FFCP PHASE1:Hg19::chr12:127614736..127614764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:127614736..127614764,+ | |||
|description=CAGE_peak_at_chr12:127614736..127614764,+ | |description=CAGE_peak_at_chr12:127614736..127614764,+ | ||
|id=chr12:127614736..127614764,+ | |id=chr12:127614736..127614764,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002573;2.22e-09;2!CL:0002541;5.39e-09;3!CL:0000167;1.05e-07;1!CL:0000164;1.05e-07;1!CL:0000502;1.05e-07;1!CL:0000172;1.05e-07;1!CL:0000173;1.05e-07;1!CL:0002327;4.03e-07;4 | |ontology_enrichment_celltype_v019=CL:0002573;2.22e-09;2!CL:0002541;5.39e-09;3!CL:0000167;1.05e-07;1!CL:0000164;1.05e-07;1!CL:0000502;1.05e-07;1!CL:0000172;1.05e-07;1!CL:0000173;1.05e-07;1!CL:0002327;4.03e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.22e-09,2;CL:0002541,4.99e-09,3;CL:0000167,1.06e-07,1;CL:0000164,1.06e-07,1;CL:0000502,1.06e-07,1;CL:0000172,1.06e-07,1;CL:0000173,1.06e-07,1;CL:0002351,1.06e-07,1;CL:0002327,3.97e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.05e-07;1 | |ontology_enrichment_development_v019=CL:0002351;1.05e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.05e-07;1!DOID:5662;1.53e-07;1!DOID:3112;3.96e-07;1 | |ontology_enrichment_disease_v019=DOID:4430;1.05e-07;1!DOID:5662;1.53e-07;1!DOID:3112;3.96e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,1.06e-07,1;DOID:5662,1.54e-07,1;DOID:3112,4.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003124!6.27e-09!7;UBERON:0005631!3.92e-07!14;UBERON:0000158!3.92e-07!14 | |ontology_enrichment_uberon=UBERON:0003124!6.27e-09!7;UBERON:0005631!3.92e-07!14;UBERON:0000158!3.92e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.39e-09;3!UBERON:0000920;5.39e-09;3!UBERON:0001911;4.03e-07;4!UBERON:0002368;5.00e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0003124;5.39e-09;3!UBERON:0000920;5.39e-09;3!UBERON:0001911;4.03e-07;4!UBERON:0002368;5.00e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.99e-09,3;UBERON:0003124,2.85e-08,7;UBERON:0002368,1.78e-07,35;UBERON:0000076,2.39e-07,8;UBERON:0000949,3.08e-07,45;UBERON:0001911,3.97e-07,4;UBERON:0005333,3.97e-07,4;UBERON:0008425,3.97e-07,4;UBERON:0005311,3.97e-07,4;UBERON:0005631,5.31e-07,14;UBERON:0000158,5.31e-07,14;UBERON:0002530,9.28e-07,59 | |||
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| ||
|short_description=p@chr12:127614736..127614764,+ | |short_description=p@chr12:127614736..127614764,+ | ||
}} | }} |
Latest revision as of 06:35, 24 July 2015
Short description: | p@chr12:127614736..127614764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127614736..127614764, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.22e-09 | 2 |
chorionic membrane mesenchymal stem cell | 4.99e-09 | 3 |
peptide hormone secreting cell | 1.06e-07 | 1 |
enteroendocrine cell | 1.06e-07 | 1 |
type D enteroendocrine cell | 1.06e-07 | 1 |
somatostatin secreting cell | 1.06e-07 | 1 |
pancreatic D cell | 1.06e-07 | 1 |
progenitor cell of endocrine pancreas | 1.06e-07 | 1 |
mammary gland epithelial cell | 3.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.99e-09 | 3 |
chorion | 2.85e-08 | 7 |
endocrine gland | 1.78e-07 | 35 |
external ectoderm | 2.39e-07 | 8 |
endocrine system | 3.08e-07 | 45 |
mammary gland | 3.97e-07 | 4 |
mammary bud | 3.97e-07 | 4 |
mammary ridge | 3.97e-07 | 4 |
mammary placode | 3.97e-07 | 4 |
extraembryonic membrane | 5.31e-07 | 14 |
membranous layer | 5.31e-07 | 14 |
gland | 9.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.06e-07 | 1 |
pleomorphic carcinoma | 1.54e-07 | 1 |
papillary adenocarcinoma | 4.08e-07 | 1 |