FFCP PHASE1:Hg19::chr13:24656199..24656203,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:24656199..24656203,- | |||
|coexpression_cluster_id=C2258 | |||
|description=CAGE_peak_at_chr13:24656199..24656203,- | |description=CAGE_peak_at_chr13:24656199..24656203,- | ||
|id=chr13:24656199..24656203,- | |id=chr13:24656199..24656203,- | ||
|ontology_enrichment_celltype=CL:0000084!7.80e-26!25;CL:0000827!7.80e-26!25;CL:0000791!2.42e-23!18;CL:0000789!2.42e-23!18;CL:0002420!2.42e-23!18;CL:0002419!2.42e-23!18;CL:0000790!2.42e-23!18;CL:0000838!7.55e-16!52;CL:0000542!1.83e-15!53;CL:0000051!1.83e-15!53;CL:0000624!1.05e-13!6;CL:0000623!1.00e-10!3;CL:0000825!1.00e-10!3;CL:0000625!5.39e-10!11;CL:0000738!1.27e-09!140;CL:0002087!2.53e-09!119;CL:0000893!3.28e-07!2;CL:0002489!3.28e-07!2;CL:0000809!3.28e-07!2;CL:0000808!3.28e-07!2;CL:0000894!3.28e-07!2;CL:0000806!3.28e-07!2;CL:0000807!3.28e-07!2;CL:0000805!3.28e-07!2;CL:0002425!3.28e-07!2;CL:0002031!5.71e-07!124 | |ontology_enrichment_celltype=CL:0000084!7.80e-26!25;CL:0000827!7.80e-26!25;CL:0000791!2.42e-23!18;CL:0000789!2.42e-23!18;CL:0002420!2.42e-23!18;CL:0002419!2.42e-23!18;CL:0000790!2.42e-23!18;CL:0000838!7.55e-16!52;CL:0000542!1.83e-15!53;CL:0000051!1.83e-15!53;CL:0000624!1.05e-13!6;CL:0000623!1.00e-10!3;CL:0000825!1.00e-10!3;CL:0000625!5.39e-10!11;CL:0000738!1.27e-09!140;CL:0002087!2.53e-09!119;CL:0000893!3.28e-07!2;CL:0002489!3.28e-07!2;CL:0000809!3.28e-07!2;CL:0000808!3.28e-07!2;CL:0000894!3.28e-07!2;CL:0000806!3.28e-07!2;CL:0000807!3.28e-07!2;CL:0000805!3.28e-07!2;CL:0002425!3.28e-07!2;CL:0002031!5.71e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.63e-19;3!CL:0000084;7.35e-19;25!CL:0000624;9.10e-17;6!CL:0000791;3.37e-16;18!CL:0000789;3.37e-16;18!CL:0002419;3.37e-16;18!CL:0000542;1.92e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.14e-19,3;CL:0000825,5.14e-19,3;CL:0000084,1.03e-18,25;CL:0000827,1.03e-18,25;CL:0000624,1.43e-16,6;CL:0000791,5.09e-16,18;CL:0000789,5.09e-16,18;CL:0002420,5.09e-16,18;CL:0002419,5.09e-16,18;CL:0000790,5.09e-16,18;CL:0000838,7.49e-15,52;CL:0000542,1.57e-14,53;CL:0000051,1.57e-14,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.37e-16;18!CL:0000051;1.92e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.42e-16!7;UBERON:0002370!2.23e-13!4;UBERON:0005058!2.23e-13!4;UBERON:0009113!2.23e-13!4;UBERON:0003295!2.23e-13!4;UBERON:0005562!2.23e-13!4;UBERON:0000178!9.80e-13!15;UBERON:0000179!9.80e-13!15;UBERON:0000463!9.80e-13!15;UBERON:0001042!8.99e-11!10;UBERON:0009145!8.99e-11!10;UBERON:0006562!9.87e-10!11;UBERON:0003351!6.32e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.44e-13;2!UBERON:0005058;1.44e-13;2!UBERON:0009113;1.44e-13;2!UBERON:0000178;7.44e-07;15!UBERON:0000179;7.44e-07;15!UBERON:0000463;7.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.38e-07,4;UBERON:0005058,3.38e-07,4;UBERON:0009113,3.38e-07,4;UBERON:0003295,3.38e-07,4;UBERON:0005562,3.38e-07,4;UBERON:0000178,6.67e-07,15;UBERON:0000179,6.67e-07,15;UBERON:0000463,6.67e-07,15 | |||
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| ||
|short_description=p@chr13:24656199..24656203,- | |short_description=p@chr13:24656199..24656203,- | ||
}} | }} |
Latest revision as of 15:09, 24 July 2015
Short description: | p@chr13:24656199..24656203, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24656199..24656203, - |
Coexpression cluster: | C2258_CD4_chronic_Hodgkin_acute_thymus_CD8_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.14e-19 | 3 |
pro-NK cell | 5.14e-19 | 3 |
T cell | 1.03e-18 | 25 |
pro-T cell | 1.03e-18 | 25 |
CD4-positive, alpha-beta T cell | 1.43e-16 | 6 |
mature alpha-beta T cell | 5.09e-16 | 18 |
alpha-beta T cell | 5.09e-16 | 18 |
immature T cell | 5.09e-16 | 18 |
mature T cell | 5.09e-16 | 18 |
immature alpha-beta T cell | 5.09e-16 | 18 |
lymphoid lineage restricted progenitor cell | 7.49e-15 | 52 |
lymphocyte | 1.57e-14 | 53 |
common lymphoid progenitor | 1.57e-14 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.38e-07 | 4 |
hemolymphoid system gland | 3.38e-07 | 4 |
thymic region | 3.38e-07 | 4 |
pharyngeal gland | 3.38e-07 | 4 |
thymus primordium | 3.38e-07 | 4 |
blood | 6.67e-07 | 15 |
haemolymphatic fluid | 6.67e-07 | 15 |
organism substance | 6.67e-07 | 15 |