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FFCP PHASE1:Hg19::chr12:25108523..25108540,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:25108523..25108540,+
|DHSsupport=supported 
|short_description=p@chr12:25108523..25108540,+
|DPIdataset=robust
|description=CAGE_peak_at_chr12:25108523..25108540,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr12:25108523..25108540,+
|coexpression_cluster_id=C0
|description=CAGE_peak_at_chr12:25108523..25108540,+
|id=chr12:25108523..25108540,+
|ontology_enrichment_celltype=CL:0002057!1.74e-49!42;CL:0000860!9.73e-46!45;CL:0002009!3.63e-37!65;CL:0002194!1.51e-35!63;CL:0000576!1.51e-35!63;CL:0000040!1.51e-35!63;CL:0000559!1.51e-35!63;CL:0000738!4.11e-34!140;CL:0000557!1.87e-33!71;CL:0002031!2.28e-31!124;CL:0000839!2.44e-31!70;CL:0002087!5.98e-31!119;CL:0000766!1.29e-30!76;CL:0000988!9.69e-29!182;CL:0002032!1.73e-27!165;CL:0000837!1.73e-27!165;CL:0000037!5.59e-26!172;CL:0000566!5.59e-26!172;CL:0000763!1.83e-25!112;CL:0000049!1.83e-25!112;CL:0000453!7.18e-12!5;CL:0000134!2.90e-10!358;CL:0002320!7.13e-10!365;CL:0000219!1.68e-08!390;CL:0000034!6.59e-07!444;CL:0000048!7.18e-07!430
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-61;33!CL:0002057;1.24e-61;33!CL:0000473;6.71e-41;39!CL:0000234;6.71e-41;39!CL:0000576;2.07e-30;48!CL:0000766;8.76e-17;69!CL:0002087;2.89e-14;104!CL:0000453;1.10e-11;5!CL:0000738;1.11e-09;136!CL:0000763;6.70e-08;100
|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-56,42;CL:0002057,1.59e-56,42;CL:0000473,5.91e-49,48;CL:0000234,5.91e-49,48;CL:0002009,5.32e-41,61;CL:0002194,2.37e-38,59;CL:0000576,2.37e-38,59;CL:0000040,2.37e-38,59;CL:0000559,2.37e-38,59;CL:0000557,5.22e-37,67;CL:0000839,6.42e-34,66;CL:0000738,5.37e-31,136;CL:0000766,8.54e-31,72;CL:0002031,2.20e-30,120;CL:0002087,3.12e-29,115;CL:0000988,1.20e-26,177;CL:0000763,3.26e-26,108;CL:0000049,3.26e-26,108;CL:0002032,2.03e-25,161;CL:0000837,2.03e-25,161;CL:0000037,3.75e-24,168;CL:0000453,9.49e-12,5;CL:0000134,1.02e-08,354;CL:0002320,1.92e-08,361;CL:0000219,1.76e-07,386;CL:0000990,9.84e-07,8
|ontology_enrichment_development_v019=CL:0002057;1.21e-40;42!CL:0000049;2.21e-07;108
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:630;1.01e-07;1!DOID:0050177;1.01e-07;1!DOID:0050427;1.01e-07;1!DOID:0060060;2.04e-07;1!DOID:0060061;2.04e-07;1!DOID:8691;2.04e-07;1
|ontology_enrichment_disease_v019_2=DOID:630,1.01e-07,1;DOID:0050177,1.01e-07,1;DOID:0050427,1.01e-07,1;DOID:0060060,1.39e-07,1;DOID:0060061,1.39e-07,1;DOID:8691,1.39e-07,1
|ontology_enrichment_uberon=UBERON:0002390!7.49e-31!102;UBERON:0003061!7.49e-31!102;UBERON:0002371!6.40e-29!80;UBERON:0002193!2.23e-27!112;UBERON:0001474!2.02e-26!86;UBERON:0004765!1.81e-21!101;UBERON:0001434!1.81e-21!101;UBERON:0002405!4.25e-21!115;UBERON:0003081!3.20e-11!216;UBERON:0002204!2.66e-10!167;UBERON:0002384!4.19e-10!375
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-32,76;UBERON:0001474,1.50e-29,82;UBERON:0002390,2.31e-29,98;UBERON:0003061,2.31e-29,98;UBERON:0004765,1.41e-26,90;UBERON:0002193,3.01e-26,108;UBERON:0002405,1.36e-25,93;UBERON:0001434,1.61e-23,100;UBERON:0002204,1.99e-12,167;UBERON:0003081,7.21e-12,203;UBERON:0002384,5.62e-09,371
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.06730766284929,1.10195093839151,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0,0,0,0,0,0.377875943688809,0,1.16214518452842,1.23350366406548,6.81354015969228,1.43846196161075,0.768482119587302,1.89185783910868,6.89491361473237,8.39130088658974,10.8341189275473,0.564727018627814,1.09162460023138,0.898893937780338,6.12167784741805,10.269728866435,8.95071976118658,0,0,0,8.70627715885752,17.5889419654253,6.85104473895132,0,0,1.08594422352558,4.23779651843358,19.1504370713534,11.7091083353127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.741383633679017,1.25306339406546,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.398594520940089,1.14495775979091,0,0,0,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62216589314576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,3.20568492303233
|short_description=p@chr12:25108523..25108540,+
}}
}}

Latest revision as of 07:44, 24 July 2015

Short description:p@chr12:25108523..25108540, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr12:25108523..25108540, +
Coexpression cluster:C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data