FFCP PHASE1:Hg19::chr12:15068493..15068509,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15068493..15068509,- to FFCP PHASE1:Hg19::chr12:15068493..15068509,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:15068493..15068509,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_at_chr12:15068493..15068509,- | |||
|id=chr12:15068493..15068509,- | |||
|ontology_enrichment_celltype=CL:0002541!2.80e-08!3;CL:0000842!6.12e-08!3;CL:0002087!1.35e-07!119;CL:0000542!2.39e-07!53;CL:0000051!2.39e-07!53;CL:0000791!2.47e-07!18;CL:0000789!2.47e-07!18;CL:0002420!2.47e-07!18;CL:0002419!2.47e-07!18;CL:0000790!2.47e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.48e-18;1!CL:0000349;3.70e-14;19!CL:0002537;4.11e-14;5!CL:0000771;9.87e-10;2!CL:0002541;8.86e-07;3!CL:0002577;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.01e-14,19;CL:0002537,4.11e-14,5;CL:0000771,9.46e-10,2;CL:0002577,7.28e-07,3;CL:0002541,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.80e-08!3;UBERON:0000920!2.80e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.07e-15;10!UBERON:0000158;2.07e-15;10!UBERON:0000478;2.80e-11;24!UBERON:0000305;2.35e-10;7!UBERON:0002114;6.14e-07;2!UBERON:0003124;8.86e-07;3!UBERON:0000920;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.39e-19,14;UBERON:0000158,3.39e-19,14;UBERON:0000478,2.38e-11,24;UBERON:0003124,1.77e-10,7;UBERON:0000305,2.35e-10,7;UBERON:0004871,3.55e-09,8;UBERON:0002114,6.14e-07,2;UBERON:0000920,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,1.17903228824749,0.205601498999509,0.334372990781356,0,0,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0.651083453856419,0,0,0.383959833463255,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.651884231532048,0.638002319463839,0.274792780205587,1.5991043280559,1.02193298195737,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,28.1345044043913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0.160482733378337,0,0,0,0,0,0,8.99345628876181,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,1.17903228824749,0.205601498999509,0.334372990781356,0,0,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0.651083453856419,0,0,0.383959833463255,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.651884231532048,0.638002319463839,0.274792780205587,1.5991043280559,1.02193298195737,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,28.1345044043913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0.160482733378337,0,0,0,0,0,0,8.99345628876181,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:15068493..15068509,- | |||
}} | }} |
Latest revision as of 07:06, 24 July 2015
Short description: | p@chr12:15068493..15068509, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:15068493..15068509, - |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.01e-14 | 19 |
amnion mesenchymal stem cell | 4.11e-14 | 5 |
eosinophil | 9.46e-10 | 2 |
placental epithelial cell | 7.28e-07 | 3 |
chorionic membrane mesenchymal stem cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.39e-19 | 14 |
membranous layer | 3.39e-19 | 14 |
extraembryonic structure | 2.38e-11 | 24 |
chorion | 1.77e-10 | 7 |
amnion | 2.35e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.55e-09 | 8 |
duodenum | 6.14e-07 | 2 |
egg chorion | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.44e-09 | 2 |