FFCP PHASE1:Hg19::chr12:12272276..12272282,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:12272276..12272282,-
|short_description=p@chr12:12272276..12272282,-
|description=CAGE_peak_at_chr12:12272276..12272282,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:12272276..12272282,- | |||
|description=CAGE_peak_at_chr12:12272276..12272282,- | |||
|id=chr12:12272276..12272282,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.22e-26;1!CL:0000632;1.35e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.58e-26,1;CL:0000632,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.22e-26;1!UBERON:0004161;6.31e-21;11!UBERON:0009497;7.86e-18;13!UBERON:0001041;1.15e-13;30!UBERON:0003056;1.35e-09;3!UBERON:0003104;1.00e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!6.41e-11!143;DOID:305!1.26e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3571;5.22e-26;1!DOID:3350;1.00e-13;2!DOID:4556;1.35e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,9.79e-26,1;DOID:3350,1.37e-13,2;DOID:4556,1.01e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.28e-07!155;UBERON:0001555!1.28e-07!155;UBERON:0007026!1.28e-07!155;UBERON:0004921!2.27e-07!129;UBERON:0004185!2.27e-07!129;UBERON:0000077!8.06e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.22e-26;1!UBERON:0000941;5.22e-26;1!UBERON:0001785;5.22e-26;1!UBERON:0002464;5.22e-26;1!UBERON:0004904;5.22e-26;1!UBERON:0001021;5.22e-26;1!UBERON:0009661;5.22e-26;1!UBERON:0002950;5.22e-26;1!UBERON:0001891;5.22e-26;1!UBERON:0001897;1.00e-13;2!UBERON:0003714;1.00e-13;2!UBERON:0005162;1.00e-13;2!UBERON:0000122;1.00e-13;2!UBERON:0005406;1.00e-13;2!UBERON:0010225;1.00e-13;2!UBERON:0002107;1.95e-12;19!UBERON:0006925;1.95e-12;19!UBERON:0002423;1.29e-09;25!UBERON:0002784;1.64e-07;4!UBERON:0002368;2.47e-07;33!UBERON:0002365;2.47e-07;31!UBERON:0002330;2.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0002038,1.26e-25,1;UBERON:0009661,1.26e-25,1;UBERON:0002950,1.26e-25,1;UBERON:0001891,1.26e-25,1;UBERON:0009616,1.26e-25,1;UBERON:0010286,1.26e-25,1;UBERON:0001897,7.30e-14,2;UBERON:0010225,7.30e-14,2;UBERON:0005406,8.28e-14,2;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0002107,2.33e-12,19;UBERON:0006925,2.33e-12,19;UBERON:0008836,2.33e-12,19;UBERON:0008835,9.07e-11,22;UBERON:0003894,9.07e-11,22;UBERON:0009854,2.49e-10,23;UBERON:0007499,1.48e-09,25;UBERON:0009497,1.48e-09,25;UBERON:0000015,1.48e-09,25;UBERON:0002423,1.48e-09,25;UBERON:0006235,1.48e-09,25;UBERON:0004161,1.48e-09,25;UBERON:0009856,3.25e-09,26;UBERON:0002365,7.90e-08,31;UBERON:0002330,7.90e-08,31;UBERON:0002784,1.40e-07,4;UBERON:0001781,1.59e-07,4;UBERON:0002368,5.30e-07,35 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0.669514372325618,0,1.08089965062721,1.16495949527454,0,0.0824158583811665,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0.77380195455795,0,0,0.315222829196793,0.104909176269996,1.6896053843105,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,1.32506888912221,0.775697738169303,0,0.342173675768659,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0.127894371303652,0.107824811396682,0,0,0.33946505990805,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0.581207126840626,0.521574816907738,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,0.196300467230486,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0.730336388246517,0.458729283404541,1.00337708206016,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0.203977659483963,0,0.459474497674225,0.250707539292375,0.151557396436479,0.267964130156178,1.65833887891756,0.20686599172379,0,0.714193294391221,0.0645889098360061,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,0,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0.669514372325618,0,1.08089965062721,1.16495949527454,0,0.0824158583811665,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0.77380195455795,0,0,0.315222829196793,0.104909176269996,1.6896053843105,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,1.32506888912221,0.775697738169303,0,0.342173675768659,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0.151649117541648,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0.127894371303652,0.107824811396682,0,0,0.33946505990805,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0.80682027481408,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0.581207126840626,0.521574816907738,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,0.196300467230486,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0.730336388246517,0.458729283404541,1.00337708206016,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0.203977659483963,0,0.459474497674225,0.250707539292375,0.151557396436479,0.267964130156178,1.65833887891756,0.20686599172379,0,0.714193294391221,0.0645889098360061,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr12:12272276..12272282,- | |||
}} | }} |
Latest revision as of 06:05, 24 July 2015
Short description: | p@chr12:12272276..12272282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12272276..12272282, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.58e-26 | 1 |
hepatic stellate cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.79e-26 | 1 |
mesenchymal cell neoplasm | 1.37e-13 | 2 |
lung large cell carcinoma | 1.01e-09 | 3 |