON:0007811!1.74e-09!129;UBERON:0004121!4.23e-09!169;UBERON:0000200!2.35e-08!6;UBERON:0002308!5.97e-08!9;UBERON:0000125!5.97e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.22e-21;1!UBERON:0000941;4.22e-21;1!UBERON:0001343;4.22e-21;1!UBERON:0001785;4.22e-21;1!UBERON:0002464;4.22e-21;1!UBERON:0004904;4.22e-21;1!UBERON:0001021;4.22e-21;1!UBERON:0004910;4.22e-21;1!UBERON:0004813;4.22e-21;1!UBERON:0000200;2.49e-14;6!UBERON:0002771;1.82e-11;2!UBERON:0003714;3.02e-11;2!UBERON:0002702;3.02e-11;2!UBERON:0005162;3.02e-11;2!UBERON:0000122;3.02e-11;2!UBERON:0004909;3.02e-11;2!UBERON:0001950;3.35e-09;20!UBERON:0002619;1.88e-08;22!UBERON:0001870;6.34e-08;3!UBERON:0003124;6.34e-08;3!UBERON:0000920;6.34e-08;3!UBERON:0000956;1.53e-07;25!UBERON:0000203;1.53e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.45e-21,1;UBERON:0001343,3.45e-21,1;UBERON:0004910,3.45e-21,1;UBERON:0005154,3.45e-21,1;UBERON:0005295,3.45e-21,1;UBERON:0004813,3.45e-21,1;UBERON:0005297,3.45e-21,1;UBERON:0005294,3.45e-21,1;UBERON:0010141,3.45e-21,1;UBERON:0005891,3.45e-21,1;UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0000200,2.04e-14,6;UBERON:0000966,2.66e-14,6;UBERON:0005388,2.66e-14,6;UBERON:0001802,2.66e-14,6;UBERON:0002771,1.82e-11,2;UBERON:0002702,2.23e-11,2;UBERON:0004909,2.73e-11,2;UBERON:0003714,3.02e-11,2;UBERON:0005162,3.02e-11,2;UBERON:0000122,3.02e-11,2;UBERON:0001950,2.91e-09,20;UBERON:0002619,1.65e-08,22;UBERON:0003056,3.34e-08,61;UBERON:0001870,5.18e-08,3;UBERON:0000920,8.29e-08,3;UBERON:0000956,1.36e-07,25;UBERON:0000203,1.36e-07,25;UBERON:0010371,9.46e-07,104 | |||
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| ||
|short_description=p@chr11:128838838..128838867,- | |||
}} | }} |
Latest revision as of 19:54, 23 July 2015
Short description: | p@chr11:128838838..128838867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128838838..128838867, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.45e-21 | 1 |
seminiferous tubule epithelial cell | 3.45e-21 | 1 |
Sertoli cell | 3.45e-21 | 1 |
Merkel cell | 3.70e-11 | 2 |
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.45e-21 | 1 |
seminiferous tubule of testis | 3.45e-21 | 1 |
epithelium of male gonad | 3.45e-21 | 1 |
epithelial cord | 3.45e-21 | 1 |
sex cord | 3.45e-21 | 1 |
seminiferous tubule epithelium | 3.45e-21 | 1 |
testis sex cord | 3.45e-21 | 1 |
genital ridge | 3.45e-21 | 1 |
primitive sex cord of indifferent gonad | 3.45e-21 | 1 |
coelomic epithelium | 3.45e-21 | 1 |
cranial nerve II | 4.22e-21 | 1 |
cranial nerve | 4.22e-21 | 1 |
nerve trunk | 4.22e-21 | 1 |
nerve connecting eye with brain | 4.22e-21 | 1 |
nerve | 4.22e-21 | 1 |
retinal neural layer | 4.22e-21 | 1 |
presumptive neural retina | 4.22e-21 | 1 |
gyrus | 2.04e-14 | 6 |
retina | 2.66e-14 | 6 |
photoreceptor array | 2.66e-14 | 6 |
posterior segment of eyeball | 2.66e-14 | 6 |
middle temporal gyrus | 1.82e-11 | 2 |
middle frontal gyrus | 2.23e-11 | 2 |
epithelium of gonad | 2.73e-11 | 2 |
neural tissue | 3.02e-11 | 2 |
multi cell component structure | 3.02e-11 | 2 |
neuron projection bundle | 3.02e-11 | 2 |
neocortex | 2.91e-09 | 20 |
regional part of cerebral cortex | 1.65e-08 | 22 |
pre-chordal neural plate | 3.34e-08 | 61 |
frontal cortex | 5.18e-08 | 3 |
egg chorion | 8.29e-08 | 3 |
cerebral cortex | 1.36e-07 | 25 |
pallium | 1.36e-07 | 25 |
ecto-epithelium | 9.46e-07 | 104 |