FFCP PHASE1:Hg19::chr11:86519501..86519515,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:86519501..86519515,+ to FFCP PHASE1:Hg19::chr11:86519501..86519515,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:86519501..86519515,+ | |||
|coexpression_cluster_id=C1006 | |||
|description=CAGE_peak_at_chr11:86519501..86519515,+ | |||
|id=chr11:86519501..86519515,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.11e-15!119;CL:0000213!1.63e-14!57;CL:0000215!1.63e-14!57;CL:0000055!5.49e-14!180;CL:0000220!3.38e-13!246;CL:0002321!1.05e-12!248;CL:0000057!4.29e-12!75;CL:0000066!3.05e-11!254;CL:0000548!2.21e-10!679;CL:0000004!2.21e-10!679;CL:0000255!2.21e-10!679;CL:0000012!7.35e-10!682;CL:0002139!3.18e-09!24;CL:0002078!6.66e-09!44;CL:0000115!1.88e-08!35;CL:0000076!1.93e-07!62;CL:0000144!2.49e-07!625;CL:0000499!3.19e-07!27;CL:0000071!5.55e-07!18;CL:0002546!5.55e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.57e-09;24!CL:0000115;1.48e-08;36!CL:0000213;1.52e-08;58!CL:0000215;1.52e-08;58!CL:0002078;5.95e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.89e-16,58;CL:0000215,2.89e-16,58;CL:0000222,2.95e-13,121;CL:0000115,6.09e-11,36;CL:0002078,8.96e-11,45;CL:0002139,1.75e-09,24;CL:0000057,1.20e-07,76;CL:0002321,1.96e-07,250;CL:0000066,2.76e-07,253;CL:0000071,7.45e-07,18;CL:0002546,7.45e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.44e-11!79;UBERON:0007798!3.44e-11!79;UBERON:0000055!8.81e-10!69;UBERON:0004872!1.18e-09!84;UBERON:0001981!3.84e-09!60;UBERON:0007500!3.84e-09!60;UBERON:0004537!3.84e-09!60;UBERON:0006965!3.84e-09!60;UBERON:0004535!4.29e-08!110;UBERON:0003914!8.42e-08!118;UBERON:0001009!1.20e-07!113;UBERON:0001637!2.57e-07!42;UBERON:0003509!2.57e-07!42;UBERON:0004572!2.57e-07!42;UBERON:0006914!4.58e-07!25;UBERON:0000947!4.97e-07!21;UBERON:0010191!4.97e-07!21;UBERON:0001986!5.55e-07!18;UBERON:0004638!5.55e-07!18;UBERON:0004852!5.55e-07!18;UBERON:0002100!9.25e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.33e-08;9!UBERON:0000042;1.33e-08;9!UBERON:0003688;1.01e-07;6!UBERON:0002358;1.01e-07;6!UBERON:0003684;1.01e-07;6!UBERON:0001178;1.01e-07;6!UBERON:0006914;8.18e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.21e-11,78;UBERON:0007798,1.21e-11,78;UBERON:0000055,3.41e-10,68;UBERON:0007500,7.43e-09,59;UBERON:0001981,7.43e-09,59;UBERON:0004537,7.43e-09,59;UBERON:0006965,7.43e-09,59;UBERON:0004535,2.26e-08,109;UBERON:0004872,2.47e-08,83;UBERON:0001009,7.30e-08,112;UBERON:0003688,8.61e-08,6;UBERON:0002358,8.61e-08,6;UBERON:0003684,8.61e-08,6;UBERON:0001178,8.61e-08,6;UBERON:0006914,2.95e-07,25;UBERON:0004638,7.45e-07,18;UBERON:0001986,7.45e-07,18;UBERON:0004852,7.45e-07,18;UBERON:0001637,9.67e-07,42;UBERON:0003509,9.67e-07,42;UBERON:0004572,9.67e-07,42 | |||
|phase1_expression=1.45342703416445,8.13581990785736,1.12763523276777,7.00513088471913,1.78784437770915,26.1701557230111,2.53299878168311,0.631719873426831,0,0,2.09340350391728,1.52908960491121,1.31883489114227,0.37129905888014,1.32558950291166,1.34465029290355,2.41077811209591,2.19093027116212,1.46379839637152,0.369363174230364,1.22400414746552,0.626909442956176,0,1.36874425072884,0.87879847716362,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0.670700859703636,0.255725123687061,2.1686349143074,1.50401373190767,5.35932120155048,0.795285947051099,2.43317435151318,1.22895262313288,6.43015252641436,2.98638271356629,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,1.69592382577203,2.93649605346934,6.05259692268148,2.50793959844173,1.29208379584664,1.42306505074684,1.33888245105868,3.62546385398232,3.04108842287405,2.68468263302986,0.367663080345869,8.91156142669936,0.982297011124877,0,0.112611480483322,1.53316637465883,1.89853131913626,1.64881569537367,0,0,0.436094052142534,2.98183171017191,0.886413581652058,0.529636723252875,4.30254931123221,2.12801029319014,1.68203280042692,0,3.7000132262574,0.622422070799533,1.61652806483626,1.47115712802113,0.151357427644931,0.576175924479999,0.234321431833797,0,0.570471821544449,0.298897361103602,0.23486899728753,0.485618833104395,0.561803226808994,0.408308342509787,0.859840221182376,0.516628905878827,0,1.23633464639278,0,0,0.336672227908132,1.62654075833553,0.277064115484183,1.31693286264251,5.51678032438235,0.751190294532984,1.02088964844019,1.79389635688862,2.34913127700424,0.423863802319124,1.20036438433761,0.206105058476878,1.8034837803194,1.11670113798954,0.168776332241266,0.779496041289589,0.252433774244115,1.28869858099219,0.80823028409406,2.13005755509969,0.302256294682921,0.67824236924195,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0.310983165046111,0.252320850875628,0,0,10.935095949279,0,4.17931135228781,4.33127689001751,2.24782920075703,0.842923450390509,1.44606617930089,2.20587945464788,1.74303555273925,0.949082476444386,1.21348177344148,2.35465758150415,0.769494313892781,2.21446636387394,1.40241773803446,1.2347220339942,0,0,0,0.590789906681404,0,0.122988438543114,1.20097467208968,0.658501712451753,0,0,0.277765335475589,0,0,0,0.34779121492523,0,1.44366447761074,0.925971025153221,1.52203321787679,0,0.858486162094873,0,0,0,0,2.01578553838631,0.141775097242386,0.447792613514241,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0.112131084345361,0.43596006883328,0.80672114403045,0.258543431515556,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0.904318131178758,0,1.99945982364114,0,0,0,1.4377491329495,0,0,2.17171960001369,2.26023954805422,0.537182889719687,0,0,1.2937654491571,0.256686072559497,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,1.08506009479894,3.11956292296211,18.9134728124991,3.78485796081443,1.63997980989798,0.300946099727719,9.09630016223939,0,0,0.553107505625109,0.521301686808497,1.37060810223918,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,1.5119514666484,2.97729369382532,1.2276957863045,7.85848264412606,3.33161788064823,2.55853624533352,4.98647155545183,10.3892646511494,0.308419387605311,0.355123450626254,0.0821271560138091,1.55776328755086,0.232420756919918,0.725156697549733,6.41620704970512,0.736647911487171,0.918515585316854,1.63882051206045,0.524497659837696,0,0.385076685522074,0,0,0.422206515571503,4.54933536283586,2.38131187387122,0.863663664408557,1.54227252690289,0,0,0,0,0.447749509444357,0,0,0,0.984043937099117,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0,0.462145851343933,0.614014698904518,0.551346289938122,0,0.580066775656914,0.255679882248303,0,0.330569830721956,0.576570202095319,0,0.10115778085555,0.464845549297286,1.25924938732256,0,2.15623506123262,0.532306030317022,0.869932992075073,1.29726953372744,1.5743737541619,0.744316738719335,0,1.90630193923825,0.767693373934002,0,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0,1.95053495635836,5.11798328225697,0,0.818999468447914,1.41405431953713,0,0,3.3171948762061,8.33056681982149,0.578775534266688,0,0,1.239293992399,0.845086807596724,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,2.74439925886963,3.29294892959902,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,4.05865624054073,0.89089404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| ||
|short_description=p@chr11:86519501..86519515,+ | |||
}} | }} |
Latest revision as of 03:19, 24 July 2015
Short description: | p@chr11:86519501..86519515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86519501..86519515, + |
Coexpression cluster: | C1006_Adipocyte_Olfactory_Preadipocyte_tenocyte_Hair_meningioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.89e-16 | 58 |
barrier cell | 2.89e-16 | 58 |
mesodermal cell | 2.95e-13 | 121 |
endothelial cell | 6.09e-11 | 36 |
meso-epithelial cell | 8.96e-11 | 45 |
endothelial cell of vascular tree | 1.75e-09 | 24 |
fibroblast | 1.20e-07 | 76 |
embryonic cell | 1.96e-07 | 250 |
epithelial cell | 2.76e-07 | 253 |
blood vessel endothelial cell | 7.45e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.45e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.21e-11 | 78 |
vascular system | 1.21e-11 | 78 |
vessel | 3.41e-10 | 68 |
epithelial tube open at both ends | 7.43e-09 | 59 |
blood vessel | 7.43e-09 | 59 |
blood vasculature | 7.43e-09 | 59 |
vascular cord | 7.43e-09 | 59 |
cardiovascular system | 2.26e-08 | 109 |
splanchnic layer of lateral plate mesoderm | 2.47e-08 | 83 |
circulatory system | 7.30e-08 | 112 |
omentum | 8.61e-08 | 6 |
peritoneum | 8.61e-08 | 6 |
abdominal cavity | 8.61e-08 | 6 |
visceral peritoneum | 8.61e-08 | 6 |
squamous epithelium | 2.95e-07 | 25 |
blood vessel endothelium | 7.45e-07 | 18 |
endothelium | 7.45e-07 | 18 |
cardiovascular system endothelium | 7.45e-07 | 18 |
artery | 9.67e-07 | 42 |
arterial blood vessel | 9.67e-07 | 42 |
arterial system | 9.67e-07 | 42 |