FFCP PHASE1:Hg19::chr12:125305957..125305968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125305957..125305968,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr12:125305957..125305968,- | |description=CAGE_peak_at_chr12:125305957..125305968,- | ||
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|ontology_enrichment_celltype=CL:0000148!4.08e-29!10;CL:0000541!4.08e-29!10;CL:0002619!1.33e-25!3;CL:0000147!1.10e-20!14;CL:0000710!2.41e-14!20;CL:0002567!4.12e-12!3;CL:0000075!1.69e-10!27;CL:0002566!7.98e-10!1;CL:0000325!1.72e-09!39;CL:0002077!1.70e-08!33 | |ontology_enrichment_celltype=CL:0000148!4.08e-29!10;CL:0000541!4.08e-29!10;CL:0002619!1.33e-25!3;CL:0000147!1.10e-20!14;CL:0000710!2.41e-14!20;CL:0002567!4.12e-12!3;CL:0000075!1.69e-10!27;CL:0002566!7.98e-10!1;CL:0000325!1.72e-09!39;CL:0002077!1.70e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002619;2.69e-66;3!CL:0000148;1.31e-35;10!CL:0002567;2.30e-30;3!CL:0000147;1.31e-25;14!CL:0002566;1.07e-23;1!CL:0000710;4.35e-18;20!CL:0000075;1.61e-13;27!CL:0002077;9.84e-11;34 | |ontology_enrichment_celltype_v019=CL:0002619;2.69e-66;3!CL:0000148;1.31e-35;10!CL:0002567;2.30e-30;3!CL:0000147;1.31e-25;14!CL:0002566;1.07e-23;1!CL:0000710;4.35e-18;20!CL:0000075;1.61e-13;27!CL:0002077;9.84e-11;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.41e-66,3;CL:0000148,1.49e-35,10;CL:0000541,1.49e-35,10;CL:0002567,2.30e-30,3;CL:0000147,1.44e-25,14;CL:0002566,1.07e-23,1;CL:0000710,4.65e-18,20;CL:0000075,1.69e-13,27;CL:0002077,8.38e-11,34;CL:0000333,1.28e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.61e-09;11!UBERON:0009497;1.13e-07;13 | |ontology_enrichment_development_v019=UBERON:0004161;6.61e-09;11!UBERON:0009497;1.13e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!4.15e-09!1;UBERON:0001961!4.15e-09!1;UBERON:0001744!4.15e-09!1;UBERON:0001735!4.15e-09!1 | |ontology_enrichment_uberon=UBERON:0002372!4.15e-09!1;UBERON:0001961!4.15e-09!1;UBERON:0001744!4.15e-09!1;UBERON:0001735!4.15e-09!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:125305957..125305968,- | |short_description=p@chr12:125305957..125305968,- | ||
}} | }} |
Latest revision as of 06:28, 24 July 2015
Short description: | p@chr12:125305957..125305968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125305957..125305968, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.41e-66 | 3 |
melanocyte | 1.49e-35 | 10 |
melanoblast | 1.49e-35 | 10 |
light melanocyte | 2.30e-30 | 3 |
pigment cell | 1.44e-25 | 14 |
dark melanocyte | 1.07e-23 | 1 |
neurecto-epithelial cell | 4.65e-18 | 20 |
columnar/cuboidal epithelial cell | 1.69e-13 | 27 |
ecto-epithelial cell | 8.38e-11 | 34 |
migratory neural crest cell | 1.28e-08 | 41 |