FFCP PHASE1:Hg19::chr12:113828372..113828491,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:113828372..113828491,+ | |||
|coexpression_cluster_id=C660 | |||
|description=CAGE_peak_at_chr12:113828372..113828491,+ | |||
|id=chr12:113828372..113828491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.73e-12!57;UBERON:0005068!2.73e-12!57;UBERON:0006241!2.73e-12!57;UBERON:0007135!2.73e-12!57;UBERON:0000062!3.56e-10!511;UBERON:0002616!5.84e-10!59;UBERON:0003080!8.02e-10!42;UBERON:0002780!8.99e-10!41;UBERON:0001890!8.99e-10!41;UBERON:0006240!8.99e-10!41;UBERON:0003075!2.75e-09!86;UBERON:0007284!2.75e-09!86;UBERON:0000955!5.65e-09!69;UBERON:0006238!5.65e-09!69;UBERON:0001017!9.44e-09!82;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0002346!2.26e-08!90;UBERON:0005743!2.84e-08!86;UBERON:0000468!4.43e-08!659;UBERON:0002791!1.90e-07!33;UBERON:0001869!2.25e-07!32;UBERON:0001893!2.50e-07!34;UBERON:0003056!4.48e-07!61;UBERON:0000073!7.76e-07!94;UBERON:0001016!7.76e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.94e-07;41!UBERON:0001890;1.94e-07;41!UBERON:0003528;1.95e-07;34!UBERON:0002020;1.95e-07;34!UBERON:0000073;3.53e-07;53!UBERON:0002616;3.53e-07;53!UBERON:0002791;5.53e-07;32!UBERON:0001869;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.77e-12,56;UBERON:0005068,2.77e-12,56;UBERON:0006241,2.77e-12,56;UBERON:0007135,2.77e-12,56;UBERON:0000073,3.05e-11,53;UBERON:0002616,3.05e-11,53;UBERON:0002780,8.22e-10,41;UBERON:0001890,8.22e-10,41;UBERON:0003080,8.22e-10,41;UBERON:0006240,8.22e-10,41;UBERON:0003075,1.57e-09,82;UBERON:0007284,1.57e-09,82;UBERON:0000955,6.77e-09,68;UBERON:0006238,6.77e-09,68;UBERON:0001017,9.94e-09,81;UBERON:0003528,1.07e-08,34;UBERON:0002020,1.07e-08,34;UBERON:0002346,1.56e-08,86;UBERON:0002791,1.13e-07,32;UBERON:0010371,1.25e-07,104;UBERON:0001869,2.11e-07,32;UBERON:0001893,2.35e-07,34;UBERON:0001016,3.78e-07,89 | |||
|phase1_expression=9.44727572206894,22.0523539607713,13.9544860055011,10.007329835313,10.2801051718276,10.4680622892044,0,9.47579810140246,8.35794010239483,3.44027511102112,3.48900583986214,4.58726881473362,3.4289707169699,4.20805600064159,2.65117900582333,10.0848771967766,13.2592796165275,13.8758917173601,9.27072317701963,2.09305798730539,3.26401105990805,1.56727360739044,3.43483184557268,3.55873505189499,2.25976751270645,2.8272960126742,2.70931945184821,3.85682828437028,0.786728553697808,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,0,1.00707360754392,2.70121541726101,0,0.553995408531877,4.41197784434312,3.25516306073778,11.867520134716,10.0407036465884,8.49999373192816,11.1956643860265,9.06902264853143,6.30718559088322,12.3187389560013,18.0913870729603,11.7688420940139,6.32923263108731,5.89169625016932,0.945928919554341,2.06847408441971,1.29096936716765,0,7.9061782607894,11.1891521523717,2.47195832889593,5.20342617030534,3.85114832491312,5.11469700639233,5.60747210317417,9.57425556583833,6.39337125799041,10.447532590629,6.80862269629368,4.35975574296902,11.5574386018102,13.037072960505,2.17188844705117,4.84319602106695,1.47311054395026,1.89877432464531,1.26753171787165,2.55125159958052,0.209658645508376,1.46027220490444,2.10247649978109,5.30394436100364,0,0.79566670879636,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,1.52909291250092,0,0,0.526768169550154,1.180258620683,1.96505381374582,0.822405995998037,0.334372990781356,0.32592226663359,0.473447805734733,1.94826728407911,0.557052284425868,0.294605907474837,0.443067789167242,2.16643091012012,1.28091319725675,1.8208308658383,1.97325485524411,1.38175008892924,1.44901542867526,1.18629250529648,1.07016331235885,0,1.0197840842781,0.383220493601921,0,2.02415753615602,0.318565414324097,0,0,0.752875595388864,0.255973222308837,0,1.4206635122641,0,0.80642697289893,1.60464117470104,1.30341963494519,29.2568239576754,8.04841031644363,3.45228916977532,48.4328464195319,3.50936537445123,26.3620664508699,3.1811437882044,10.705967146658,2.17430079477356,2.4390233720882,2.72287835648691,1.89919659471683,0.728590576585084,2.22470665670658,8.76277962867645,14.975157407737,16.2208711833015,0.476981248610684,0,0,0.39752481473341,0.860234595106124,2.42998351125316,2.26123176769604,3.77549492588915,3.57653454522088,0.417989933073621,1.8089173141853,2.13459757612026,3.68192674041137,4.43112248820062,0.760272105718513,2.92874469057803,3.30896772311282,1.62028389576352,2.76829157680647,3.36794058939255,2.25222960966644,0,0.949265659568129,1.46561395144326,0,0,3.48875241714027,8.44852317882041,6.33152558322899,9.66587019936497,17.2101972449288,10.6400514659507,2.80338800071154,4.2699598291882,7.15335890409764,0.933633106199299,1.61652806483626,1.79808093424805,2.57307626996383,2.88087962239999,1.87457145467037,5.30672130611545,0.570471821544449,18.0832903467679,1.64408298101271,1.61872944368132,0.842704840213491,3.26646674007829,3.93069815397658,4.64966015290945,5.94001428641027,10.3852110296994,0,5.74894513452991,2.02003336744879,3.25308151667107,1.38532057742091,3.07284334616587,5.51678032438235,3.90618953157152,3.97012641060074,15.2481190335533,8.5422955527427,8.26534414522291,9.30282397861647,6.90451945897541,7.72921620136887,9.49195967291108,16.7088568918854,5.65134629934952,10.3497847440087,7.27194199274165,8.24394889775941,13.4903645156313,3.72782763442269,5.08681776931463,3.09217365061275,4.09119180886252,2.86804595389004,2.6834215348511,3.18071443971565,3.137236457477,3.42081481550722,3.5324919122588,3.28479623168247,0,7.07565032012174,0,21.360924689471,2.88751792667834,3.90412440131485,3.70886318171824,3.85617647813571,3.74999507290139,3.4860711054785,2.13543557199987,4.85392709376592,2.94332197688019,3.07797725557112,2.95262181849859,2.80483547606892,4.5273141246454,4.41026134156626,12.6755034821831,7.86261773342101,12.9973779469909,0.441463099414651,3.81264159483652,15.9558063577629,7.24351883696929,0,3.51851403440708,4.90718759340207,2.28065813717227,4.15973914111831,4.3299402607582,8.23105875323045,3.75707821554629,2.45422961193825,10.1856812766854,12.3665198952489,0.790204397959275,0.858486162094873,11.5721992861077,5.6161023633417,7.43155811443641,0,6.88726725615324,2.55195175036296,8.23938408866204,5.23141089325132,0.383382679165211,6.89728533054321,3.69803422855549,2.28060927094849,1.15295962733569,0.75745460055828,6.54028311209341,2.67391897890794,7.03304683260282,3.4214489204541,6.16964956219941,8.10926256178577,10.5755780073314,1.23344192779897,2.61576041299968,6.1604160089598,5.8172272091,14.3062578340753,10.988935783228,10.6375246633948,12.4808924293639,2.57207374262142,1.41849132023278,2.39779961114489,17.8722492072684,5.96883765930587,3.29296134712308,5.21177894869976,9.24019066730619,2.37585561880029,11.7561357053239,2.61460037580088,18.0951114039523,36.4871341923571,24.1083403887421,160.233794007104,10.3038687861381,17.2292903751171,11.4109524032575,6.51515880004106,8.42452922456572,5.01370697071708,2.35378802386407,0.985153801009636,2.15627574859517,1.54011643535698,3.81141936333695,0,7.73288812777695,3.18280904135263,9.56908127479745,0,0,0.414415513436035,6.01188309423785,15.0051156317903,4.6115054028955,18.0934649531802,17.4860409021219,15.2971342582917,9.37131319941706,0.902838299183157,4.5481500811197,1.03473071292505,5.31380478828349,1.84369168541703,6.51627108510621,1.76221041716467,2.40200396667599,2.48121631347465,2.5885704098234,1.70764092485511,0.303127571446259,3.32870879020994,1.5119514666484,8.43566546583841,13.5046536493495,9.5424432107245,15.5048370599398,10.2341449813341,14.9594146663555,5.93672265779964,10.7946785661859,7.45759246315134,12.483327714099,28.0397391759155,5.34567740915813,4.23008073570678,7.21823293091825,4.8802924136025,4.70739237474888,13.1105640964836,14.9481833053744,1.35359883872224,6.7773496651885,0.784349769176855,2.92278449306521,8.12747542475143,2.27466768141793,4.25234263191289,7.1252252313706,1.54227252690289,2.43851793789468,3.51182841698397,2.80363900349542,3.3243040357149,4.92524460388792,2.85037839639715,1.3071772551245,3.07740150139667,3.60816110269676,2.92840555197873,0.9273691048295,5.76887628355563,3.79543699634705,0.574265537996172,7.80072295243825,14.4615536859744,2.70678011217942,2.7728751080636,2.91656981979646,1.7918754422989,5.6932729780185,4.64053420525531,3.15338521439573,4.71869788927708,3.30569830721956,2.30628080838127,2.16941611240793,3.2370489873776,1.39453664789186,30.8516099894027,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0,2.60510858551767,2.53103539774981,2.2875623270859,3.07077349573601,10.2705357128141,0.636406495851874,1.56989728039846,4.67668389716618,3.56898138656871,1.53156123049392,0.808729926293264,0,1.26377536871694,3.41343617362713,11.2108205230391,1.05650146756755,7.23449530462324,17.1100572663992,3.39024349860728,0.551365343546124,3.3171948762061,1.75380354101505,2.89387767133344,11.1502107847928,2.02910376962704,1.54911749049875,1.12678241012897,10.0387946542836,5.50194629673478,2.1400263088875,0.709522128141196,27.8662078592917,49.3942339439853,1.13841952129715,2.44954304171488,1.63577591633371,0,0,1.41215701165169,1.72202149068492,1.68471475667626,1.33029046061003,3.21612760289743,0.507447609232169,1.52927441428475,1.70894156152249,0.476463550915578,0.822724546172388,0,1.08006287447623,0.79312517629427,3.52519434720661,0.962479855263359,5.3908847515827,6.50311112940016,1.298422916788,0.924843963529383,2.23196781820351,3.39284931435788,0.383010740264733,2.32840940996271,0.973865820823666,9.5471040558576,1.36940807419915,2.6635582281414,0,1.18504244461122,1.4452926759333,1.81619736471943,3.40676990152261,5.839590860848,1.53620382154229,0.894704431569664,0.834245708559542,2.73543333562856,3.89768643453339,6.15436994738562,1.08182271390393,0.33307196799782,9.86909035614947,0.748562161632879,2.19762268907841,0.970884173996107,0.334330152832435,2.55722532125772,1.43246690842614,0.890894042497916,2.15012491469462,7.95318118213038,15.4736358051564,2.22617410045812,2.30725423917463,1.47787785689595,8.36841550654493,1.38141957765574,2.77126022639704,0.715880777515084,1.6001024709939,6.53183134089796,1.79736702294654,2.50629644545853,0,1.38100767891707,0,5.55684950723184,1.93866549219044,5.65885398787293,1.99613798001194,5.20855522170466,0.787139999965761,5.07499702804355,3.64139034513599,3.81380475439149,3.54581522651905,0.344743373241465,3.49925536059905,1.56262495439963,6.20018970069687,7.95936494927692,4.5774520895125,8.62518227463552,7.09314285488514,1.75508317723178,1.19832309870889,0.697118721393016,2.77020930613669,5.12739251311505,1.38338342632836,3.14151755434202,0.325942115766024,2.55200927785536,2.01514705484097,10.6606955203727,0,1.8837630767403,2.6593869104025,3.60953056987489,2.15668787749514,4.53118284834775,3.60532092175952,2.2251121057253,2.3209787098083,5.06021705293358,2.54435528581093,2.16388639742091,1.99052386215701,0.796118080530053,1.83309043480088,0,0.988511511572023,1.46190729307638,3.10045211711114,5.61804353109152,3.51396668588009,2.55436704901932,2.73930466504926,8.25453290415915,5.12959723704208,3.62972148145992,6.1214552326098,2.52746318513952,1.20258735531594,2.48851659353393,3.32326936353593,1.323967823502,2.19753042885058,2.38944859545918,6.54601955868523,9.42987776489343,3.47119476670262,2.15583274311631,3.65648667637691,4.71762004253481,15.3067568899739,2.90268993867255,3.65446585430928,3.28461828212837,0.775912131907355,4.85408696803251,2.48578814858586,4.93350928728303,2.58328995213887,3.98858014522036,3.51992488922645,5.37064095685276,2.13452994739353,5.19504984913539,2.16135625731159,3.20702469264564,3.26030495937733,2.0167671718341,5.21860649374817,2.59263438078475,8.01834815834323,7.00839070292632,6.32388949345195,5.49006120812886,13.2092463516154,11.5000518269274,0,4.29765441419957,1.57732412567589,7.26134243307861,13.5204650166893,3.58936512288407,1.39775300349294,3.004582336956,0.223171457441873,0.806201669840715,6.48539790376326,3.49487848582361,3.54524320382506,3.37905019362782,3.97680908739691,6.39778629845867,0.677386656526276,10.3379859675209,14.0289508294923,1.92903778158023,2.61324929534744,4.15440338029185,1.5748172408605,1.5476039091159,3.7057229561395,0.335434687599266,3.07342258466873,0.524545881349981,4.01281278773745,3.40645944732405,0.383830394638891,9.29103924285377,2.64836788146173,1.27134268827375,5.42999601753713,6.04955043840887,6.53174720218818,3.59190574687462,1.80603545648546,76.3338337598689,2.94611437952327,2.4913879725274,1.32506888912221,36.5870766503188,15.7356796073801,2.22412889249628,0.704815022316672,2.45611048905698,1.10043013569766,11.1844544943743,7.44249032717926,2.37133958277533,0.243585196761792,3.19170628885091,1.08803560673895,2.7575888342497,0.919036730290385,1.31149052283922,3.61224421375539,13.2910226995048,14.5211255233336,15.523675407606,9.74795632673121,10.6491889475378,4.78142302648653,2.21357815897969,1.99968652739371,3.4879297034579,9.70582134052889,1.88212655758537,2.81000943484129,1.30428925749743,5.97019211547496,5.37540612648616,6.65767033803136,11.1747773112303,9.30801236484528,12.4573571023515,10.2978030778616,10.132471892137,5.28486481981454,5.61849569960609,7.00905775520291,9.8956684675993,5.89999236129786,17.0029545214751,9.57030172408781,8.34792098898774,10.0672598028136,19.0402606084398,5.69619026486526,5.27361111687422,7.19650732184673,9.74470895744837,14.3314519931502,4.00027764663154,9.27168403993541,3.70424437642511,1.26184898228651,5.9712147426264,5.36103978437314,3.91491437947817,16.7762384879082,7.87176412701035,9.54473147575224,5.90993175568908,9.26404341482917,8.99064603272699,10.6013487567529,8.48821768392025,18.583668471838,2.30617366729152,5.18145512596798,16.4084376335786,20.4622485504562,11.3018979126845,7.04183653660824,11.1224468093974,7.53502652346749,5.16123108382811,1.26787274015176,1.39991177098451,0.746842107858986,6.37195424745018,5.67515953566836,3.49801305478497,0.699397538597222,1.86623178009892,1.40683808434017,1.83302179374359,0.629063767423586,1.09209638192014,1.69732529954025,5.10179808244039,0.743614585554013,2.23457967189298,3.81605220784102,0,0.80057074828547,3.87943538059752,7.04364597912361,4.23912885636633,8.5017945795351,22.189106408944,6.76884001994492,13.8639432921945,2.76629009856872,14.5328081068666,1.42769420259154,5.29997679905538,2.24142474360707,4.21885776599862,2.77261598760812,3.4324388592045,0,4.77398933079059,3.61009576076435,7.46308754203024,2.34454203369928,0.785720083444267,7.04219245293416,2.95712172434091,3.44441681553813,16.4026400708908,19.4285588711113,3.42445375047097,12.0334457984008,2.74128883428591,5.95453414067153,1.93458368795583,2.42748612515231,32.1421101526972,27.5752652219436,19.4228993355722,23.2215435178324,1.77404740325278,1.72850981333669,7.20249639637158,8.08839822424297,2.03895598044832,8.62815038452968,8.89851215136553,1.17739639275771,8.4842418554641,4.20408244970683,1.82631744101899,7.98932087508899,7.6440270061928,1.85839014859306,3.95034029331817,2.90603563420313,1.73858272302579,10.4222477414933,13.4690506705974,10.7552640569188,9.67763526539729,0,6.38992803945053,5.79451152362272,1.27016115057279,1.3746412112643,2.48165108531456,6.68877257284203,4.02679554472052,2.15930513953535,3.29178397452127,3.23714418593947,0.513314034281235,3.4794432940146,3.88568794447312,0.935757853848423,3.58111395290463,2.97300226943921,1.1294608203896,3.29821550236287,3.47214540203349,1.54348316215889,5.46398901259893,5.64380755633827,3.43207650455468,2.12108892391463,21.7902398497589,11.8818560130834,5.4945244585842,7.13693881688831,4.22927630909341,0.515663103788617,6.09641051142066,6.78504966701499,2.11736923029415,4.8144820013501,2.19100916473955,0.917458566809082,6.02026249236095,3.47097436825006,3.46756599973665,10.4724165681691,2.645134202577,16.7397758175038,8.78133694399695,20.7660749819419,2.01866279736126,1.31118686356435,1.90047751517155,0.815910637935854,0.801652215796681,1.01084389488329,4.76344324655513,2.34913964476542,11.2544934665595,6.63335551567024,9.41240262343246,2.13233981900981,2.14257988317366,0.387533459016037,0.434523000071005,3.58821960257963,1.0820016907288,5.05292972395548,1.95945073107265,3.42233301085281,0.875576689189638,1.5061663132462,2.32862249582209,1.79087190944144,4.05563914335319,7.7228912914776,2.51510565898443,14.0784565442073,2.07810455110873,2.44137706989443,1.99727032255654,2.81783311027437,0.320568492303233 | |||
|short_description=p@chr12:113828372..113828491,+ | |||
}} |
Latest revision as of 05:14, 24 July 2015
Short description: | p@chr12:113828372..113828491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113828372..113828491, + |
Coexpression cluster: | C660_Monocytederived_liposarcoma_Smooth_Synoviocyte_pituitary_Chondrocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.77e-12 | 56 |
neural rod | 2.77e-12 | 56 |
future spinal cord | 2.77e-12 | 56 |
neural keel | 2.77e-12 | 56 |
regional part of nervous system | 3.05e-11 | 53 |
regional part of brain | 3.05e-11 | 53 |
regional part of forebrain | 8.22e-10 | 41 |
forebrain | 8.22e-10 | 41 |
anterior neural tube | 8.22e-10 | 41 |
future forebrain | 8.22e-10 | 41 |
neural plate | 1.57e-09 | 82 |
presumptive neural plate | 1.57e-09 | 82 |
brain | 6.77e-09 | 68 |
future brain | 6.77e-09 | 68 |
central nervous system | 9.94e-09 | 81 |
brain grey matter | 1.07e-08 | 34 |
gray matter | 1.07e-08 | 34 |
neurectoderm | 1.56e-08 | 86 |
regional part of telencephalon | 1.13e-07 | 32 |
ecto-epithelium | 1.25e-07 | 104 |
cerebral hemisphere | 2.11e-07 | 32 |
telencephalon | 2.35e-07 | 34 |
nervous system | 3.78e-07 | 89 |