FFCP PHASE1:Hg19::chr12:56351078..56351092,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56351078..56351092,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr12:56351078..56351092,- | |description=CAGE_peak_at_chr12:56351078..56351092,- | ||
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|ontology_enrichment_celltype=CL:0000147!4.97e-108!14;CL:0000148!4.82e-90!10;CL:0000541!4.82e-90!10;CL:0000710!2.23e-44!20;CL:0002322!2.69e-44!5;CL:0000325!1.53e-43!39;CL:0000149!5.01e-37!4;CL:0000075!1.62e-32!27;CL:0002567!1.56e-28!3;CL:0002586!6.24e-28!3;CL:0002077!2.40e-26!33;CL:0000333!6.98e-20!41;CL:0000133!1.98e-16!59;CL:0000221!1.91e-13!71;CL:0002566!1.08e-10!1 | |ontology_enrichment_celltype=CL:0000147!4.97e-108!14;CL:0000148!4.82e-90!10;CL:0000541!4.82e-90!10;CL:0000710!2.23e-44!20;CL:0002322!2.69e-44!5;CL:0000325!1.53e-43!39;CL:0000149!5.01e-37!4;CL:0000075!1.62e-32!27;CL:0002567!1.56e-28!3;CL:0002586!6.24e-28!3;CL:0002077!2.40e-26!33;CL:0000333!6.98e-20!41;CL:0000133!1.98e-16!59;CL:0000221!1.91e-13!71;CL:0002566!1.08e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.60e-120;10!CL:0000147;8.56e-86;14!CL:0002567;9.64e-74;3!CL:0000710;3.47e-60;20!CL:0000075;1.12e-44;27!CL:0002077;2.78e-31;34!CL:0002566;7.62e-26;1!CL:0000149;1.31e-07;4 | |ontology_enrichment_celltype_v019=CL:0000148;6.60e-120;10!CL:0000147;8.56e-86;14!CL:0002567;9.64e-74;3!CL:0000710;3.47e-60;20!CL:0000075;1.12e-44;27!CL:0002077;2.78e-31;34!CL:0002566;7.62e-26;1!CL:0000149;1.31e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.21e-120,10;CL:0000541,7.21e-120,10;CL:0000147,9.12e-86,14;CL:0002567,9.64e-74,3;CL:0000710,3.63e-60,20;CL:0000075,1.16e-44,27;CL:0002077,1.58e-35,34;CL:0000333,3.83e-28,41;CL:0002566,7.62e-26,1;CL:0000133,6.85e-20,59;CL:0000221,2.04e-16,72;CL:0000149,1.31e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;9.58e-11;59!CL:0000221;4.92e-09;72 | |ontology_enrichment_development_v019=CL:0000133;9.58e-11;59!CL:0000221;4.92e-09;72 | ||
|ontology_enrichment_disease=DOID:1909!1.64e-19!2 | |ontology_enrichment_disease=DOID:1909!1.64e-19!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.00e-13;2 | |ontology_enrichment_disease_v019=DOID:1909;1.00e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.57e-29!5;UBERON:0005388!2.57e-29!5;UBERON:0001802!2.57e-29!5;UBERON:0001781!6.24e-28!3;UBERON:0001782!6.24e-28!3;UBERON:0005424!6.24e-28!3;UBERON:0000970!3.26e-11!20;UBERON:0002104!1.13e-10!21;UBERON:0000020!9.86e-10!23;UBERON:0001032!2.55e-09!24;UBERON:0004456!2.55e-09!24;UBERON:0007625!4.96e-08!11;UBERON:0000019!7.05e-08!19;UBERON:0000047!7.05e-08!19;UBERON:0004088!7.05e-08!19;UBERON:0003072!7.05e-08!19;UBERON:0003071!7.05e-08!19;UBERON:0004128!7.05e-08!19;UBERON:0001456!3.86e-07!21 | |ontology_enrichment_uberon=UBERON:0000966!2.57e-29!5;UBERON:0005388!2.57e-29!5;UBERON:0001802!2.57e-29!5;UBERON:0001781!6.24e-28!3;UBERON:0001782!6.24e-28!3;UBERON:0005424!6.24e-28!3;UBERON:0000970!3.26e-11!20;UBERON:0002104!1.13e-10!21;UBERON:0000020!9.86e-10!23;UBERON:0001032!2.55e-09!24;UBERON:0004456!2.55e-09!24;UBERON:0007625!4.96e-08!11;UBERON:0000019!7.05e-08!19;UBERON:0000047!7.05e-08!19;UBERON:0004088!7.05e-08!19;UBERON:0003072!7.05e-08!19;UBERON:0003071!7.05e-08!19;UBERON:0004128!7.05e-08!19;UBERON:0001456!3.86e-07!21 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:56351078..56351092,- | |short_description=p@chr12:56351078..56351092,- | ||
}} | }} |
Latest revision as of 10:16, 24 July 2015
Short description: | p@chr12:56351078..56351092, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56351078..56351092, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.21e-120 | 10 |
melanoblast | 7.21e-120 | 10 |
pigment cell | 9.12e-86 | 14 |
light melanocyte | 9.64e-74 | 3 |
neurecto-epithelial cell | 3.63e-60 | 20 |
columnar/cuboidal epithelial cell | 1.16e-44 | 27 |
ecto-epithelial cell | 1.58e-35 | 34 |
migratory neural crest cell | 3.83e-28 | 41 |
dark melanocyte | 7.62e-26 | 1 |
neurectodermal cell | 6.85e-20 | 59 |
ectodermal cell | 2.04e-16 | 72 |
visual pigment cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.40e-14 | 2 |