FFCP PHASE1:Hg19::chr12:107714027..107714057,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:107714027..107714057,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr12:107714027..107714057,- | |||
|id=chr12:107714027..107714057,- | |||
|ontology_enrichment_celltype=CL:0000791!1.08e-13!18;CL:0000789!1.08e-13!18;CL:0002420!1.08e-13!18;CL:0002419!1.08e-13!18;CL:0000790!1.08e-13!18;CL:0000084!3.73e-13!25;CL:0000827!3.73e-13!25;CL:0000625!2.26e-09!11;CL:0002393!9.54e-09!9;CL:0002397!9.54e-09!9;CL:0000624!3.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.98e-38;18!CL:0000789;1.98e-38;18!CL:0002419;1.98e-38;18!CL:0000084;3.25e-34;25!CL:0000625;3.72e-28;11!CL:0000624;2.20e-14;6!CL:0000226;7.86e-11;3!CL:0000842;7.86e-11;3!CL:0000542;2.90e-10;53!CL:0002393;1.78e-08;6!CL:0002397;1.78e-08;6!CL:0000575;3.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.13e-38,18;CL:0000789,2.13e-38,18;CL:0002420,2.13e-38,18;CL:0002419,2.13e-38,18;CL:0000790,2.13e-38,18;CL:0000084,5.32e-34,25;CL:0000827,5.32e-34,25;CL:0000625,6.82e-28,11;CL:0000838,6.06e-18,52;CL:0000542,1.63e-17,53;CL:0000051,1.63e-17,53;CL:0002087,1.07e-14,115;CL:0000624,1.33e-14,6;CL:0000738,1.03e-13,136;CL:0002393,7.75e-12,9;CL:0002397,7.75e-12,9;CL:0000037,1.51e-11,168;CL:0000226,6.49e-11,3;CL:0000842,6.49e-11,3;CL:0000988,1.41e-10,177;CL:0002031,2.77e-10,120;CL:0002032,1.62e-08,161;CL:0000837,1.62e-08,161;CL:0000575,4.38e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.98e-38;18!CL:0000051;2.90e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-09;15!UBERON:0000179;1.30e-09;15!UBERON:0000463;1.30e-09;15!UBERON:0002390;2.34e-07;32!UBERON:0002370;3.60e-07;2!UBERON:0005058;3.60e-07;2!UBERON:0009113;3.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.50e-10,15;UBERON:0000179,6.50e-10,15;UBERON:0000463,6.50e-10,15;UBERON:0003351,8.19e-09,6;UBERON:0002370,4.67e-08,4;UBERON:0005058,4.67e-08,4;UBERON:0009113,4.67e-08,4;UBERON:0003295,4.67e-08,4;UBERON:0005562,4.67e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0.919421224478927,0,0,0,0,0.293600439334847,1.10799081706375,1.40381113229099,1.08505435357926,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0,0.845021145247767,0.425208599930087,1.25795187305026,0.561643155732475,0.300353785683013,0.32145117339416,1.99508920618874,1.59133341759272,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0,5.28685314316103,1.68152568894461,0.526768169550154,1.7703879310245,5.50215067848831,2.46721798799411,1.5046784585161,26.3997035973208,16.5706732007157,11.6896037044747,0,0.589211814949674,0.443067789167242,0,0,0,1.64437904603676,4.14525026678773,5.21645554323094,19.722112900554,12.5744189202165,26.1338809512442,0.793165398882963,6.89796888483458,3.77990190030893,5.31341353240956,1.27426165729639,3.25541726928209,4.75226022224187,1.05402583354441,2.17577238962511,0,1.4206635122641,2.46338399076314,2.62088766192152,1.33720097891754,3.18613688542158,0,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0.221729397462564,0.175669571386252,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94633578946371,0,0.686271241194102,0.109750285408626,0,0.100528972411631,0,0,0,0,0.811512834825538,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.567100388969546,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,2.18183161675572,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.44737618286021,5.39285502046542,4.58928498554811,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0.55597265731176,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0.731140468893853,0,0,0,1.13008116620243,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,0.714695326373367,1.64544909234478,0.648473311192717,1.62009431171434,0,0.213648142254946,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,1.31843099381408,0,0,0.276283915531148,0,0,0,0,0,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0.274083849293502,0.19871461170299,0.189932387867636,0,0.240476460754601,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,1.02652102730598,0,0.106787412567695,0,0,0.496166021811951,0,0,1.91502377331055,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.248385611765534,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0.255788742607303,0,0,1.31051565830417,0,0,0,0,0,0.157723490002507,0,0,0,0,1.41696576325585,0.638535436228605,0,0,0.276629009856872,0,0,0.0981477185010256,0.353909170043221,0.550285795565037,0.231051332300676,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0.295712172434091,0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| |||
|short_description=p@chr12:107714027..107714057,- | |||
}} |
Latest revision as of 04:32, 24 July 2015
Short description: | p@chr12:107714027..107714057, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:107714027..107714057, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.13e-38 | 18 |
alpha-beta T cell | 2.13e-38 | 18 |
immature T cell | 2.13e-38 | 18 |
mature T cell | 2.13e-38 | 18 |
immature alpha-beta T cell | 2.13e-38 | 18 |
T cell | 5.32e-34 | 25 |
pro-T cell | 5.32e-34 | 25 |
CD8-positive, alpha-beta T cell | 6.82e-28 | 11 |
lymphoid lineage restricted progenitor cell | 6.06e-18 | 52 |
lymphocyte | 1.63e-17 | 53 |
common lymphoid progenitor | 1.63e-17 | 53 |
nongranular leukocyte | 1.07e-14 | 115 |
CD4-positive, alpha-beta T cell | 1.33e-14 | 6 |
leukocyte | 1.03e-13 | 136 |
intermediate monocyte | 7.75e-12 | 9 |
CD14-positive, CD16-positive monocyte | 7.75e-12 | 9 |
hematopoietic stem cell | 1.51e-11 | 168 |
single nucleate cell | 6.49e-11 | 3 |
mononuclear cell | 6.49e-11 | 3 |
hematopoietic cell | 1.41e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.77e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.62e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-08 | 161 |
corneal epithelial cell | 4.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.50e-10 | 15 |
haemolymphatic fluid | 6.50e-10 | 15 |
organism substance | 6.50e-10 | 15 |
pharyngeal epithelium | 8.19e-09 | 6 |
thymus | 4.67e-08 | 4 |
hemolymphoid system gland | 4.67e-08 | 4 |
thymic region | 4.67e-08 | 4 |
pharyngeal gland | 4.67e-08 | 4 |
thymus primordium | 4.67e-08 | 4 |