FFCP PHASE1:Hg19::chr12:28947878..28947885,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:28947878..28947885,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr12:28947878..28947885,- | |||
|id=chr12:28947878..28947885,- | |||
|ontology_enrichment_celltype=CL:0000148!2.34e-54!10;CL:0000541!2.34e-54!10;CL:0000147!1.05e-38!14;CL:0000710!6.01e-27!20;CL:0000075!8.09e-20!27;CL:0002567!2.73e-16!3;CL:0002077!4.16e-16!33;CL:0000325!1.56e-13!39;CL:0002566!1.11e-12!1;CL:0000333!3.24e-12!41;CL:0000453!8.49e-10!5;CL:0000133!2.05e-08!59;CL:0000221!6.46e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.03e-82;10!CL:0000147;7.70e-59;14!CL:0002567;4.99e-45;3!CL:0000710;1.99e-41;20!CL:0002566;5.05e-34;1!CL:0000075;7.09e-31;27!CL:0002077;2.86e-22;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.03e-82,10;CL:0000541,5.03e-82,10;CL:0000147,7.71e-59,14;CL:0002567,5.00e-45,3;CL:0000710,1.99e-41,20;CL:0002566,7.06e-34,1;CL:0000075,7.10e-31,27;CL:0002077,1.18e-24,34;CL:0000333,1.27e-19,41;CL:0000133,5.41e-14,59;CL:0000221,1.28e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000133;6.94e-09;59 | |||
|ontology_enrichment_disease=DOID:1909!5.41e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002135!1.57e-12!1;UBERON:0002133!6.80e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,2.09543051164158,3.81988425558278,7.03304683260282,0,1.33675740514321,0.600686115687835,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:28947878..28947885,- | |||
}} |
Latest revision as of 07:58, 24 July 2015
Short description: | p@chr12:28947878..28947885, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28947878..28947885, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.03e-82 | 10 |
melanoblast | 5.03e-82 | 10 |
pigment cell | 7.71e-59 | 14 |
light melanocyte | 5.00e-45 | 3 |
neurecto-epithelial cell | 1.99e-41 | 20 |
dark melanocyte | 7.06e-34 | 1 |
columnar/cuboidal epithelial cell | 7.10e-31 | 27 |
ecto-epithelial cell | 1.18e-24 | 34 |
migratory neural crest cell | 1.27e-19 | 41 |
neurectodermal cell | 5.41e-14 | 59 |
ectodermal cell | 1.28e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.07e-18 | 2 |