FFCP PHASE1:Hg19::chr14:22963808..22963822,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001wep.2_5end | |||
|cluster_id=chr14:22963808..22963822,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_uc001wep.2_5end | |||
|id=chr14:22963808..22963822,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.16e-33!18;CL:0000789!4.16e-33!18;CL:0002420!4.16e-33!18;CL:0002419!4.16e-33!18;CL:0000790!4.16e-33!18;CL:0000838!9.40e-30!52;CL:0000542!4.90e-29!53;CL:0000051!4.90e-29!53;CL:0000084!1.51e-22!25;CL:0000827!1.51e-22!25;CL:0000625!2.13e-17!11;CL:0002087!3.03e-15!119;CL:0000624!3.03e-15!6;CL:0000738!2.30e-14!140;CL:0002031!3.70e-13!124;CL:0000037!6.21e-10!172;CL:0000566!6.21e-10!172;CL:0002032!3.44e-09!165;CL:0000837!3.44e-09!165;CL:0000898!4.01e-09!3;CL:0000988!6.84e-09!182;CL:0000623!1.62e-07!3;CL:0000825!1.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.75e-38;18!CL:0000789;5.75e-38;18!CL:0002419;5.75e-38;18!CL:0000084;6.83e-27;25!CL:0000898;6.51e-23;3!CL:0000625;2.24e-22;11!CL:0000815;7.19e-16;2!CL:0000792;7.19e-16;2!CL:0002677;7.19e-16;2!CL:0000624;9.76e-12;6!CL:0002127;8.45e-09;1!CL:0000911;8.45e-09;1!CL:0000895;8.45e-09;1!CL:0000814;8.45e-09;1!CL:0000946;2.46e-08;1!CL:0000786;2.46e-08;1!CL:0000542;9.01e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.83e-38,18;CL:0000789,4.83e-38,18;CL:0002420,4.83e-38,18;CL:0002419,4.83e-38,18;CL:0000790,4.83e-38,18;CL:0000084,6.04e-27,25;CL:0000827,6.04e-27,25;CL:0000898,7.02e-23,3;CL:0000625,1.93e-22,11;CL:0000815,6.94e-16,2;CL:0000893,6.94e-16,2;CL:0002489,6.94e-16,2;CL:0000809,6.94e-16,2;CL:0000792,6.94e-16,2;CL:0002677,6.94e-16,2;CL:0000808,6.94e-16,2;CL:0000894,6.94e-16,2;CL:0000806,6.94e-16,2;CL:0000807,6.94e-16,2;CL:0000805,6.94e-16,2;CL:0002425,6.94e-16,2;CL:0000838,1.14e-14,52;CL:0000542,2.35e-14,53;CL:0000051,2.35e-14,53;CL:0000624,1.01e-11,6;CL:0002127,7.56e-09,1;CL:0000914,7.56e-09,1;CL:0000911,7.56e-09,1;CL:0000814,7.56e-09,1;CL:0002042,7.56e-09,1;CL:0002039,7.56e-09,1;CL:0002040,7.56e-09,1;CL:0002041,7.56e-09,1;CL:0000810,9.46e-09,1;CL:0000895,9.46e-09,1;CL:0002436,9.46e-09,1;CL:0002427,9.46e-09,1;CL:0002428,9.46e-09,1;CL:0002429,9.46e-09,1;CL:0002433,9.46e-09,1;CL:0002431,9.46e-09,1;CL:0002432,9.46e-09,1;CL:0000946,2.84e-08,1;CL:0000786,2.84e-08,1;CL:0000980,2.84e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;5.75e-38;18!CL:0002425;6.93e-16;2!CL:0002427;8.45e-09;1!CL:0000051;9.01e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.46e-17!7;UBERON:0002370!5.53e-11!4;UBERON:0005058!5.53e-11!4;UBERON:0009113!5.53e-11!4;UBERON:0003295!5.53e-11!4;UBERON:0005562!5.53e-11!4;UBERON:0000178!2.67e-09!15;UBERON:0000179!2.67e-09!15;UBERON:0000463!2.67e-09!15;UBERON:0002106!1.58e-07!3;UBERON:0004854!1.58e-07!3;UBERON:0009034!1.58e-07!3;UBERON:0002095!1.58e-07!3;UBERON:0004782!1.58e-07!3;UBERON:0003281!1.58e-07!3;UBERON:0009664!1.58e-07!3;UBERON:0002296!1.58e-07!3;UBERON:0005602!1.58e-07!3;UBERON:0001179!1.58e-07!3;UBERON:0006293!1.58e-07!3;UBERON:0003351!2.77e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.21e-08,4;UBERON:0005058,2.21e-08,4;UBERON:0009113,2.21e-08,4;UBERON:0003295,2.21e-08,4;UBERON:0005562,2.21e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.656804715599566,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.616804496998528,4.34684888015763,4.23698946623668,3.31413464014313,3.89653456815823,1.78256731016278,2.94605907474837,3.32300841875432,4.87446954777028,1.28091319725675,1.69077151827842,0.986627427622057,1.65810010671509,1.15921234294021,1.77943875794473,1.87278579662799,2.09071047609954,0.906474741580529,3.06576394881537,2.06176467289578,3.03623630423403,1.27426165729639,1.95325036156926,0.950452044448374,1.35517607169996,1.53583933385302,0,1.89421801635213,1.64225599384209,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6988097517864,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968833647540092,0.744896571550295,0,0,0,0,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0.641136984606466 | |||
|short_description=p1@uc001wep.2 | |||
}} |
Latest revision as of 19:14, 24 July 2015
Short description: | p1@uc001wep.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wep.2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc001wep.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.21e-08 | 4 |
hemolymphoid system gland | 2.21e-08 | 4 |
thymic region | 2.21e-08 | 4 |
pharyngeal gland | 2.21e-08 | 4 |
thymus primordium | 2.21e-08 | 4 |