FFCP PHASE1:Hg19::chr13:46945037..46945052,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:46945037..46945052,- to FFCP PHASE1:Hg19::chr13:46945037..46945052,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:46945037..46945052,- | |||
|description=CAGE_peak_at_chr13:46945037..46945052,- | |||
|id=chr13:46945037..46945052,- | |||
|ontology_enrichment_celltype=CL:0000738!3.24e-21!140;CL:0002087!6.31e-18!119;CL:0000766!5.64e-17!76;CL:0000037!5.47e-15!172;CL:0000566!5.47e-15!172;CL:0002031!6.82e-15!124;CL:0000988!7.12e-14!182;CL:0002032!1.48e-13!165;CL:0000837!1.48e-13!165;CL:0002194!1.98e-13!63;CL:0000576!1.98e-13!63;CL:0000040!1.98e-13!63;CL:0000559!1.98e-13!63;CL:0000945!2.95e-13!24;CL:0000826!2.95e-13!24;CL:0002009!1.04e-12!65;CL:0000839!5.30e-12!70;CL:0002057!2.72e-11!42;CL:0000557!8.08e-11!71;CL:0000860!4.60e-10!45;CL:0000236!3.43e-09!14;CL:0000763!6.03e-09!112;CL:0000049!6.03e-09!112;CL:0000094!6.06e-09!8;CL:0000081!6.62e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.17e-32;24!CL:0000236;5.47e-28;13!CL:0000081;3.69e-19;11!CL:0000775;4.48e-19;3!CL:0000094;6.27e-19;8!CL:0000771;4.16e-13;2!CL:0000542;1.51e-11;53!CL:0002087;3.64e-08;104!CL:0000785;2.16e-07;1!CL:0000819;2.16e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.16e-32,24;CL:0000826,1.16e-32,24;CL:0000236,6.76e-26,14;CL:0000738,2.12e-21,136;CL:0000081,3.94e-19,11;CL:0000775,4.77e-19,3;CL:0000094,5.63e-19,8;CL:0000988,9.59e-17,177;CL:0000037,2.32e-16,168;CL:0000542,6.89e-16,53;CL:0000051,6.89e-16,53;CL:0002032,1.06e-15,161;CL:0000837,1.06e-15,161;CL:0002087,7.67e-14,115;CL:0000838,8.53e-14,52;CL:0000771,3.28e-13,2;CL:0002031,1.34e-11,120;CL:0000766,1.26e-07,72;CL:0000819,2.10e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-11;53!UBERON:0001045;6.87e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.68e-14;10!DOID:0060073;2.16e-07;1!DOID:8675;2.16e-07;1!DOID:630;6.87e-07;1!DOID:0050177;6.87e-07;1!DOID:12603;6.87e-07;1!DOID:0050427;6.87e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.43e-14,10;DOID:0060073,2.10e-07,1;DOID:8675,2.10e-07,1;DOID:630,5.45e-07,1;DOID:0050177,5.45e-07,1;DOID:0050427,5.45e-07,1;DOID:12603,7.29e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.76e-22!115;UBERON:0002390!5.33e-15!102;UBERON:0003061!5.33e-15!102;UBERON:0002193!4.08e-14!112;UBERON:0001049!3.87e-09!57;UBERON:0005068!3.87e-09!57;UBERON:0006241!3.87e-09!57;UBERON:0007135!3.87e-09!57;UBERON:0002405!1.28e-08!115;UBERON:0002371!1.44e-08!80;UBERON:0001893!1.71e-08!34;UBERON:0002791!5.00e-08!33;UBERON:0002020!1.52e-07!34;UBERON:0003528!1.52e-07!34;UBERON:0001474!2.30e-07!86;UBERON:0000178!2.51e-07!15;UBERON:0000179!2.51e-07!15;UBERON:0000463!2.51e-07!15;UBERON:0001869!4.07e-07!32;UBERON:0002780!5.07e-07!41;UBERON:0001890!5.07e-07!41;UBERON:0006240!5.07e-07!41;UBERON:0002346!8.34e-07!90;UBERON:0001017!8.88e-07!82;UBERON:0003080!9.76e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.87e-07;1!UBERON:0001153;6.87e-07;1!UBERON:0009854;6.87e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.88e-07,1;UBERON:0001153,6.88e-07,1;UBERON:0001045,6.88e-07,1 | |||
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| ||
|short_description=p@chr13:46945037..46945052,- | |||
}} | }} |
Latest revision as of 16:24, 24 July 2015
Short description: | p@chr13:46945037..46945052, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46945037..46945052, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.16e-32 | 24 |
pro-B cell | 1.16e-32 | 24 |
B cell | 6.76e-26 | 14 |
leukocyte | 2.12e-21 | 136 |
blood cell | 3.94e-19 | 11 |
neutrophil | 4.77e-19 | 3 |
granulocyte | 5.63e-19 | 8 |
hematopoietic cell | 9.59e-17 | 177 |
hematopoietic stem cell | 2.32e-16 | 168 |
lymphocyte | 6.89e-16 | 53 |
common lymphoid progenitor | 6.89e-16 | 53 |
hematopoietic oligopotent progenitor cell | 1.06e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-15 | 161 |
nongranular leukocyte | 7.67e-14 | 115 |
lymphoid lineage restricted progenitor cell | 8.53e-14 | 52 |
eosinophil | 3.28e-13 | 2 |
hematopoietic lineage restricted progenitor cell | 1.34e-11 | 120 |
myeloid leukocyte | 1.26e-07 | 72 |
B-1 B cell | 2.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.88e-07 | 1 |
caecum | 6.88e-07 | 1 |
midgut | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.43e-14 | 10 |
lymphatic system cancer | 2.10e-07 | 1 |
lymphosarcoma | 2.10e-07 | 1 |
genetic disease | 5.45e-07 | 1 |
monogenic disease | 5.45e-07 | 1 |
xeroderma pigmentosum | 5.45e-07 | 1 |
acute leukemia | 7.29e-07 | 1 |