FFCP PHASE1:Hg19::chr12:117257372..117257379,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117257372..117257379,- | |||
|description=CAGE_peak_at_chr12:117257372..117257379,- | |description=CAGE_peak_at_chr12:117257372..117257379,- | ||
|id=chr12:117257372..117257379,- | |id=chr12:117257372..117257379,- | ||
|ontology_enrichment_celltype=CL:0002087!8.42e-16!119;CL:0002031!1.38e-15!124;CL:0000738!1.94e-15!140;CL:0000037!3.46e-12!172;CL:0000566!3.46e-12!172;CL:0000988!1.10e-11!182;CL:0000838!1.33e-11!52;CL:0000542!2.78e-11!53;CL:0000051!2.78e-11!53;CL:0000945!1.06e-10!24;CL:0000826!1.06e-10!24;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0002057!1.77e-09!42;CL:0000860!1.42e-08!45;CL:0000236!1.83e-07!14;CL:0000623!2.11e-07!3;CL:0000825!2.11e-07!3 | |ontology_enrichment_celltype=CL:0002087!8.42e-16!119;CL:0002031!1.38e-15!124;CL:0000738!1.94e-15!140;CL:0000037!3.46e-12!172;CL:0000566!3.46e-12!172;CL:0000988!1.10e-11!182;CL:0000838!1.33e-11!52;CL:0000542!2.78e-11!53;CL:0000051!2.78e-11!53;CL:0000945!1.06e-10!24;CL:0000826!1.06e-10!24;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0002057!1.77e-09!42;CL:0000860!1.42e-08!45;CL:0000236!1.83e-07!14;CL:0000623!2.11e-07!3;CL:0000825!2.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.97e-35;13!CL:0000945;2.27e-19;24!CL:0000542;1.41e-09;53 | |ontology_enrichment_celltype_v019=CL:0000236;7.97e-35;13!CL:0000945;2.27e-19;24!CL:0000542;1.41e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.02e-32,14;CL:0000945,2.27e-19,24;CL:0000826,2.27e-19,24;CL:0000838,1.89e-09,52;CL:0000542,2.74e-09,53;CL:0000051,2.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.41e-09;53 | |ontology_enrichment_development_v019=CL:0000051;1.41e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.30e-07!102;UBERON:0003061!3.30e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!3.30e-07!102;UBERON:0003061!3.30e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.32e-26;2!UBERON:0005058;4.32e-26;2!UBERON:0009113;4.32e-26;2!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;4.32e-26;2!UBERON:0005058;4.32e-26;2!UBERON:0009113;4.32e-26;2!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0003351,1.22e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7 | |||
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| ||
|short_description=p@chr12:117257372..117257379,- | |short_description=p@chr12:117257372..117257379,- | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117257372..117257379, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117257372..117257379, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.02e-32 | 14 |
lymphocyte of B lineage | 2.27e-19 | 24 |
pro-B cell | 2.27e-19 | 24 |
lymphoid lineage restricted progenitor cell | 1.89e-09 | 52 |
lymphocyte | 2.74e-09 | 53 |
common lymphoid progenitor | 2.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
pharyngeal epithelium | 1.22e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |