FFCP PHASE1:Hg19::chr14:107254057..107254072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:107254057..107254072,+ | |||
|description=CAGE_peak_at_chr14:107254057..107254072,+ | |description=CAGE_peak_at_chr14:107254057..107254072,+ | ||
|id=chr14:107254057..107254072,+ | |id=chr14:107254057..107254072,+ | ||
|ontology_enrichment_celltype=CL:0000451!3.00e-14!10;CL:0000453!1.23e-12!5;CL:0000990!8.05e-10!8;CL:0000784!2.64e-09!3;CL:0000817!7.49e-09!3;CL:0000945!3.50e-07!24;CL:0000826!3.50e-07!24 | |ontology_enrichment_celltype=CL:0000451!3.00e-14!10;CL:0000453!1.23e-12!5;CL:0000990!8.05e-10!8;CL:0000784!2.64e-09!3;CL:0000817!7.49e-09!3;CL:0000945!3.50e-07!24;CL:0000826!3.50e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.47e-34;3!CL:0000451;1.63e-25;10!CL:0001014;2.79e-23;2!CL:0001016;2.79e-23;2!CL:0000840;2.07e-17;5!CL:0000182;7.91e-15;12!CL:0000817;1.66e-12;1!CL:0002032;3.26e-12;1!CL:0000557;3.26e-12;1!CL:0000990;8.29e-12;8!CL:0000453;6.80e-10;5!CL:0002097;6.99e-07;2!CL:0000771;9.81e-07;2 | |ontology_enrichment_celltype_v019=CL:0000784;1.47e-34;3!CL:0000451;1.63e-25;10!CL:0001014;2.79e-23;2!CL:0001016;2.79e-23;2!CL:0000840;2.07e-17;5!CL:0000182;7.91e-15;12!CL:0000817;1.66e-12;1!CL:0002032;3.26e-12;1!CL:0000557;3.26e-12;1!CL:0000990;8.29e-12;8!CL:0000453;6.80e-10;5!CL:0002097;6.99e-07;2!CL:0000771;9.81e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.39e-34,3;CL:0000451,1.51e-25,10;CL:0001014,2.49e-23,2;CL:0001016,2.49e-23,2;CL:0000840,1.90e-17,5;CL:0001029,1.90e-17,5;CL:0000182,6.84e-15,12;CL:0000990,7.85e-12,8;CL:0000453,6.51e-10,5;CL:0002097,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.77e-16;11!UBERON:0009497;1.04e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;3.77e-16;11!UBERON:0009497;1.04e-13;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!3.21e-08!7;UBERON:0001173!3.21e-08!7;UBERON:0004912!3.21e-08!7 | |ontology_enrichment_uberon=UBERON:0002294!3.21e-08!7;UBERON:0001173!3.21e-08!7;UBERON:0004912!3.21e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.87e-09;19!UBERON:0006925;1.87e-09;19!UBERON:0002368;2.43e-07;33!UBERON:0002423;3.14e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.87e-09;19!UBERON:0006925;1.87e-09;19!UBERON:0002368;2.43e-07;33!UBERON:0002423;3.14e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.71e-09,19;UBERON:0006925,1.71e-09,19;UBERON:0008836,1.71e-09,19;UBERON:0008835,3.17e-08,22;UBERON:0003894,3.17e-08,22;UBERON:0009854,7.10e-08,23;UBERON:0002368,8.51e-08,35;UBERON:0007499,2.94e-07,25;UBERON:0009497,2.94e-07,25;UBERON:0000015,2.94e-07,25;UBERON:0002423,2.94e-07,25;UBERON:0006235,2.94e-07,25;UBERON:0004161,2.94e-07,25;UBERON:0009856,5.51e-07,26 | |||
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| ||
|short_description=p@chr14:107254057..107254072,+ | |short_description=p@chr14:107254057..107254072,+ | ||
}} | }} |
Latest revision as of 18:47, 24 July 2015
Short description: | p@chr14:107254057..107254072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:107254057..107254072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.39e-34 | 3 |
dendritic cell | 1.51e-25 | 10 |
CD1a-positive Langerhans cell | 2.49e-23 | 2 |
immature CD1a-positive Langerhans cell | 2.49e-23 | 2 |
immature conventional dendritic cell | 1.90e-17 | 5 |
common dendritic progenitor | 1.90e-17 | 5 |
hepatocyte | 6.84e-15 | 12 |
conventional dendritic cell | 7.85e-12 | 8 |
Langerhans cell | 6.51e-10 | 5 |
cortical cell of adrenal gland | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.71e-09 | 19 |
digestive gland | 1.71e-09 | 19 |
liver bud | 1.71e-09 | 19 |
hepatic diverticulum | 3.17e-08 | 22 |
liver primordium | 3.17e-08 | 22 |
digestive tract diverticulum | 7.10e-08 | 23 |
endocrine gland | 8.51e-08 | 35 |
epithelial sac | 2.94e-07 | 25 |
epithelium of foregut-midgut junction | 2.94e-07 | 25 |
anatomical boundary | 2.94e-07 | 25 |
hepatobiliary system | 2.94e-07 | 25 |
foregut-midgut junction | 2.94e-07 | 25 |
septum transversum | 2.94e-07 | 25 |
sac | 5.51e-07 | 26 |