FFCP PHASE1:Hg19::chr12:76228513..76228524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76228513..76228524,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr12:76228513..76228524,- | |description=CAGE_peak_at_chr12:76228513..76228524,- | ||
|id=chr12:76228513..76228524,- | |id=chr12:76228513..76228524,- | ||
|ontology_enrichment_celltype=CL:0002159!3.14e-08!13;CL:0000240!4.34e-08!6;CL:0000311!4.34e-08!6;CL:0000079!4.34e-08!6;CL:0000237!4.34e-08!6;CL:0000036!4.34e-08!6;CL:0000357!4.34e-08!6;CL:0000114!4.34e-08!6;CL:0002077!5.08e-08!33;CL:0000575!1.09e-07!2 | |ontology_enrichment_celltype=CL:0002159!3.14e-08!13;CL:0000240!4.34e-08!6;CL:0000311!4.34e-08!6;CL:0000079!4.34e-08!6;CL:0000237!4.34e-08!6;CL:0000036!4.34e-08!6;CL:0000357!4.34e-08!6;CL:0000114!4.34e-08!6;CL:0002077!5.08e-08!33;CL:0000575!1.09e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002567;4.07e-27;3!CL:0002149;2.11e-14;6!CL:0002255;2.11e-14;6!CL:0000148;7.66e-09;10!CL:0000239;7.02e-08;3!CL:1000615;7.02e-08;3!CL:0002306;7.02e-08;3!CL:0000075;3.40e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.72e-27,3;CL:0002149,2.04e-14,6;CL:0002255,2.04e-14,6;CL:0000148,6.80e-09,10;CL:0000541,6.80e-09,10;CL:0000239,6.34e-08,3;CL:1000615,6.34e-08,3;CL:0002306,6.34e-08,3;CL:0000075,3.09e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.28e-18;10 | |||
|ontology_enrichment_disease=DOID:0060072!2.80e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.11e-14;6!DOID:0060084;7.02e-08;3!DOID:127;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.04e-14,6;DOID:0060084,8.29e-08,3;DOID:127,8.29e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.16e-08!95;UBERON:0000165!1.11e-07!28;UBERON:0000930!1.11e-07!28;UBERON:0001444!4.61e-07!48;UBERON:0000166!9.92e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.71e-21;1!UBERON:0005056;5.71e-21;1!UBERON:0004176;5.71e-21;1!UBERON:0000995;3.09e-11;17!UBERON:0003975;1.20e-10;18!UBERON:0003134;1.49e-10;33!UBERON:0004175;3.26e-09;21!UBERON:0000474;1.75e-08;37!UBERON:0006853;7.02e-08;3!UBERON:0007685;7.02e-08;3!UBERON:0004134;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.72e-21,1;UBERON:0005056,7.72e-21,1;UBERON:0000995,3.45e-09,21;UBERON:0003134,6.06e-09,37;UBERON:0000474,6.06e-09,37;UBERON:0005795,8.47e-09,22;UBERON:0003975,8.47e-09,22;UBERON:0003100,4.22e-08,41;UBERON:0006853,6.34e-08,3;UBERON:0007685,6.34e-08,3;UBERON:0004134,6.34e-08,3;UBERON:0004175,8.22e-08,25;UBERON:0003133,5.83e-07,48 | |||
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| ||
|short_description=p@chr12:76228513..76228524,- | |short_description=p@chr12:76228513..76228524,- | ||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p@chr12:76228513..76228524, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76228513..76228524, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.72e-27 | 3 |
epithelial cell of uterus | 2.04e-14 | 6 |
stromal cell of endometrium | 2.04e-14 | 6 |
melanocyte | 6.80e-09 | 10 |
melanoblast | 6.80e-09 | 10 |
brush border epithelial cell | 6.34e-08 | 3 |
kidney cortex tubule cell | 6.34e-08 | 3 |
epithelial cell of proximal tubule | 6.34e-08 | 3 |
columnar/cuboidal epithelial cell | 3.09e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.72e-21 | 1 |
external female genitalia | 7.72e-21 | 1 |
uterus | 3.45e-09 | 21 |
female reproductive organ | 6.06e-09 | 37 |
female reproductive system | 6.06e-09 | 37 |
embryonic uterus | 8.47e-09 | 22 |
internal female genitalia | 8.47e-09 | 22 |
female organism | 4.22e-08 | 41 |
renal cortex tubule | 6.34e-08 | 3 |
region of nephron tubule | 6.34e-08 | 3 |
proximal tubule | 6.34e-08 | 3 |
internal genitalia | 8.22e-08 | 25 |
reproductive organ | 5.83e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.04e-14 | 6 |
cell type benign neoplasm | 8.29e-08 | 3 |
leiomyoma | 8.29e-08 | 3 |