FFCP PHASE1:Hg19::chr14:80892074..80892111,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:80892074..80892111,- | |||
|description=CAGE_peak_at_chr14:80892074..80892111,- | |||
|id=chr14:80892074..80892111,- | |||
|ontology_enrichment_celltype=CL:0000077!5.94e-11!19;CL:0000076!1.55e-10!62;CL:0000064!3.22e-10!3;CL:0005012!3.22e-10!3;CL:0000067!3.22e-10!3;CL:0002304!3.22e-10!3;CL:0000066!3.11e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.97e-44;3!CL:0000067;9.97e-44;3!CL:0005012;9.97e-44;3!CL:0002304;9.97e-44;3!CL:0000342;2.21e-15;1!CL:0002565;2.21e-15;1!CL:0000319;2.21e-15;1!CL:0000077;2.68e-12;19!CL:0000159;2.40e-08;2!CL:0000710;4.38e-07;20!CL:0000076;7.28e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.07e-43,3;CL:0000067,1.07e-43,3;CL:0005012,1.07e-43,3;CL:0002304,1.07e-43,3;CL:0000319,1.78e-15,1;CL:0000342,2.38e-15,1;CL:0002565,2.38e-15,1;CL:0000077,2.84e-12,19;CL:0000076,1.50e-10,63;CL:0000066,1.15e-09,253;CL:0000159,2.15e-08,2;CL:0000710,4.43e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.34e-08;2!UBERON:0010056;1.34e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.21e-15;1!DOID:1749;9.66e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.78e-15,1;DOID:1749,9.81e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.73e-13!4;UBERON:0007625!8.88e-13!11;UBERON:0001778!3.22e-10!3;UBERON:0001775!3.22e-10!3;UBERON:0002203!1.31e-08!6;UBERON:0001768!1.31e-08!6;UBERON:0000020!3.49e-07!23;UBERON:0000019!6.91e-07!19;UBERON:0000047!6.91e-07!19;UBERON:0004088!6.91e-07!19;UBERON:0003072!6.91e-07!19;UBERON:0003071!6.91e-07!19;UBERON:0004128!6.91e-07!19;UBERON:0002200!7.71e-07!11;UBERON:0006876!7.71e-07!11;UBERON:0001032!8.03e-07!24;UBERON:0004456!8.03e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.90e-57;4!UBERON:0001778;9.97e-44;3!UBERON:0001775;9.97e-44;3!UBERON:0002203;2.31e-38;6!UBERON:0001768;2.31e-38;6!UBERON:0002200;2.31e-38;6!UBERON:0007625;2.47e-32;11!UBERON:0000020;4.10e-22;23!UBERON:0001032;3.47e-21;24!UBERON:0004456;3.47e-21;24!UBERON:0006876;3.95e-21;11!UBERON:0000019;8.94e-19;19!UBERON:0000047;8.94e-19;19!UBERON:0004088;8.94e-19;19!UBERON:0010230;8.94e-19;19!UBERON:0000970;7.70e-18;20!UBERON:0002104;5.40e-17;21!UBERON:0001456;5.40e-17;21!UBERON:0001801;1.11e-16;14!UBERON:0002506;2.21e-15;1!UBERON:0001769;2.21e-15;1!UBERON:0010371;1.68e-11;31!UBERON:0001444;1.65e-08;48!UBERON:0000033;2.21e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,3.36e-57,4;UBERON:0001778,1.07e-43,3;UBERON:0001775,1.07e-43,3;UBERON:0002203,2.55e-38,6;UBERON:0001768,2.55e-38,6;UBERON:0002200,2.55e-38,6;UBERON:0007625,2.10e-32,11;UBERON:0000020,3.12e-21,24;UBERON:0001032,3.12e-21,24;UBERON:0004456,3.12e-21,24;UBERON:0006876,4.16e-21,11;UBERON:0000019,7.05e-18,20;UBERON:0000047,7.05e-18,20;UBERON:0010312,7.05e-18,20;UBERON:0004088,7.05e-18,20;UBERON:0010230,7.05e-18,20;UBERON:0003072,7.05e-18,20;UBERON:0004128,7.05e-18,20;UBERON:0003071,7.05e-18,20;UBERON:0000970,4.97e-17,21;UBERON:0002104,4.97e-17,21;UBERON:0001801,1.15e-16,14;UBERON:0001456,2.94e-16,22;UBERON:0002506,2.38e-15,1;UBERON:0001769,2.38e-15,1;UBERON:0005085,1.52e-11,31;UBERON:0001444,2.80e-10,49;UBERON:0000033,5.89e-09,56;UBERON:0000153,4.66e-08,62;UBERON:0007811,4.66e-08,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15953195521899,4.21285855178871,5.27008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,1.30151357865721,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0.949138274156178,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0.306806047506464,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.192619830407303,0,2.60994291965212,0,1.15761237161917,0.244736704506468,7.1635536432595,0,0,0,0.578742114812744,0.844712203265363,0,0.690860683462397,1.21543982470953,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,5.4297063090659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12337913364836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80892074..80892111,- | |||
}} |
Latest revision as of 23:11, 24 July 2015
Short description: | p@chr14:80892074..80892111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:80892074..80892111, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.07e-43 | 3 |
ciliated epithelial cell | 1.07e-43 | 3 |
multi-ciliated epithelial cell | 1.07e-43 | 3 |
non-pigmented ciliary epithelial cell | 1.07e-43 | 3 |
mucus secreting cell | 1.78e-15 | 1 |
pigment cell (sensu Vertebrata) | 2.38e-15 | 1 |
iris pigment epithelial cell | 2.38e-15 | 1 |
mesothelial cell | 2.84e-12 | 19 |
squamous epithelial cell | 1.50e-10 | 63 |
epithelial cell | 1.15e-09 | 253 |
seromucus secreting cell | 2.15e-08 | 2 |
neurecto-epithelial cell | 4.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.36e-57 | 4 |
ciliary epithelium | 1.07e-43 | 3 |
ciliary body | 1.07e-43 | 3 |
vasculature of eye | 2.55e-38 | 6 |
uvea | 2.55e-38 | 6 |
vasculature of head | 2.55e-38 | 6 |
pigment epithelium of eye | 2.10e-32 | 11 |
sense organ | 3.12e-21 | 24 |
sensory system | 3.12e-21 | 24 |
entire sense organ system | 3.12e-21 | 24 |
vasculature of organ | 4.16e-21 | 11 |
camera-type eye | 7.05e-18 | 20 |
simple eye | 7.05e-18 | 20 |
immature eye | 7.05e-18 | 20 |
ocular region | 7.05e-18 | 20 |
eyeball of camera-type eye | 7.05e-18 | 20 |
optic cup | 7.05e-18 | 20 |
optic vesicle | 7.05e-18 | 20 |
eye primordium | 7.05e-18 | 20 |
eye | 4.97e-17 | 21 |
visual system | 4.97e-17 | 21 |
anterior segment of eyeball | 1.15e-16 | 14 |
face | 2.94e-16 | 22 |
iris epithelium | 2.38e-15 | 1 |
iris | 2.38e-15 | 1 |
ectodermal placode | 1.52e-11 | 31 |
subdivision of head | 2.80e-10 | 49 |
head | 5.89e-09 | 56 |
anterior region of body | 4.66e-08 | 62 |
craniocervical region | 4.66e-08 | 62 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.78e-15 | 1 |
squamous cell carcinoma | 9.81e-10 | 14 |