FFCP PHASE1:Hg19::chr11:62321037..62321046,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62321037..62321046,- | |||
|coexpression_cluster_id=C2049 | |coexpression_cluster_id=C2049 | ||
|description=CAGE_peak_at_chr11:62321037..62321046,- | |description=CAGE_peak_at_chr11:62321037..62321046,- | ||
|id=chr11:62321037..62321046,- | |id=chr11:62321037..62321046,- | ||
|ontology_enrichment_celltype=CL:0000860!5.80e-47!45;CL:0002057!2.60e-45!42;CL:0000766!2.66e-37!76;CL:0000557!1.17e-35!71;CL:0000839!3.07e-34!70;CL:0000738!5.25e-34!140;CL:0002009!1.09e-30!65;CL:0002194!6.18e-30!63;CL:0000576!6.18e-30!63;CL:0000040!6.18e-30!63;CL:0000559!6.18e-30!63;CL:0002031!5.39e-27!124;CL:0000763!1.02e-25!112;CL:0000049!1.02e-25!112;CL:0002087!1.66e-25!119;CL:0000037!8.10e-25!172;CL:0000566!8.10e-25!172;CL:0002032!8.47e-23!165;CL:0000837!8.47e-23!165;CL:0000988!1.27e-22!182;CL:0002393!4.15e-16!9;CL:0002397!4.15e-16!9;CL:0000134!5.62e-14!358;CL:0002320!2.30e-13!365;CL:0000219!4.95e-13!390;CL:0000034!1.36e-10!444;CL:0000723!1.61e-10!436;CL:0000048!2.31e-10!430;CL:0000767!2.25e-08!3;CL:0002274!7.20e-08!5;CL:0000457!7.20e-08!5;CL:0002191!7.20e-08!5;CL:0000097!7.20e-08!5;CL:0000831!7.20e-08!5;CL:0002028!7.20e-08!5;CL:0000875!1.02e-07!3;CL:0002396!1.02e-07!3;CL:0000063!2.09e-07!578;CL:0000842!2.93e-07!3;CL:0000623!7.29e-07!3;CL:0000825!7.29e-07!3 | |ontology_enrichment_celltype=CL:0000860!5.80e-47!45;CL:0002057!2.60e-45!42;CL:0000766!2.66e-37!76;CL:0000557!1.17e-35!71;CL:0000839!3.07e-34!70;CL:0000738!5.25e-34!140;CL:0002009!1.09e-30!65;CL:0002194!6.18e-30!63;CL:0000576!6.18e-30!63;CL:0000040!6.18e-30!63;CL:0000559!6.18e-30!63;CL:0002031!5.39e-27!124;CL:0000763!1.02e-25!112;CL:0000049!1.02e-25!112;CL:0002087!1.66e-25!119;CL:0000037!8.10e-25!172;CL:0000566!8.10e-25!172;CL:0002032!8.47e-23!165;CL:0000837!8.47e-23!165;CL:0000988!1.27e-22!182;CL:0002393!4.15e-16!9;CL:0002397!4.15e-16!9;CL:0000134!5.62e-14!358;CL:0002320!2.30e-13!365;CL:0000219!4.95e-13!390;CL:0000034!1.36e-10!444;CL:0000723!1.61e-10!436;CL:0000048!2.31e-10!430;CL:0000767!2.25e-08!3;CL:0002274!7.20e-08!5;CL:0000457!7.20e-08!5;CL:0002191!7.20e-08!5;CL:0000097!7.20e-08!5;CL:0000831!7.20e-08!5;CL:0002028!7.20e-08!5;CL:0000875!1.02e-07!3;CL:0002396!1.02e-07!3;CL:0000063!2.09e-07!578;CL:0000842!2.93e-07!3;CL:0000623!7.29e-07!3;CL:0000825!7.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000767;4.11e-54;3!CL:0000097;4.30e-33;5!CL:0002393;1.02e-27;6!CL:0002397;1.02e-27;6!CL:0000094;8.02e-21;8!CL:0000163;9.78e-19;9!CL:0000766;2.84e-17;69!CL:0000081;2.43e-15;11!CL:0000576;9.54e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,3.13e-54,3;CL:0000097,2.78e-33,5;CL:0002028,2.78e-33,5;CL:0000766,3.58e-29,72;CL:0000094,7.25e-21,8;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000163,7.68e-19,9;CL:0002393,1.17e-18,9;CL:0002397,1.17e-18,9;CL:0000839,8.56e-17,66;CL:0000557,1.53e-16,67;CL:0000081,2.25e-15,11;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000860,8.36e-11,42;CL:0002057,8.36e-11,42;CL:0000473,1.84e-09,48;CL:0000234,1.84e-09,48;CL:0002031,4.38e-09,120;CL:0002194,1.42e-07,59;CL:0000576,1.42e-07,59;CL:0000040,1.42e-07,59;CL:0000559,1.42e-07,59;CL:0002009,2.49e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.14e-30!80;UBERON:0001474!1.67e-27!86;UBERON:0002390!6.67e-26!102;UBERON:0003061!6.67e-26!102;UBERON:0004765!1.23e-24!101;UBERON:0001434!1.23e-24!101;UBERON:0002193!1.54e-22!112;UBERON:0002405!7.88e-18!115;UBERON:0002384!1.56e-12!375;UBERON:0002204!4.87e-12!167;UBERON:0003081!4.32e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!2.14e-30!80;UBERON:0001474!1.67e-27!86;UBERON:0002390!6.67e-26!102;UBERON:0003061!6.67e-26!102;UBERON:0004765!1.23e-24!101;UBERON:0001434!1.23e-24!101;UBERON:0002193!1.54e-22!112;UBERON:0002405!7.88e-18!115;UBERON:0002384!1.56e-12!375;UBERON:0002204!4.87e-12!167;UBERON:0003081!4.32e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-14,76;UBERON:0001474,1.79e-13,82;UBERON:0004765,3.00e-12,90;UBERON:0002405,7.65e-12,93;UBERON:0002390,3.21e-11,98;UBERON:0003061,3.21e-11,98;UBERON:0001434,5.48e-11,100;UBERON:0002193,3.82e-10,108 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.32224184974114,0,0,0.369754010166788,0,0,0,2.76997704265939,1.00272223735071,2.17010870715852,0,0,0,0,0.377875943688809,0.970336244751265,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0.236482229888585,1.03423704220986,0,0,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,2.17188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0.422510572623884,0,0.419317291016752,0.336985893439485,0.750884464207532,0.64290234678832,0.570025487482497,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.24396869324463,2.88239906833923,2.39860623510122,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.32224184974114,0,0,0.369754010166788,0,0,0,2.76997704265939,1.00272223735071,2.17010870715852,0,0,0,0,0.377875943688809,0.970336244751265,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0.236482229888585,1.03423704220986,0,0,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,2.17188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0.422510572623884,0,0.419317291016752,0.336985893439485,0.750884464207532,0.64290234678832,0.570025487482497,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.24396869324463,2.88239906833923,2.39860623510122,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:62321037..62321046,- | |short_description=p@chr11:62321037..62321046,- | ||
}} | }} |
Latest revision as of 23:41, 23 July 2015
Short description: | p@chr11:62321037..62321046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62321037..62321046, - |
Coexpression cluster: | C2049_CD14_Mast_Basophils_Eosinophils_Neutrophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 3.13e-54 | 3 |
mast cell | 2.78e-33 | 5 |
basophil mast progenitor cell | 2.78e-33 | 5 |
myeloid leukocyte | 3.58e-29 | 72 |
granulocyte | 7.25e-21 | 8 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
endocrine cell | 7.68e-19 | 9 |
intermediate monocyte | 1.17e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.17e-18 | 9 |
myeloid lineage restricted progenitor cell | 8.56e-17 | 66 |
granulocyte monocyte progenitor cell | 1.53e-16 | 67 |
blood cell | 2.25e-15 | 11 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
classical monocyte | 8.36e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.36e-11 | 42 |
defensive cell | 1.84e-09 | 48 |
phagocyte | 1.84e-09 | 48 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
monopoietic cell | 1.42e-07 | 59 |
monocyte | 1.42e-07 | 59 |
monoblast | 1.42e-07 | 59 |
promonocyte | 1.42e-07 | 59 |
macrophage dendritic cell progenitor | 2.49e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-14 | 76 |
bone element | 1.79e-13 | 82 |
skeletal element | 3.00e-12 | 90 |
immune system | 7.65e-12 | 93 |
hematopoietic system | 3.21e-11 | 98 |
blood island | 3.21e-11 | 98 |
skeletal system | 5.48e-11 | 100 |
hemolymphoid system | 3.82e-10 | 108 |