FFCP PHASE1:Hg19::chr11:2017367..2017398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:2017367..2017398,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_at_chr11:2017367..2017398,+ | |||
|id=chr11:2017367..2017398,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.83e-08!9;CL:0000349!5.01e-07!3;CL:0002577!5.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.61e-29;19!CL:0002577;5.34e-15;3!CL:0002536;1.12e-10;2!CL:0002575;6.39e-10;2!CL:0002537;1.16e-09;5!CL:0002541;8.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.25e-29,19;CL:0002577,4.32e-15,3;CL:0002536,1.06e-10,2;CL:0002575,3.50e-10,2;CL:0002537,1.16e-09,5;CL:0002541,8.83e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.44e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.69e-19!14;UBERON:0000158!5.69e-19!14;UBERON:0001737!1.12e-16!9;UBERON:0000478!1.09e-15!24;UBERON:0001557!3.85e-14!19;UBERON:0003124!1.71e-13!7;UBERON:0001987!1.17e-08!4;UBERON:0004340!1.17e-08!4;UBERON:0004923!4.28e-08!57;UBERON:0000305!1.33e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.30e-31;24!UBERON:0001737;2.33e-31;9!UBERON:0001557;2.33e-31;9!UBERON:0005631;1.12e-23;10!UBERON:0000158;1.12e-23;10!UBERON:0001987;4.43e-19;4!UBERON:0000305;1.37e-17;7!UBERON:0005406;2.40e-10;2!UBERON:0000072;3.72e-08;37!UBERON:0003124;8.82e-08;3!UBERON:0000920;8.82e-08;3!UBERON:0001723;2.11e-07;3!UBERON:0001033;2.11e-07;3!UBERON:0000065;9.62e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.13e-40,14;UBERON:0000158,4.13e-40,14;UBERON:0000478,1.24e-31,24;UBERON:0001737,4.14e-31,9;UBERON:0003124,1.90e-24,7;UBERON:0001557,2.24e-22,19;UBERON:0001987,4.04e-19,4;UBERON:0004340,4.04e-19,4;UBERON:0000305,1.32e-17,7;UBERON:0004871,2.27e-15,8;UBERON:0005406,2.40e-10,2;UBERON:0000072,9.30e-10,47;UBERON:0004923,1.43e-09,66;UBERON:0008947,3.05e-08,38;UBERON:0003258,3.05e-08,38;UBERON:0000065,3.17e-08,54;UBERON:0000920,8.83e-08,3;UBERON:0001041,1.69e-07,87;UBERON:0001723,1.92e-07,3;UBERON:0001033,1.92e-07,3;UBERON:0010056,1.92e-07,3;UBERON:0004119,4.79e-07,160;UBERON:0000925,4.79e-07,160;UBERON:0006595,4.79e-07,160 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0,0,0,2.40285509343189,4.74780560811216,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,1.30137480043828,1.18009283054671,1.20505514941741,1.54411561825352,3.05031221729369,0.949082476444386,2.15730093056263,2.35465758150415,1.53898862778556,0,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,13.5655401347861,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0,0,1.95801157462741,1.71571711905428,0,0,0,8.48757200049526,1.66435439510497,3.93107381328584,0,0,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0.767518373630648,0.413509717453592,0.107420244868274,0.435050081742686,0.170453254832202,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.392996164052485,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,9.78852387424529,8.01804638248124,10.7506245734731,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.897576444097721,0.869178975376065,15.3120556671321,0.0915975934018623,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,16.0515529459758,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,7.79257477370308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54156465530744,0,0,0,0,0,0,2.61906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0.560544326627578,2.73947616152849,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0.647428837187895,0.718639647993729,2.3196288626764,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.90451545170992,0,0.0620747142958579,0,0,1.0105859447911,0,5.81796611844978,0,0,3.99192427855216,0,0,0,0,2.34640942403454,0,2.03448089157869,0,0.201273793591026,0 | |||
|short_description=p@chr11:2017367..2017398,+ | |||
}} |
Latest revision as of 20:54, 23 July 2015
Short description: | p@chr11:2017367..2017398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2017367..2017398, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.25e-29 | 19 |
placental epithelial cell | 4.32e-15 | 3 |
amniotic epithelial cell | 1.06e-10 | 2 |
central nervous system pericyte | 3.50e-10 | 2 |
amnion mesenchymal stem cell | 1.16e-09 | 5 |
chorionic membrane mesenchymal stem cell | 8.83e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.13e-40 | 14 |
membranous layer | 4.13e-40 | 14 |
extraembryonic structure | 1.24e-31 | 24 |
larynx | 4.14e-31 | 9 |
chorion | 1.90e-24 | 7 |
upper respiratory tract | 2.24e-22 | 19 |
placenta | 4.04e-19 | 4 |
allantois | 4.04e-19 | 4 |
amnion | 1.32e-17 | 7 |
somatic layer of lateral plate mesoderm | 2.27e-15 | 8 |
perirenal fat | 2.40e-10 | 2 |
segment of respiratory tract | 9.30e-10 | 47 |
organ component layer | 1.43e-09 | 66 |
respiratory primordium | 3.05e-08 | 38 |
endoderm of foregut | 3.05e-08 | 38 |
respiratory tract | 3.17e-08 | 54 |
egg chorion | 8.83e-08 | 3 |
foregut | 1.69e-07 | 87 |
tongue | 1.92e-07 | 3 |
gustatory system | 1.92e-07 | 3 |
future tongue | 1.92e-07 | 3 |
endoderm-derived structure | 4.79e-07 | 160 |
endoderm | 4.79e-07 | 160 |
presumptive endoderm | 4.79e-07 | 160 |