FFCP PHASE1:Hg19::chr11:2159935..2159950,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-64bp_to_BC017277_5end | |association_with_transcript=-64bp_to_BC017277_5end | ||
|cluster_id=chr11:2159935..2159950,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_5_at_BC017277_5end | |description=CAGE_peak_5_at_BC017277_5end | ||
|id=chr11:2159935..2159950,+ | |id=chr11:2159935..2159950,+ | ||
|ontology_enrichment_celltype=CL:0000349;2.23e-24;19!CL:0002541;1.69e-11;3!CL:0002577;5.88e-11;3!CL:0002575;2.88e-08;2!CL:0002536;5.20e-08;2!CL:0002537;3.59e-07;5!CL:0002549;4.68e-07;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;2.23e-24;19!CL:0002541;1.69e-11;3!CL:0002577;5.88e-11;3!CL:0002575;2.88e-08;2!CL:0002536;5.20e-08;2!CL:0002537;3.59e-07;5!CL:0002549;4.68e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.26e-24,19;CL:0002541,1.58e-11,3;CL:0002577,6.62e-11,3;CL:0002575,2.94e-08,2;CL:0002536,5.11e-08,2;CL:0002537,3.56e-07,5;CL:0002549,6.85e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.78e-08;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;1.08e-25;24!UBERON:0005631;6.34e-22;10!UBERON:0000158;6.34e-22;10!UBERON:0001987;4.59e-14;4!UBERON:0000305;9.15e-13;7!UBERON:0003124;1.69e-11;3!UBERON:0000920;1.69e-11;3!UBERON:0000922;3.53e-08;49!UBERON:0005629;4.68e-07;2!UBERON:0005358;4.68e-07;2!UBERON:0001886;4.68e-07;2!UBERON:0004086;4.68e-07;2!UBERON:0005282;4.68e-07;2!UBERON:0005281;4.68e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.24e-15!14;UBERON:0000158!4.24e-15!14;UBERON:0000478!1.36e-13!24;UBERON:0003124!3.12e-11!7;UBERON:0001987!5.61e-07!4;UBERON:0004340!5.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.08e-25;24!UBERON:0005631;6.34e-22;10!UBERON:0000158;6.34e-22;10!UBERON:0001987;4.59e-14;4!UBERON:0000305;9.15e-13;7!UBERON:0003124;1.69e-11;3!UBERON:0000920;1.69e-11;3!UBERON:0000922;3.53e-08;49!UBERON:0005629;4.68e-07;2!UBERON:0005358;4.68e-07;2!UBERON:0001886;4.68e-07;2!UBERON:0004086;4.68e-07;2!UBERON:0005282;4.68e-07;2!UBERON:0005281;4.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.30e-34,14;UBERON:0000158,5.30e-34,14;UBERON:0000478,1.08e-25,24;UBERON:0003124,8.28e-24,7;UBERON:0001987,5.00e-14,4;UBERON:0004340,5.00e-14,4;UBERON:0000305,8.95e-13,7;UBERON:0000920,1.58e-11,3;UBERON:0004871,3.98e-11,8;UBERON:0004923,3.71e-08,66;UBERON:0005629,6.85e-07,2;UBERON:0005358,6.85e-07,2;UBERON:0001886,6.85e-07,2;UBERON:0004086,6.85e-07,2;UBERON:0005282,6.85e-07,2;UBERON:0005281,6.85e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,7.8638893966862,10.8144461073666,0,0.662794751455832,0,0,0,0,0,1.02000345622126,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,1.05950199351452,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,4.5505722260952,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,0,0,0.285955987316295,21.1622426102663,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,2.0694614258501,0,0,0,11.356467132839,25.3926133620033,0,0,0,3.33440328590885,3.32870879020994,24.4936137597041,0,0,0,0,0,0,0,0,0,0,0,0,7.37242642508896,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0,0.460511024178389,0,0,0,0.170453254832202,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,1.46290121726877,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0.329294892959902,0,0.699869440489966,0,0,0,0.753150406214233,1.29151611801369,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,37.4828841038173,24.648068509109,31.3303916141217,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,2.53620294826866,0,0,38.2801391678303,3.57230614267263,63.9641731222362,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,25.6824847135612,0,0,0,0,0,6.04953580243319,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0,0,0,0,0,0,0.999048047910651,0,0,8.75134489096019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,2.21705459206197,0,0,8.19345095995126,10.9613091646951,10.3127422096903,3.34653437150146,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.46872846777995,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,34.4517911171775,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,1.56302802246618,0,0,0.147856086217045,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,7.98321331463749,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0.560544326627578,2.73947616152849,0,0,0.428859265059938,0,0,5.9111812582877,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.307988420568741,17.397216470073,0.485710993059139,0,3.780064728066,0,0,0,0,0,1.96703604453562,0,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,2.19100916473955,0,0.143339583151451,0,0,0.436350690340377,2.645134202577,0,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,10.2367705529408,0,0.869046000142011,0,0.0636471582781649,3.23387502333151,0.217716747896961,42.4369293345748,0,0.0717222053926763,4.65724499164419,0.244209805832924,0,0,0.269475606319761,9.38563769613817,0.122241444182866,1.62758471326295,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,1.39560233594486,7.8638893966862,10.8144461073666,0,0.662794751455832,0,0,0,0,0,1.02000345622126,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,1.05950199351452,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,4.5505722260952,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,0,0,0.285955987316295,21.1622426102663,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,2.0694614258501,0,0,0,11.356467132839,25.3926133620033,0,0,0,3.33440328590885,3.32870879020994,24.4936137597041,0,0,0,0,0,0,0,0,0,0,0,0,7.37242642508896,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0,0.460511024178389,0,0,0,0.170453254832202,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,1.46290121726877,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0.329294892959902,0,0.699869440489966,0,0,0,0.753150406214233,1.29151611801369,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,37.4828841038173,24.648068509109,31.3303916141217,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,2.53620294826866,0,0,38.2801391678303,3.57230614267263,63.9641731222362,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,25.6824847135612,0,0,0,0,0,6.04953580243319,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0,0,0,0,0,0,0.999048047910651,0,0,8.75134489096019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,2.21705459206197,0,0,8.19345095995126,10.9613091646951,10.3127422096903,3.34653437150146,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.46872846777995,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,34.4517911171775,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.526472298444801,0,1.56302802246618,0,0,0.147856086217045,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,7.98321331463749,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0.560544326627578,2.73947616152849,0,0,0.428859265059938,0,0,5.9111812582877,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.307988420568741,17.397216470073,0.485710993059139,0,3.780064728066,0,0,0,0,0,1.96703604453562,0,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,2.19100916473955,0,0.143339583151451,0,0,0.436350690340377,2.645134202577,0,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,10.2367705529408,0,0.869046000142011,0,0.0636471582781649,3.23387502333151,0.217716747896961,42.4369293345748,0,0.0717222053926763,4.65724499164419,0.244209805832924,0,0,0.269475606319761,9.38563769613817,0.122241444182866,1.62758471326295,0,0,0 | ||
|short_description=p5@BC017277 | |short_description=p5@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p5@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -64bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.26e-24 | 19 |
chorionic membrane mesenchymal stem cell | 1.58e-11 | 3 |
placental epithelial cell | 6.62e-11 | 3 |
central nervous system pericyte | 2.94e-08 | 2 |
amniotic epithelial cell | 5.11e-08 | 2 |
amnion mesenchymal stem cell | 3.56e-07 | 5 |
fibroblast of choroid plexus | 6.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.30e-34 | 14 |
membranous layer | 5.30e-34 | 14 |
extraembryonic structure | 1.08e-25 | 24 |
chorion | 8.28e-24 | 7 |
placenta | 5.00e-14 | 4 |
allantois | 5.00e-14 | 4 |
amnion | 8.95e-13 | 7 |
egg chorion | 1.58e-11 | 3 |
somatic layer of lateral plate mesoderm | 3.98e-11 | 8 |
organ component layer | 3.71e-08 | 66 |
vascular plexus | 6.85e-07 | 2 |
ventricle of nervous system | 6.85e-07 | 2 |
choroid plexus | 6.85e-07 | 2 |
brain ventricle | 6.85e-07 | 2 |
ventricular system of brain | 6.85e-07 | 2 |
ventricular system of central nervous system | 6.85e-07 | 2 |