FFCP PHASE1:Hg19::chr14:61510434..61510438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:61510434..61510438,+ | |||
|coexpression_cluster_id=C3438 | |coexpression_cluster_id=C3438 | ||
|description=CAGE_peak_at_chr14:61510434..61510438,+ | |description=CAGE_peak_at_chr14:61510434..61510438,+ | ||
|id=chr14:61510434..61510438,+ | |id=chr14:61510434..61510438,+ | ||
|ontology_enrichment_celltype=CL:0002194!5.10e-10!63;CL:0000576!5.10e-10!63;CL:0000040!5.10e-10!63;CL:0000559!5.10e-10!63;CL:0002009!5.30e-09!65;CL:0000839!1.33e-08!70;CL:0002057!2.32e-07!42;CL:0000557!3.14e-07!71 | |ontology_enrichment_celltype=CL:0002194!5.10e-10!63;CL:0000576!5.10e-10!63;CL:0000040!5.10e-10!63;CL:0000559!5.10e-10!63;CL:0002009!5.30e-09!65;CL:0000839!1.33e-08!70;CL:0002057!2.32e-07!42;CL:0000557!3.14e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.04e-09;39!CL:0000234;1.04e-09;39!CL:0000860;2.94e-07;33!CL:0002057;2.94e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.46e-11,59;CL:0000576,7.46e-11,59;CL:0000040,7.46e-11,59;CL:0000559,7.46e-11,59;CL:0000473,4.01e-10,48;CL:0000234,4.01e-10,48;CL:0002009,5.51e-10,61;CL:0000839,1.32e-08,66;CL:0000557,8.97e-08,67;CL:0000860,8.59e-07,42;CL:0002057,8.59e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.76e-12!57;UBERON:0005068!7.76e-12!57;UBERON:0006241!7.76e-12!57;UBERON:0007135!7.76e-12!57;UBERON:0002616!3.90e-11!59;UBERON:0000955!6.42e-11!69;UBERON:0006238!6.42e-11!69;UBERON:0003080!9.33e-10!42;UBERON:0002780!1.89e-09!41;UBERON:0001890!1.89e-09!41;UBERON:0006240!1.89e-09!41;UBERON:0001017!2.93e-09!82;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0001869!1.66e-08!32;UBERON:0001893!2.56e-08!34;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0005743!4.65e-08!86;UBERON:0002791!5.65e-08!33;UBERON:0001474!3.27e-07!86;UBERON:0002371!4.85e-07!80;UBERON:0002619!6.57e-07!22 | |ontology_enrichment_uberon=UBERON:0001049!7.76e-12!57;UBERON:0005068!7.76e-12!57;UBERON:0006241!7.76e-12!57;UBERON:0007135!7.76e-12!57;UBERON:0002616!3.90e-11!59;UBERON:0000955!6.42e-11!69;UBERON:0006238!6.42e-11!69;UBERON:0003080!9.33e-10!42;UBERON:0002780!1.89e-09!41;UBERON:0001890!1.89e-09!41;UBERON:0006240!1.89e-09!41;UBERON:0001017!2.93e-09!82;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0001869!1.66e-08!32;UBERON:0001893!2.56e-08!34;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0005743!4.65e-08!86;UBERON:0002791!5.65e-08!33;UBERON:0001474!3.27e-07!86;UBERON:0002371!4.85e-07!80;UBERON:0002619!6.57e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.29e-07;32!UBERON:0002791;3.70e-07;32!UBERON:0003528;4.52e-07;34!UBERON:0002020;4.52e-07;34!UBERON:0002619;6.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.61e-10,56;UBERON:0005068,6.61e-10,56;UBERON:0006241,6.61e-10,56;UBERON:0007135,6.61e-10,56;UBERON:0000073,1.28e-09,53;UBERON:0002616,1.28e-09,53;UBERON:0000955,4.39e-09,68;UBERON:0006238,4.39e-09,68;UBERON:0002780,1.04e-08,41;UBERON:0001890,1.04e-08,41;UBERON:0003080,1.04e-08,41;UBERON:0006240,1.04e-08,41;UBERON:0001869,1.81e-08,32;UBERON:0003528,4.45e-08,34;UBERON:0002020,4.45e-08,34;UBERON:0002791,5.34e-08,32;UBERON:0001893,7.05e-08,34;UBERON:0001017,1.34e-07,81;UBERON:0001016,1.40e-07,89;UBERON:0002371,1.68e-07,76;UBERON:0001474,2.47e-07,82;UBERON:0002619,3.30e-07,22 | |||
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| ||
|short_description=p@chr14:61510434..61510438,+ | |short_description=p@chr14:61510434..61510438,+ | ||
}} | }} |
Latest revision as of 21:36, 24 July 2015
Short description: | p@chr14:61510434..61510438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:61510434..61510438, + |
Coexpression cluster: | C3438_Macrophage_CD14_Monocytederived_Dendritic_Fibroblast_mesenchymal_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.46e-11 | 59 |
monocyte | 7.46e-11 | 59 |
monoblast | 7.46e-11 | 59 |
promonocyte | 7.46e-11 | 59 |
defensive cell | 4.01e-10 | 48 |
phagocyte | 4.01e-10 | 48 |
macrophage dendritic cell progenitor | 5.51e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.32e-08 | 66 |
granulocyte monocyte progenitor cell | 8.97e-08 | 67 |
classical monocyte | 8.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.61e-10 | 56 |
neural rod | 6.61e-10 | 56 |
future spinal cord | 6.61e-10 | 56 |
neural keel | 6.61e-10 | 56 |
regional part of nervous system | 1.28e-09 | 53 |
regional part of brain | 1.28e-09 | 53 |
brain | 4.39e-09 | 68 |
future brain | 4.39e-09 | 68 |
regional part of forebrain | 1.04e-08 | 41 |
forebrain | 1.04e-08 | 41 |
anterior neural tube | 1.04e-08 | 41 |
future forebrain | 1.04e-08 | 41 |
cerebral hemisphere | 1.81e-08 | 32 |
brain grey matter | 4.45e-08 | 34 |
gray matter | 4.45e-08 | 34 |
regional part of telencephalon | 5.34e-08 | 32 |
telencephalon | 7.05e-08 | 34 |
central nervous system | 1.34e-07 | 81 |
nervous system | 1.40e-07 | 89 |
bone marrow | 1.68e-07 | 76 |
bone element | 2.47e-07 | 82 |
regional part of cerebral cortex | 3.30e-07 | 22 |