FFCP PHASE1:Hg19::chr15:45950466..45950474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45950466..45950474,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr15:45950466..45950474,+ | |description=CAGE_peak_at_chr15:45950466..45950474,+ | ||
|id=chr15:45950466..45950474,+ | |id=chr15:45950466..45950474,+ | ||
|ontology_enrichment_celltype=CL:0002253!1.48e-12!2;CL:0002563!6.50e-07!4 | |ontology_enrichment_celltype=CL:0002253!1.48e-12!2;CL:0002563!6.50e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.61e-34;2!CL:0002563;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0002563,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.34e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!8.96e-40!9;UBERON:0000059!1.17e-32!11;UBERON:0001154!1.67e-23!1;UBERON:0001153!1.67e-23!1;UBERON:0006834!5.13e-23!1;UBERON:0004907!7.92e-19!5;UBERON:0000160!3.86e-13!27;UBERON:0005409!2.62e-10!35;UBERON:0001052!6.50e-07!4;UBERON:0001242!6.50e-07!4;UBERON:0001262!6.50e-07!4;UBERON:0004786!6.50e-07!4;UBERON:0004808!6.50e-07!4;UBERON:0001277!6.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.34e-66;1!UBERON:0001153;3.34e-66;1!UBERON:0009854;3.34e-66;1!UBERON:0001155;3.75e-66;9!UBERON:0000059;2.16e-54;11!UBERON:0004907;2.51e-53;5!UBERON:0000160;8.86e-34;17!UBERON:0005409;1.01e-26;22!UBERON:0004921;5.87e-18;33!UBERON:0001052;7.35e-18;4!UBERON:0001242;7.35e-18;4!UBERON:0001262;7.35e-18;4!UBERON:0004786;7.35e-18;4!UBERON:0004808;7.35e-18;4!UBERON:0001277;7.35e-18;4!UBERON:0009856;9.45e-18;4!UBERON:0000485;8.16e-11;7!UBERON:0003929;8.16e-11;7!UBERON:0003350;1.24e-09;8!UBERON:0001555;1.35e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,3.75e-66,9;UBERON:0001154,4.66e-66,1;UBERON:0001153,4.66e-66,1;UBERON:0001045,4.66e-66,1;UBERON:0000059,2.16e-54,11;UBERON:0004907,2.87e-53,5;UBERON:0000160,8.86e-34,17;UBERON:0005409,8.76e-24,25;UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0001046,5.27e-15,19;UBERON:0003350,1.24e-09,8;UBERON:0000485,1.04e-08,9 | |||
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|short_description=p@chr15:45950466..45950474,+ | |short_description=p@chr15:45950466..45950474,+ | ||
}} | }} |
Latest revision as of 02:05, 25 July 2015
Short description: | p@chr15:45950466..45950474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45950466..45950474, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.61e-34 | 2 |
intestinal epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
colon | 3.75e-66 | 9 |
vermiform appendix | 4.66e-66 | 1 |
caecum | 4.66e-66 | 1 |
midgut | 4.66e-66 | 1 |
large intestine | 2.16e-54 | 11 |
lower digestive tract | 2.87e-53 | 5 |
intestine | 8.86e-34 | 17 |
gastrointestinal system | 8.76e-24 | 25 |
rectum | 7.35e-18 | 4 |
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
hindgut | 5.27e-15 | 19 |
epithelium of mucosa | 1.24e-09 | 8 |
simple columnar epithelium | 1.04e-08 | 9 |