FFCP PHASE1:Hg19::chr14:22918614..22918621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-459bp_to_uc001wdx.3_5end | |association_with_transcript=-459bp_to_uc001wdx.3_5end | ||
|cluster_id=chr14:22918614..22918621,+ | |||
|coexpression_cluster_id=C3410 | |||
|description=CAGE_peak_7_at_uc001wdx.3_5end | |description=CAGE_peak_7_at_uc001wdx.3_5end | ||
|id=chr14:22918614..22918621,+ | |id=chr14:22918614..22918621,+ | ||
|ontology_enrichment_celltype=CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0000842!1.68e-12!3;CL:0000625!2.73e-12!11;CL:0000791!7.68e-10!18;CL:0000789!7.68e-10!18;CL:0002420!7.68e-10!18;CL:0002419!7.68e-10!18;CL:0000790!7.68e-10!18;CL:0000224!1.75e-09!4;CL:0000838!4.95e-07!52;CL:0000542!7.38e-07!53;CL:0000051!7.38e-07!53;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25 | |ontology_enrichment_celltype=CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0000842!1.68e-12!3;CL:0000625!2.73e-12!11;CL:0000791!7.68e-10!18;CL:0000789!7.68e-10!18;CL:0002420!7.68e-10!18;CL:0002419!7.68e-10!18;CL:0000790!7.68e-10!18;CL:0000224!1.75e-09!4;CL:0000838!4.95e-07!52;CL:0000542!7.38e-07!53;CL:0000051!7.38e-07!53;CL:0000084!8.37e-07!25;CL:0000827!8.37e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.73e-47;3!CL:0002127;1.41e-16;1!CL:0000911;1.41e-16;1!CL:0000814;1.41e-16;1!CL:0000136;3.56e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.56e-47,3;CL:0000825,7.56e-47,3;CL:0002127,1.21e-16,1;CL:0000914,1.21e-16,1;CL:0000911,1.21e-16,1;CL:0000814,1.21e-16,1;CL:0002042,1.21e-16,1;CL:0002039,1.21e-16,1;CL:0002040,1.21e-16,1;CL:0002041,1.21e-16,1;CL:0000136,9.19e-10,15;CL:0000893,5.49e-09,2;CL:0002489,5.49e-09,2;CL:0000809,5.49e-09,2;CL:0000808,5.49e-09,2;CL:0000894,5.49e-09,2;CL:0000806,5.49e-09,2;CL:0000807,5.49e-09,2;CL:0000805,5.49e-09,2;CL:0002425,5.49e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.94e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.93e-20!15;UBERON:0000179!1.93e-20!15;UBERON:0000463!1.93e-20!15;UBERON:0004177!5.78e-13!7;UBERON:0002370!5.91e-09!4;UBERON:0005058!5.91e-09!4;UBERON:0009113!5.91e-09!4;UBERON:0003295!5.91e-09!4;UBERON:0005562!5.91e-09!4;UBERON:0002390!6.19e-07!102;UBERON:0003061!6.19e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-16;15!UBERON:0000179;1.16e-16;15!UBERON:0000463;1.16e-16;15!UBERON:0002390;1.75e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-16,15;UBERON:0000179,1.03e-16,15;UBERON:0000463,1.03e-16,15 | |||
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|short_description=p7@uc001wdx.3 | |short_description=p7@uc001wdx.3 | ||
}} | }} |
Latest revision as of 19:11, 24 July 2015
Short description: | p7@uc001wdx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_uc001wdx.3_5end |
Coexpression cluster: | C3410_NK_Natural_Whole_mature_blood_acute_Basophils |
Association with transcript: | -459bp_to_uc001wdx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.56e-47 | 3 |
pro-NK cell | 7.56e-47 | 3 |
innate effector T cell | 1.21e-16 | 1 |
immature NK T cell | 1.21e-16 | 1 |
effector T cell | 1.21e-16 | 1 |
mature NK T cell | 1.21e-16 | 1 |
immature NK T cell stage IV | 1.21e-16 | 1 |
immature NK T cell stage I | 1.21e-16 | 1 |
immature NK T cell stage II | 1.21e-16 | 1 |
immature NK T cell stage III | 1.21e-16 | 1 |
fat cell | 9.19e-10 | 15 |
thymocyte | 5.49e-09 | 2 |
double negative thymocyte | 5.49e-09 | 2 |
double-positive, alpha-beta thymocyte | 5.49e-09 | 2 |
DN4 thymocyte | 5.49e-09 | 2 |
DN1 thymic pro-T cell | 5.49e-09 | 2 |
DN2 thymocyte | 5.49e-09 | 2 |
DN3 thymocyte | 5.49e-09 | 2 |
immature single positive thymocyte | 5.49e-09 | 2 |
early T lineage precursor | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.03e-16 | 15 |
haemolymphatic fluid | 1.03e-16 | 15 |
organism substance | 1.03e-16 | 15 |