FFCP PHASE1:Hg19::chr15:45427307..45427323,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45427307..45427323,+ | |||
|description=CAGE_peak_at_chr15:45427307..45427323,+ | |description=CAGE_peak_at_chr15:45427307..45427323,+ | ||
|id=chr15:45427307..45427323,+ | |id=chr15:45427307..45427323,+ | ||
|ontology_enrichment_celltype=CL:0002535!9.58e-09!2;CL:1000415!1.29e-08!2 | |ontology_enrichment_celltype=CL:0002535!9.58e-09!2;CL:1000415!1.29e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.15e-50;2!CL:1000415;6.85e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.15e-50,2;CL:1000415,7.30e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.45e-26;1!UBERON:0007297;6.85e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;9.93e-21;5!DOID:4929;9.40e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,9.93e-21,5;DOID:4929,8.28e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!3.29e-12!3;UBERON:0004054!3.29e-12!3;UBERON:0007023!4.56e-10!115;UBERON:0005904!3.00e-09!4;UBERON:0002294!8.63e-09!7;UBERON:0001173!8.63e-09!7;UBERON:0004912!8.63e-09!7;UBERON:0006955!9.58e-09!2;UBERON:0004801!9.58e-09!2;UBERON:0003127!2.14e-08!2;UBERON:0004175!4.01e-08!25;UBERON:0000466!2.30e-07!126;UBERON:0000065!4.78e-07!53 | |ontology_enrichment_uberon=UBERON:0006947!3.29e-12!3;UBERON:0004054!3.29e-12!3;UBERON:0007023!4.56e-10!115;UBERON:0005904!3.00e-09!4;UBERON:0002294!8.63e-09!7;UBERON:0001173!8.63e-09!7;UBERON:0004912!8.63e-09!7;UBERON:0006955!9.58e-09!2;UBERON:0004801!9.58e-09!2;UBERON:0003127!2.14e-08!2;UBERON:0004175!4.01e-08!25;UBERON:0000466!2.30e-07!126;UBERON:0000065!4.78e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.15e-50;2!UBERON:0004801;5.15e-50;2!UBERON:0006947;4.28e-34;3!UBERON:0004054;4.28e-34;3!UBERON:0000998;2.45e-26;1!UBERON:0006868;2.45e-26;1!UBERON:0001000;4.61e-26;1!UBERON:0004913;4.61e-26;1!UBERON:0003703;4.61e-26;1!UBERON:0005352;4.61e-26;1!UBERON:0001174;4.61e-26;1!UBERON:0004914;4.61e-26;1!UBERON:0005904;7.17e-26;4!UBERON:0000058;4.58e-23;10!UBERON:0004175;2.38e-19;21!UBERON:0000002;1.85e-17;6!UBERON:0001560;1.85e-17;6!UBERON:0002294;2.95e-15;7!UBERON:0001173;2.95e-15;7!UBERON:0003127;1.46e-13;2!UBERON:0000341;1.46e-13;2!UBERON:0003135;4.52e-10;11!UBERON:0002110;1.05e-09;3!UBERON:0002114;1.30e-09;2!UBERON:0003133;1.30e-08;44!UBERON:0002394;1.59e-07;4!UBERON:0003928;1.59e-07;4!UBERON:0000995;8.84e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.15e-50,2;UBERON:0004801,5.15e-50,2;UBERON:0006947,4.66e-34,3;UBERON:0004054,4.66e-34,3;UBERON:0000998,2.16e-26,1;UBERON:0006868,2.16e-26,1;UBERON:0004913,3.58e-26,1;UBERON:0003703,3.58e-26,1;UBERON:0001174,3.58e-26,1;UBERON:0004914,3.58e-26,1;UBERON:0001000,5.93e-26,1;UBERON:0005352,5.93e-26,1;UBERON:0005904,7.64e-26,4;UBERON:0000002,1.85e-17,6;UBERON:0001560,1.85e-17,6;UBERON:0004175,2.48e-16,25;UBERON:0003127,1.37e-13,2;UBERON:0000341,1.55e-13,2;UBERON:0000058,1.64e-12,19;UBERON:0002294,4.18e-12,9;UBERON:0001173,4.18e-12,9;UBERON:0004912,4.18e-12,9;UBERON:0003135,4.62e-10,11;UBERON:0002110,1.10e-09,3;UBERON:0006242,1.10e-09,3;UBERON:0002114,1.19e-09,2;UBERON:0003133,1.02e-08,48;UBERON:0005156,3.68e-07,59;UBERON:0000990,3.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,2.51932747854276,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15667522279512,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,3.83060508953771,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,4.10657903743086,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.747511887973863,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,3.84425824164318,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65725755210022,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0.434523000071005,0,0.12729431655633,0,0,0,0.202056159043763,1.57788851863888,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,2.51932747854276,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15667522279512,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,3.83060508953771,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,4.10657903743086,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.747511887973863,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,3.84425824164318,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65725755210022,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0.434523000071005,0,0.12729431655633,0,0,0,0.202056159043763,1.57788851863888,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr15:45427307..45427323,+ | |short_description=p@chr15:45427307..45427323,+ | ||
}} | }} |
Latest revision as of 01:59, 25 July 2015
Short description: | p@chr15:45427307..45427323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45427307..45427323, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.15e-50 | 2 |
epithelial cell of gall bladder | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.15e-50 | 2 |
cervix epithelium | 5.15e-50 | 2 |
male genital duct | 4.66e-34 | 3 |
internal male genitalia | 4.66e-34 | 3 |
seminal vesicle | 2.16e-26 | 1 |
seminal fluid secreting gland | 2.16e-26 | 1 |
hepatopancreatic ampulla | 3.58e-26 | 1 |
extrahepatic bile duct | 3.58e-26 | 1 |
common bile duct | 3.58e-26 | 1 |
duodenal papilla | 3.58e-26 | 1 |
vas deferens | 5.93e-26 | 1 |
spermatic cord | 5.93e-26 | 1 |
duct of male reproductive system | 7.64e-26 | 4 |
uterine cervix | 1.85e-17 | 6 |
neck of organ | 1.85e-17 | 6 |
internal genitalia | 2.48e-16 | 25 |
open tracheal system trachea | 1.37e-13 | 2 |
throat | 1.55e-13 | 2 |
duct | 1.64e-12 | 19 |
biliary system | 4.18e-12 | 9 |
biliary tree | 4.18e-12 | 9 |
biliary bud | 4.18e-12 | 9 |
male reproductive organ | 4.62e-10 | 11 |
gallbladder | 1.10e-09 | 3 |
gall bladder primordium | 1.10e-09 | 3 |
duodenum | 1.19e-09 | 2 |
reproductive organ | 1.02e-08 | 48 |
reproductive structure | 3.68e-07 | 59 |
reproductive system | 3.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 9.93e-21 | 5 |
tubular adenocarcinoma | 8.28e-14 | 2 |