FFCP PHASE1:Hg19::chr11:35188261..35188281,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35188261..35188281,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:35188261..35188281,- | |description=CAGE_peak_at_chr11:35188261..35188281,- | ||
|id=chr11:35188261..35188281,- | |id=chr11:35188261..35188281,- | ||
|ontology_enrichment_celltype=CL:0002057!2.28e-25!42;CL:0000860!4.62e-23!45;CL:0000738!2.20e-19!140;CL:0000766!7.41e-18!76;CL:0000557!6.16e-17!71;CL:0002087!2.65e-16!119;CL:0000839!4.09e-16!70;CL:0002031!5.63e-16!124;CL:0002009!2.66e-15!65;CL:0002194!7.43e-15!63;CL:0000576!7.43e-15!63;CL:0000040!7.43e-15!63;CL:0000559!7.43e-15!63;CL:0000037!5.39e-13!172;CL:0000566!5.39e-13!172;CL:0000988!3.78e-12!182;CL:0002032!5.20e-11!165;CL:0000837!5.20e-11!165;CL:0002320!2.81e-10!365;CL:0000134!7.35e-10!358;CL:0000763!1.12e-09!112;CL:0000049!1.12e-09!112;CL:0000219!1.27e-08!390;CL:0000063!2.36e-08!578;CL:0000723!2.38e-08!436;CL:0000034!2.54e-08!444;CL:0000144!3.78e-08!625;CL:0000003!1.60e-07!722;CL:0000048!1.75e-07!430;CL:0002371!2.55e-07!591 | |ontology_enrichment_celltype=CL:0002057!2.28e-25!42;CL:0000860!4.62e-23!45;CL:0000738!2.20e-19!140;CL:0000766!7.41e-18!76;CL:0000557!6.16e-17!71;CL:0002087!2.65e-16!119;CL:0000839!4.09e-16!70;CL:0002031!5.63e-16!124;CL:0002009!2.66e-15!65;CL:0002194!7.43e-15!63;CL:0000576!7.43e-15!63;CL:0000040!7.43e-15!63;CL:0000559!7.43e-15!63;CL:0000037!5.39e-13!172;CL:0000566!5.39e-13!172;CL:0000988!3.78e-12!182;CL:0002032!5.20e-11!165;CL:0000837!5.20e-11!165;CL:0002320!2.81e-10!365;CL:0000134!7.35e-10!358;CL:0000763!1.12e-09!112;CL:0000049!1.12e-09!112;CL:0000219!1.27e-08!390;CL:0000063!2.36e-08!578;CL:0000723!2.38e-08!436;CL:0000034!2.54e-08!444;CL:0000144!3.78e-08!625;CL:0000003!1.60e-07!722;CL:0000048!1.75e-07!430;CL:0002371!2.55e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-44;33!CL:0002057;1.38e-44;33!CL:0000473;6.19e-31;39!CL:0000234;6.19e-31;39!CL:0000576;1.68e-27;48!CL:0000766;4.74e-21;69!CL:0002087;3.36e-15;104!CL:0002393;4.70e-12;6!CL:0002397;4.70e-12;6!CL:0000763;2.31e-11;100!CL:0000226;1.53e-10;3!CL:0000842;1.53e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.22e-54,42;CL:0002057,1.22e-54,42;CL:0000473,2.10e-47,48;CL:0000234,2.10e-47,48;CL:0000766,1.83e-37,72;CL:0002194,2.89e-37,59;CL:0000576,2.89e-37,59;CL:0000040,2.89e-37,59;CL:0000559,2.89e-37,59;CL:0000839,5.81e-37,66;CL:0000557,2.28e-36,67;CL:0002009,5.88e-36,61;CL:0000738,7.36e-25,136;CL:0002087,1.17e-24,115;CL:0000763,6.84e-24,108;CL:0000049,6.84e-24,108;CL:0002031,3.98e-21,120;CL:0000037,2.16e-19,168;CL:0000988,3.31e-18,177;CL:0002032,1.34e-16,161;CL:0000837,1.34e-16,161;CL:0000226,1.32e-10,3;CL:0000842,1.32e-10,3;CL:0002393,3.40e-08,9;CL:0002397,3.40e-08,9;CL:0000134,5.96e-08,354;CL:0002320,1.03e-07,361;CL:0000034,4.26e-07,441;CL:0000219,7.15e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.93e-39;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.56e-16!80;UBERON:0001474!3.05e-14!86;UBERON:0002390!3.11e-14!102;UBERON:0003061!3.11e-14!102;UBERON:0004765!3.24e-13!101;UBERON:0001434!3.24e-13!101;UBERON:0002193!5.41e-12!112;UBERON:0002384!6.16e-10!375;UBERON:0002405!1.19e-09!115;UBERON:0003081!4.06e-08!216;UBERON:0002204!8.23e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!4.56e-16!80;UBERON:0001474!3.05e-14!86;UBERON:0002390!3.11e-14!102;UBERON:0003061!3.11e-14!102;UBERON:0004765!3.24e-13!101;UBERON:0001434!3.24e-13!101;UBERON:0002193!5.41e-12!112;UBERON:0002384!6.16e-10!375;UBERON:0002405!1.19e-09!115;UBERON:0003081!4.06e-08!216;UBERON:0002204!8.23e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-31,76;UBERON:0002390,1.43e-29,98;UBERON:0003061,1.43e-29,98;UBERON:0001474,3.63e-29,82;UBERON:0002193,1.63e-26,108;UBERON:0004765,2.70e-26,90;UBERON:0002405,2.42e-25,93;UBERON:0001434,2.42e-23,100;UBERON:0002204,1.30e-12,167;UBERON:0003081,2.24e-12,203;UBERON:0000926,1.74e-07,315;UBERON:0004120,1.74e-07,315;UBERON:0006603,1.74e-07,315;UBERON:0002384,2.18e-07,371 | |||
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| ||
|short_description=p@chr11:35188261..35188281,- | |short_description=p@chr11:35188261..35188281,- | ||
}} | }} |
Latest revision as of 21:51, 23 July 2015
Short description: | p@chr11:35188261..35188281, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35188261..35188281, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.22e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-54 | 42 |
defensive cell | 2.10e-47 | 48 |
phagocyte | 2.10e-47 | 48 |
myeloid leukocyte | 1.83e-37 | 72 |
monopoietic cell | 2.89e-37 | 59 |
monocyte | 2.89e-37 | 59 |
monoblast | 2.89e-37 | 59 |
promonocyte | 2.89e-37 | 59 |
myeloid lineage restricted progenitor cell | 5.81e-37 | 66 |
granulocyte monocyte progenitor cell | 2.28e-36 | 67 |
macrophage dendritic cell progenitor | 5.88e-36 | 61 |
leukocyte | 7.36e-25 | 136 |
nongranular leukocyte | 1.17e-24 | 115 |
myeloid cell | 6.84e-24 | 108 |
common myeloid progenitor | 6.84e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 3.98e-21 | 120 |
hematopoietic stem cell | 2.16e-19 | 168 |
hematopoietic cell | 3.31e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.34e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-16 | 161 |
single nucleate cell | 1.32e-10 | 3 |
mononuclear cell | 1.32e-10 | 3 |
intermediate monocyte | 3.40e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.40e-08 | 9 |
mesenchymal cell | 5.96e-08 | 354 |
connective tissue cell | 1.03e-07 | 361 |
stem cell | 4.26e-07 | 441 |
motile cell | 7.15e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.04e-31 | 76 |
hematopoietic system | 1.43e-29 | 98 |
blood island | 1.43e-29 | 98 |
bone element | 3.63e-29 | 82 |
hemolymphoid system | 1.63e-26 | 108 |
skeletal element | 2.70e-26 | 90 |
immune system | 2.42e-25 | 93 |
skeletal system | 2.42e-23 | 100 |
musculoskeletal system | 1.30e-12 | 167 |
lateral plate mesoderm | 2.24e-12 | 203 |
mesoderm | 1.74e-07 | 315 |
mesoderm-derived structure | 1.74e-07 | 315 |
presumptive mesoderm | 1.74e-07 | 315 |
connective tissue | 2.18e-07 | 371 |