FFCP PHASE1:Hg19::chr13:114562646..114562673,-: Difference between revisions
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|id=chr13:114562646..114562673,-
|short_description=p@chr13:114562646..114562673,-
|description=CAGE_peak_at_chr13:114562646..114562673,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:114562646..114562673,- | |||
|coexpression_cluster_id=C2252 | |||
|description=CAGE_peak_at_chr13:114562646..114562673,- | |||
|id=chr13:114562646..114562673,- | |||
|ontology_enrichment_celltype=CL:0000057!3.64e-09!75;CL:0002620!6.28e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.10e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.13e-09,76;CL:0002620,6.09e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.20e-09;5!DOID:450;9.20e-09;5!DOID:66;9.20e-09;5!DOID:423;9.20e-09;5!DOID:0080000;9.20e-09;5!DOID:11722;9.20e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.16e-09,5;DOID:450,6.16e-09,5;DOID:66,6.16e-09,5;DOID:423,6.16e-09,5;DOID:0080000,6.16e-09,5;DOID:11722,6.16e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.95e-15!57;UBERON:0005068!4.95e-15!57;UBERON:0006241!4.95e-15!57;UBERON:0007135!4.95e-15!57;UBERON:0003080!1.42e-12!42;UBERON:0002780!2.64e-12!41;UBERON:0001890!2.64e-12!41;UBERON:0006240!2.64e-12!41;UBERON:0002020!3.70e-12!34;UBERON:0003528!3.70e-12!34;UBERON:0001893!1.62e-11!34;UBERON:0002791!1.67e-11!33;UBERON:0007023!3.45e-11!115;UBERON:0002616!7.34e-11!59;UBERON:0001869!8.69e-11!32;UBERON:0000073!1.37e-10!94;UBERON:0001016!1.37e-10!94;UBERON:0001017!5.26e-10!82;UBERON:0003075!5.86e-10!86;UBERON:0007284!5.86e-10!86;UBERON:0000955!7.66e-10!69;UBERON:0006238!7.66e-10!69;UBERON:0004121!1.26e-09!169;UBERON:0005743!1.42e-09!86;UBERON:0000062!2.67e-09!511;UBERON:0000924!5.63e-09!173;UBERON:0006601!5.63e-09!173;UBERON:0002346!5.85e-09!90;UBERON:0000475!6.07e-09!365;UBERON:0000033!7.28e-09!123;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000153!1.59e-08!129;UBERON:0007811!1.59e-08!129;UBERON:0003102!5.62e-08!95;UBERON:0000480!5.90e-08!626;UBERON:0002619!9.23e-08!22;UBERON:0000467!9.54e-08!625;UBERON:0000468!1.35e-07!659;UBERON:0003056!5.14e-07!61;UBERON:0001950!8.57e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.77e-08;41!UBERON:0001890;4.77e-08;41!UBERON:0002791;5.32e-08;32!UBERON:0003528;7.05e-08;34!UBERON:0002020;7.05e-08;34!UBERON:0001893;2.30e-07;34!UBERON:0001869;5.33e-07;32!UBERON:0002619;5.89e-07;22!UBERON:0000956;6.99e-07;25!UBERON:0000203;6.99e-07;25!UBERON:0000073;8.75e-07;53!UBERON:0002616;8.75e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.95e-13,56;UBERON:0005068,7.95e-13,56;UBERON:0006241,7.95e-13,56;UBERON:0007135,7.95e-13,56;UBERON:0000073,1.61e-10,53;UBERON:0002616,1.61e-10,53;UBERON:0002780,5.04e-10,41;UBERON:0001890,5.04e-10,41;UBERON:0003080,5.04e-10,41;UBERON:0006240,5.04e-10,41;UBERON:0003075,1.60e-09,82;UBERON:0007284,1.60e-09,82;UBERON:0003528,3.28e-09,34;UBERON:0002020,3.28e-09,34;UBERON:0002791,8.21e-09,32;UBERON:0002346,1.06e-08,86;UBERON:0001016,1.72e-08,89;UBERON:0010371,2.56e-08,104;UBERON:0001893,4.65e-08,34;UBERON:0001869,1.29e-07,32;UBERON:0000955,2.10e-07,68;UBERON:0006238,2.10e-07,68;UBERON:0001017,3.29e-07,81;UBERON:0002619,5.65e-07,22;UBERON:0000956,7.95e-07,25;UBERON:0000203,7.95e-07,25 | |||
|phase1_expression=1.09007027562334,4.71021152560163,0.986680828671798,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0.286235987131057,0.958120975510189,1.12988375635323,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.601633342410425,0,1.56740831967947,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.797854630486527,0,0.580418477257168,0,0,0.75374599577023,1.5644487552606,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.869079113764942,0,0.486634870302636,0,0,0.43917392846563,0.458426764241994,0.364295288292542,0,0,0.174129737299267,1.06366368415092,0.715471872916026,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0.993943903390637,0.633152558322899,1.85372853138506,1.72101972449288,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0.408308342509787,2.08818339430006,0,1.18800285728205,3.4617370098998,0,0,0.841680569770331,1.00094815897571,0,0.877955241761676,2.14541457059314,0.751190294532984,0.113432183160021,8.25192324168765,4.27114777637135,5.93409323246773,2.40072876867522,1.75189299705346,3.34932702059318,0.37223371266318,8.60759294430458,0.876933046450788,8.07788077581166,2.94559675655358,0.646584227275248,4.9701342952326,0.201504196455281,1.18692414617341,0,0.545492241181669,0,0,0,0,0,0,1.09493207722749,0,1.28648187638577,0,4.64367928031979,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.860919069801795,0,0.109750285408626,0,1.50793458617446,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0.738651018262192,0,0.148631162288728,0,1.34385702559088,0.992425680696705,0.179117045405697,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.904902010304444,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,0,0,2.49932477955143,0,0,2.10833939483032,0.718874566474748,1.14861935834114,0,1.44781306667579,0.205476322550383,1.43248770591916,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,1.66376689224646,3.21172179834891,1.57702415033935,2.10854546986884,0,0,0,1.99267679560631,0,1.30325421702124,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0.744323423456331,4.29693525206575,2.52594084989766,1.66580894032411,2.55853624533352,1.76939313257968,0,0.462629081407967,0.177561725313127,0.328508624055237,0,0,0.846016147141356,1.60405176242628,2.30202472339741,0.229628896329213,2.54927635209404,1.18011973463482,0,0.462092022626489,0,0,0.422206515571503,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,1.6068392984416,0.193341436584244,0.462145851343933,0,0.413509717453592,2.25582514223375,2.32026710262766,0.340906509664404,0.445160178233687,0.661139661443912,0.576570202095319,2.80747967488085,0.10115778085555,0,4.7221852024596,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79872457583315,0.823611089208164,0.589062011728432,0,0,0,0.48763373908959,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,1.31717957183961,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.605880751037,3.63239472943886,0,0,0.921722292925374,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0.994147647766298,2.39138007897872,0.333926115068718,0,0.422250816255987,1.79323189425963,0,0,0,0,0.311039587661807,0.269605053441981,0,1.02314474045374,0.690503839458535,0,0,0,0.649376687132959,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,1.21537496453305,1.77148277162768,0.964771509003264,0,1.87984741883082,0,0,0.10893846351899,0,1.15425387755696,0.227884111694002,0.23056390438806,0.538545866458633,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0.471807930864739,0,0,0,0,0,1.18375320854817,1.20990716048664,1.22429104652196,0.884612114798832,0,0,0,0,0,0,0,1.10939738410511,0,0.783939179315021,0.34823682632161,0.698906672968121,0.859930162358083,0.19351266257817,0,0,0.193978032976839,0,0.90392296312213,1.09633539717401,0,0.823040347426423,1.17330829640882,0.320635281006135,0.213452994739353,0.19980960958213,0.432271251462318,0.229073192331831,0,0.576219191952599,0.248505071130865,0.471388069233591,0.135904206073614,0.313808538937,0,0.866851769704557,0.600420288709789,1.9166753044879,0,0.429765441419957,0,0.837847203816763,5.27068975226872,1.43574604915363,0.399358000997982,0.858452096273142,0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| ||
|short_description=p@chr13:114562646..114562673,- | |||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114562646..114562673, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114562646..114562673, - |
Coexpression cluster: | C2252_Preadipocyte_Fibroblast_Small_mesenchymal_Smooth_mesothelioma_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.13e-09 | 76 |
skin fibroblast | 6.09e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.95e-13 | 56 |
neural rod | 7.95e-13 | 56 |
future spinal cord | 7.95e-13 | 56 |
neural keel | 7.95e-13 | 56 |
regional part of nervous system | 1.61e-10 | 53 |
regional part of brain | 1.61e-10 | 53 |
regional part of forebrain | 5.04e-10 | 41 |
forebrain | 5.04e-10 | 41 |
anterior neural tube | 5.04e-10 | 41 |
future forebrain | 5.04e-10 | 41 |
neural plate | 1.60e-09 | 82 |
presumptive neural plate | 1.60e-09 | 82 |
brain grey matter | 3.28e-09 | 34 |
gray matter | 3.28e-09 | 34 |
regional part of telencephalon | 8.21e-09 | 32 |
neurectoderm | 1.06e-08 | 86 |
nervous system | 1.72e-08 | 89 |
ecto-epithelium | 2.56e-08 | 104 |
telencephalon | 4.65e-08 | 34 |
cerebral hemisphere | 1.29e-07 | 32 |
brain | 2.10e-07 | 68 |
future brain | 2.10e-07 | 68 |
central nervous system | 3.29e-07 | 81 |
regional part of cerebral cortex | 5.65e-07 | 22 |
cerebral cortex | 7.95e-07 | 25 |
pallium | 7.95e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.16e-09 | 5 |
myotonic disease | 6.16e-09 | 5 |
muscle tissue disease | 6.16e-09 | 5 |
myopathy | 6.16e-09 | 5 |
muscular disease | 6.16e-09 | 5 |
myotonic dystrophy | 6.16e-09 | 5 |