FFCP PHASE1:Hg19::chr11:47378273..47378303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:47378273..47378303,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:47378273..47378303,+ | |description=CAGE_peak_at_chr11:47378273..47378303,+ | ||
|id=chr11:47378273..47378303,+ | |id=chr11:47378273..47378303,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.47e-48!42;CL:0000860!1.24e-43!45;CL:0000763!1.04e-38!112;CL:0000049!1.04e-38!112;CL:0002194!1.20e-33!63;CL:0000576!1.20e-33!63;CL:0000040!1.20e-33!63;CL:0000559!1.20e-33!63;CL:0000766!1.39e-33!76;CL:0002009!3.50e-32!65;CL:0000839!6.05e-32!70;CL:0000557!2.73e-31!71;CL:0000037!4.85e-31!172;CL:0000566!4.85e-31!172;CL:0002032!1.34e-29!165;CL:0000837!1.34e-29!165;CL:0000988!5.38e-29!182;CL:0000738!8.02e-25!140;CL:0002087!7.98e-24!119;CL:0002031!8.89e-20!124;CL:0002393!6.66e-08!9;CL:0002397!6.66e-08!9 | |ontology_enrichment_celltype=CL:0002057!9.47e-48!42;CL:0000860!1.24e-43!45;CL:0000763!1.04e-38!112;CL:0000049!1.04e-38!112;CL:0002194!1.20e-33!63;CL:0000576!1.20e-33!63;CL:0000040!1.20e-33!63;CL:0000559!1.20e-33!63;CL:0000766!1.39e-33!76;CL:0002009!3.50e-32!65;CL:0000839!6.05e-32!70;CL:0000557!2.73e-31!71;CL:0000037!4.85e-31!172;CL:0000566!4.85e-31!172;CL:0002032!1.34e-29!165;CL:0000837!1.34e-29!165;CL:0000988!5.38e-29!182;CL:0000738!8.02e-25!140;CL:0002087!7.98e-24!119;CL:0002031!8.89e-20!124;CL:0002393!6.66e-08!9;CL:0002397!6.66e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-70;33!CL:0002057;2.42e-70;33!CL:0000473;5.06e-56;39!CL:0000234;5.06e-56;39!CL:0000576;2.08e-43;48!CL:0000766;2.30e-26;69!CL:0000763;2.25e-19;100!CL:0002087;6.60e-11;104!CL:0000738;1.48e-09;136!CL:0002393;1.93e-08;6!CL:0002397;1.93e-08;6!CL:0000775;7.78e-08;3!CL:0000226;1.33e-07;3!CL:0000842;1.33e-07;3!CL:0000988;9.71e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.37e-77,42;CL:0002057,8.37e-77,42;CL:0000473,6.03e-72,48;CL:0000234,6.03e-72,48;CL:0002194,2.25e-56,59;CL:0000576,2.25e-56,59;CL:0000040,2.25e-56,59;CL:0000559,2.25e-56,59;CL:0002009,2.30e-54,61;CL:0000766,6.61e-53,72;CL:0000839,7.29e-50,66;CL:0000557,4.82e-49,67;CL:0000763,4.06e-44,108;CL:0000049,4.06e-44,108;CL:0002087,6.29e-31,115;CL:0000037,5.31e-30,168;CL:0000738,1.70e-29,136;CL:0000988,3.93e-28,177;CL:0002032,1.79e-27,161;CL:0000837,1.79e-27,161;CL:0002031,6.01e-25,120;CL:0000134,1.43e-10,354;CL:0002320,3.16e-10,361;CL:0000219,5.11e-09,386;CL:0000775,7.04e-08,3;CL:0000226,9.23e-08,3;CL:0000842,9.23e-08,3;CL:0000048,1.54e-07,427;CL:0000723,2.46e-07,433;CL:0000034,4.52e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.57e-57;42!CL:0000049;2.43e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!2.21e-07!31 | |ontology_enrichment_disease=DOID:8692!2.21e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-31!102;UBERON:0003061!1.70e-31!102;UBERON:0002193!1.19e-29!112;UBERON:0002371!3.72e-26!80;UBERON:0001474!2.40e-23!86;UBERON:0004765!5.83e-20!101;UBERON:0001434!5.83e-20!101;UBERON:0007023!1.61e-18!115;UBERON:0002405!1.15e-16!115;UBERON:0001049!9.54e-14!57;UBERON:0005068!9.54e-14!57;UBERON:0006241!9.54e-14!57;UBERON:0007135!9.54e-14!57;UBERON:0002780!3.32e-12!41;UBERON:0001890!3.32e-12!41;UBERON:0006240!3.32e-12!41;UBERON:0002616!6.53e-12!59;UBERON:0003080!9.08e-12!42;UBERON:0001893!4.38e-10!34;UBERON:0002791!2.07e-09!33;UBERON:0002020!4.09e-09!34;UBERON:0003528!4.09e-09!34;UBERON:0003081!4.73e-09!216;UBERON:0000955!7.31e-09!69;UBERON:0006238!7.31e-09!69;UBERON:0001869!1.25e-08!32;UBERON:0000178!1.27e-08!15;UBERON:0000179!1.27e-08!15;UBERON:0000463!1.27e-08!15;UBERON:0003075!1.81e-08!86;UBERON:0007284!1.81e-08!86;UBERON:0002204!3.50e-08!167;UBERON:0002346!9.69e-08!90;UBERON:0001017!1.18e-07!82;UBERON:0005743!1.41e-07!86;UBERON:0003056!5.33e-07!61;UBERON:0002619!7.52e-07!22 | |ontology_enrichment_uberon=UBERON:0002390!1.70e-31!102;UBERON:0003061!1.70e-31!102;UBERON:0002193!1.19e-29!112;UBERON:0002371!3.72e-26!80;UBERON:0001474!2.40e-23!86;UBERON:0004765!5.83e-20!101;UBERON:0001434!5.83e-20!101;UBERON:0007023!1.61e-18!115;UBERON:0002405!1.15e-16!115;UBERON:0001049!9.54e-14!57;UBERON:0005068!9.54e-14!57;UBERON:0006241!9.54e-14!57;UBERON:0007135!9.54e-14!57;UBERON:0002780!3.32e-12!41;UBERON:0001890!3.32e-12!41;UBERON:0006240!3.32e-12!41;UBERON:0002616!6.53e-12!59;UBERON:0003080!9.08e-12!42;UBERON:0001893!4.38e-10!34;UBERON:0002791!2.07e-09!33;UBERON:0002020!4.09e-09!34;UBERON:0003528!4.09e-09!34;UBERON:0003081!4.73e-09!216;UBERON:0000955!7.31e-09!69;UBERON:0006238!7.31e-09!69;UBERON:0001869!1.25e-08!32;UBERON:0000178!1.27e-08!15;UBERON:0000179!1.27e-08!15;UBERON:0000463!1.27e-08!15;UBERON:0003075!1.81e-08!86;UBERON:0007284!1.81e-08!86;UBERON:0002204!3.50e-08!167;UBERON:0002346!9.69e-08!90;UBERON:0001017!1.18e-07!82;UBERON:0005743!1.41e-07!86;UBERON:0003056!5.33e-07!61;UBERON:0002619!7.52e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.41e-08;15!UBERON:0000179;4.41e-08;15!UBERON:0000463;4.41e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.03e-46,98;UBERON:0003061,3.03e-46,98;UBERON:0002371,1.29e-42,76;UBERON:0002193,2.14e-41,108;UBERON:0001474,4.19e-39,82;UBERON:0004765,3.84e-35,90;UBERON:0002405,7.88e-34,93;UBERON:0001434,4.52e-31,100;UBERON:0003081,5.29e-19,203;UBERON:0002204,2.67e-16,167;UBERON:0000926,7.06e-10,315;UBERON:0004120,7.06e-10,315;UBERON:0006603,7.06e-10,315;UBERON:0002384,9.28e-10,371;UBERON:0000178,3.78e-08,15;UBERON:0000179,3.78e-08,15;UBERON:0000463,3.78e-08,15 | |||
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|short_description=p@chr11:47378273..47378303,+ | |short_description=p@chr11:47378273..47378303,+ | ||
}} | }} |
Latest revision as of 22:35, 23 July 2015
Short description: | p@chr11:47378273..47378303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47378273..47378303, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.37e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-77 | 42 |
defensive cell | 6.03e-72 | 48 |
phagocyte | 6.03e-72 | 48 |
monopoietic cell | 2.25e-56 | 59 |
monocyte | 2.25e-56 | 59 |
monoblast | 2.25e-56 | 59 |
promonocyte | 2.25e-56 | 59 |
macrophage dendritic cell progenitor | 2.30e-54 | 61 |
myeloid leukocyte | 6.61e-53 | 72 |
myeloid lineage restricted progenitor cell | 7.29e-50 | 66 |
granulocyte monocyte progenitor cell | 4.82e-49 | 67 |
myeloid cell | 4.06e-44 | 108 |
common myeloid progenitor | 4.06e-44 | 108 |
nongranular leukocyte | 6.29e-31 | 115 |
hematopoietic stem cell | 5.31e-30 | 168 |
leukocyte | 1.70e-29 | 136 |
hematopoietic cell | 3.93e-28 | 177 |
hematopoietic oligopotent progenitor cell | 1.79e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 6.01e-25 | 120 |
mesenchymal cell | 1.43e-10 | 354 |
connective tissue cell | 3.16e-10 | 361 |
motile cell | 5.11e-09 | 386 |
neutrophil | 7.04e-08 | 3 |
single nucleate cell | 9.23e-08 | 3 |
mononuclear cell | 9.23e-08 | 3 |
multi fate stem cell | 1.54e-07 | 427 |
somatic stem cell | 2.46e-07 | 433 |
stem cell | 4.52e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.03e-46 | 98 |
blood island | 3.03e-46 | 98 |
bone marrow | 1.29e-42 | 76 |
hemolymphoid system | 2.14e-41 | 108 |
bone element | 4.19e-39 | 82 |
skeletal element | 3.84e-35 | 90 |
immune system | 7.88e-34 | 93 |
skeletal system | 4.52e-31 | 100 |
lateral plate mesoderm | 5.29e-19 | 203 |
musculoskeletal system | 2.67e-16 | 167 |
mesoderm | 7.06e-10 | 315 |
mesoderm-derived structure | 7.06e-10 | 315 |
presumptive mesoderm | 7.06e-10 | 315 |
connective tissue | 9.28e-10 | 371 |
blood | 3.78e-08 | 15 |
haemolymphatic fluid | 3.78e-08 | 15 |
organism substance | 3.78e-08 | 15 |