FFCP PHASE1:Hg19::chr13:29004151..29004169,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:29004151..29004169,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_at_chr13:29004151..29004169,- | |description=CAGE_peak_at_chr13:29004151..29004169,- | ||
|id=chr13:29004151..29004169,- | |id=chr13:29004151..29004169,- | ||
|ontology_enrichment_celltype=CL:0000945!3.55e-80!24;CL:0000826!3.55e-80!24;CL:0000236!8.84e-43!14;CL:0000542!1.80e-38!53;CL:0000051!1.80e-38!53;CL:0000838!5.44e-35!52;CL:0000817!9.42e-19!3;CL:0002087!1.54e-16!119;CL:0000738!1.88e-13!140;CL:0000785!7.96e-13!2;CL:0000955!7.96e-13!2;CL:0000818!7.96e-13!2;CL:0000954!7.96e-13!2;CL:0000816!7.96e-13!2;CL:0002031!2.39e-12!124;CL:0000037!3.40e-10!172;CL:0000566!3.40e-10!172;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0000988!2.06e-09!182;CL:0000946!2.66e-07!1;CL:0000786!2.66e-07!1;CL:0000980!2.66e-07!1;CL:0000819!3.40e-07!1 | |ontology_enrichment_celltype=CL:0000945!3.55e-80!24;CL:0000826!3.55e-80!24;CL:0000236!8.84e-43!14;CL:0000542!1.80e-38!53;CL:0000051!1.80e-38!53;CL:0000838!5.44e-35!52;CL:0000817!9.42e-19!3;CL:0002087!1.54e-16!119;CL:0000738!1.88e-13!140;CL:0000785!7.96e-13!2;CL:0000955!7.96e-13!2;CL:0000818!7.96e-13!2;CL:0000954!7.96e-13!2;CL:0000816!7.96e-13!2;CL:0002031!2.39e-12!124;CL:0000037!3.40e-10!172;CL:0000566!3.40e-10!172;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0000988!2.06e-09!182;CL:0000946!2.66e-07!1;CL:0000786!2.66e-07!1;CL:0000980!2.66e-07!1;CL:0000819!3.40e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.70e-82;24!CL:0000236;4.48e-61;13!CL:0000542;1.92e-27;53!CL:0000817;1.12e-17;1!CL:0002087;1.02e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.71e-82,24;CL:0000826,7.71e-82,24;CL:0000236,9.19e-57,14;CL:0000542,7.09e-44,53;CL:0000051,7.09e-44,53;CL:0000838,1.75e-37,52;CL:0002087,1.16e-19,115;CL:0000738,1.60e-16,136;CL:0002031,1.09e-15,120;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000817,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.92e-27;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.70e-15!10;DOID:12603!8.54e-08!1;DOID:630!1.25e-07!1;DOID:0050177!1.25e-07!1;DOID:0050427!1.25e-07!1;DOID:2355!1.83e-07!1;DOID:0060073!3.40e-07!1;DOID:8675!3.40e-07!1 | |ontology_enrichment_disease=DOID:0060058!8.70e-15!10;DOID:12603!8.54e-08!1;DOID:630!1.25e-07!1;DOID:0050177!1.25e-07!1;DOID:0050427!1.25e-07!1;DOID:2355!1.83e-07!1;DOID:0060073!3.40e-07!1;DOID:8675!3.40e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:12603;5.26e-18;1!DOID:630;1.12e-17;1!DOID:0050177;1.12e-17;1!DOID:0050427;1.12e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.26e-18,1;DOID:630,1.44e-17,1;DOID:0050177,1.44e-17,1;DOID:0050427,1.44e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.13e-18!3;UBERON:0004854!1.13e-18!3;UBERON:0009034!1.13e-18!3;UBERON:0002095!1.13e-18!3;UBERON:0004782!1.13e-18!3;UBERON:0003281!1.13e-18!3;UBERON:0009664!1.13e-18!3;UBERON:0002296!1.13e-18!3;UBERON:0005602!1.13e-18!3;UBERON:0001179!1.13e-18!3;UBERON:0006293!1.13e-18!3;UBERON:0004177!2.68e-08!7;UBERON:0000945!2.57e-07!8;UBERON:0010039!2.57e-07!8;UBERON:0002372!4.34e-07!1;UBERON:0001961!4.34e-07!1;UBERON:0001744!4.34e-07!1;UBERON:0001735!4.34e-07!1;UBERON:0002581!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!1.13e-18!3;UBERON:0004854!1.13e-18!3;UBERON:0009034!1.13e-18!3;UBERON:0002095!1.13e-18!3;UBERON:0004782!1.13e-18!3;UBERON:0003281!1.13e-18!3;UBERON:0009664!1.13e-18!3;UBERON:0002296!1.13e-18!3;UBERON:0005602!1.13e-18!3;UBERON:0001179!1.13e-18!3;UBERON:0006293!1.13e-18!3;UBERON:0004177!2.68e-08!7;UBERON:0000945!2.57e-07!8;UBERON:0010039!2.57e-07!8;UBERON:0002372!4.34e-07!1;UBERON:0001961!4.34e-07!1;UBERON:0001744!4.34e-07!1;UBERON:0001735!4.34e-07!1;UBERON:0002581!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88383224259225,4.35133124084712,7.16268109954481,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.63841583378639,0,1.70692089026603,3.2031678962881,0,1.98313461835459,0.954053754535364,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,3.34445715226294,1.298422916788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88383224259225,4.35133124084712,7.16268109954481,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.63841583378639,0,1.70692089026603,3.2031678962881,0,1.98313461835459,0.954053754535364,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,3.34445715226294,1.298422916788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | ||
|short_description=p@chr13:29004151..29004169,- | |short_description=p@chr13:29004151..29004169,- | ||
}} | }} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29004151..29004169, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29004151..29004169, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.71e-82 | 24 |
pro-B cell | 7.71e-82 | 24 |
B cell | 9.19e-57 | 14 |
lymphocyte | 7.09e-44 | 53 |
common lymphoid progenitor | 7.09e-44 | 53 |
lymphoid lineage restricted progenitor cell | 1.75e-37 | 52 |
nongranular leukocyte | 1.16e-19 | 115 |
leukocyte | 1.60e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.09e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
precursor B cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.26e-18 | 1 |
genetic disease | 1.44e-17 | 1 |
monogenic disease | 1.44e-17 | 1 |
xeroderma pigmentosum | 1.44e-17 | 1 |