FFCP PHASE1:Hg19::chr14:106208703..106208728,-: Difference between revisions
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|id=chr14:106208703..106208728,-
|short_description=p1@JN222933,p1@S76144
|description=CAGE_peak_1_at_JN222933_5end,CAGE_peak_1_at_S76144_5end
|association_with_tra...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_JN222933,S76144_5end | |||
|cluster_id=chr14:106208703..106208728,- | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_1_at_JN222933_5end,CAGE_peak_1_at_S76144_5end | |||
|id=chr14:106208703..106208728,- | |||
|ontology_enrichment_celltype=CL:0000236!2.83e-20!14;CL:0000945!8.61e-20!24;CL:0000826!8.61e-20!24;CL:0000838!9.45e-08!52;CL:0000542!1.47e-07!53;CL:0000051!1.47e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.45e-12;1!CL:0000786;3.45e-12;1!CL:0000945;3.51e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.27e-12,1;CL:0000786,3.27e-12,1;CL:0000980,3.27e-12,1;CL:0000236,3.12e-07,14;CL:0000945,3.72e-07,24;CL:0000826,3.72e-07,24;CL:0000785,9.96e-07,2;CL:0000955,9.96e-07,2;CL:0000818,9.96e-07,2;CL:0000954,9.96e-07,2;CL:0000816,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.78e-12;1!UBERON:0009143;7.76e-12;1!UBERON:0005754;7.76e-12;1!UBERON:0004872;4.60e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;7.76e-12;1!DOID:0050177;7.76e-12;1!DOID:0050427;7.76e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.76e-12,1;DOID:0050177,7.76e-12,1;DOID:0050427,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.29e-36!115;UBERON:0001829!2.71e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.63e-12;1!UBERON:0002171;2.93e-12;1!UBERON:0006518;2.93e-12;1!UBERON:0008949;2.93e-12;1!UBERON:0000101;2.93e-12;1!UBERON:0002167;2.93e-12;1!UBERON:0002372;4.78e-12;1!UBERON:0001154;4.78e-12;1!UBERON:0001153;4.78e-12;1!UBERON:0009854;4.78e-12;1!UBERON:0001961;4.78e-12;1!UBERON:0001744;4.78e-12;1!UBERON:0001042;4.78e-12;1!UBERON:0001735;4.78e-12;1!UBERON:0000998;7.76e-12;1!UBERON:0006868;7.76e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.33e-18,114;UBERON:0000029,2.63e-12,1;UBERON:0002171,2.93e-12,1;UBERON:0006518,2.93e-12,1;UBERON:0008949,2.93e-12,1;UBERON:0000101,2.93e-12,1;UBERON:0002167,2.93e-12,1;UBERON:0002372,4.53e-12,1;UBERON:0001961,4.53e-12,1;UBERON:0001744,4.53e-12,1;UBERON:0001735,4.53e-12,1;UBERON:0001154,5.62e-12,1;UBERON:0001153,5.62e-12,1;UBERON:0001045,5.62e-12,1;UBERON:0000998,6.97e-12,1;UBERON:0006868,6.97e-12,1 | |||
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| ||
|short_description=p1@JN222933,p1@S76144 | |||
}} | }} |
Latest revision as of 18:39, 24 July 2015
Short description: | p1@JN222933, p1@S76144 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JN222933_5end, CAGE_peak_1_at_S76144_5end |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | 0bp_to_JN222933, S76144_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.27e-12 | 1 |
plasma cell | 3.27e-12 | 1 |
plasmablast | 3.27e-12 | 1 |
B cell | 3.12e-07 | 14 |
lymphocyte of B lineage | 3.72e-07 | 24 |
pro-B cell | 3.72e-07 | 24 |
mature B cell | 9.96e-07 | 2 |
pre-B-II cell | 9.96e-07 | 2 |
transitional stage B cell | 9.96e-07 | 2 |
small pre-B-II cell | 9.96e-07 | 2 |
immature B cell | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.33e-18 | 114 |
lymph node | 2.63e-12 | 1 |
lower lobe of right lung | 2.93e-12 | 1 |
right lung lobe | 2.93e-12 | 1 |
lower lobe of lung | 2.93e-12 | 1 |
lobe of lung | 2.93e-12 | 1 |
right lung | 2.93e-12 | 1 |
tonsil | 4.53e-12 | 1 |
mucosa-associated lymphoid tissue | 4.53e-12 | 1 |
lymphoid tissue | 4.53e-12 | 1 |
tonsillar ring | 4.53e-12 | 1 |
vermiform appendix | 5.62e-12 | 1 |
caecum | 5.62e-12 | 1 |
midgut | 5.62e-12 | 1 |
seminal vesicle | 6.97e-12 | 1 |
seminal fluid secreting gland | 6.97e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.76e-12 | 1 |
monogenic disease | 7.76e-12 | 1 |
xeroderma pigmentosum | 7.76e-12 | 1 |