FFCP PHASE1:Hg19::chr15:90349797..90349814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_AB462940_5end | |association_with_transcript=5bp_to_AB462940_5end | ||
|cluster_id=chr15:90349797..90349814,- | |||
|coexpression_cluster_id=C403 | |coexpression_cluster_id=C403 | ||
|description=CAGE_peak_3_at_AB462940_5end | |description=CAGE_peak_3_at_AB462940_5end | ||
|id=chr15:90349797..90349814,- | |id=chr15:90349797..90349814,- | ||
|ontology_enrichment_celltype=CL:0000048!1.50e-29!430;CL:0000723!2.63e-28!436;CL:0000034!3.12e-26!444;CL:0002371!8.22e-24!591;CL:0002320!3.42e-21!365;CL:0000134!2.38e-19!358;CL:0000144!2.73e-17!625;CL:0002057!1.27e-16!42;CL:0000055!1.50e-16!180;CL:0000766!3.46e-16!76;CL:0000057!7.04e-16!75;CL:0002194!2.39e-15!63;CL:0000576!2.39e-15!63;CL:0000040!2.39e-15!63;CL:0000559!2.39e-15!63;CL:0000219!3.31e-15!390;CL:0000860!2.11e-14!45;CL:0000839!2.34e-14!70;CL:0002009!2.89e-14!65;CL:0000557!7.24e-14!71;CL:0000680!1.25e-10!57;CL:0000056!1.25e-10!57;CL:0000355!1.25e-10!57;CL:0000548!1.78e-10!679;CL:0000004!1.78e-10!679;CL:0000255!1.78e-10!679;CL:0000012!5.03e-10!682;CL:0002620!6.46e-10!23;CL:0000187!3.67e-09!54;CL:0000183!3.93e-09!59;CL:0000763!5.59e-09!112;CL:0000049!5.59e-09!112;CL:0000393!2.23e-07!60;CL:0000211!2.23e-07!60;CL:0000192!2.31e-07!42;CL:0000514!2.31e-07!42 | |ontology_enrichment_celltype=CL:0000048!1.50e-29!430;CL:0000723!2.63e-28!436;CL:0000034!3.12e-26!444;CL:0002371!8.22e-24!591;CL:0002320!3.42e-21!365;CL:0000134!2.38e-19!358;CL:0000144!2.73e-17!625;CL:0002057!1.27e-16!42;CL:0000055!1.50e-16!180;CL:0000766!3.46e-16!76;CL:0000057!7.04e-16!75;CL:0002194!2.39e-15!63;CL:0000576!2.39e-15!63;CL:0000040!2.39e-15!63;CL:0000559!2.39e-15!63;CL:0000219!3.31e-15!390;CL:0000860!2.11e-14!45;CL:0000839!2.34e-14!70;CL:0002009!2.89e-14!65;CL:0000557!7.24e-14!71;CL:0000680!1.25e-10!57;CL:0000056!1.25e-10!57;CL:0000355!1.25e-10!57;CL:0000548!1.78e-10!679;CL:0000004!1.78e-10!679;CL:0000255!1.78e-10!679;CL:0000012!5.03e-10!682;CL:0002620!6.46e-10!23;CL:0000187!3.67e-09!54;CL:0000183!3.93e-09!59;CL:0000763!5.59e-09!112;CL:0000049!5.59e-09!112;CL:0000393!2.23e-07!60;CL:0000211!2.23e-07!60;CL:0000192!2.31e-07!42;CL:0000514!2.31e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.86e-26;33!CL:0002057;9.86e-26;33!CL:0000473;2.14e-20;39!CL:0000234;2.14e-20;39!CL:0000576;1.50e-12;48!CL:0002620;5.67e-11;23!CL:0000766;1.21e-07;69!CL:0002559;9.74e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-25,427;CL:0000723,3.77e-24,433;CL:0000034,6.27e-23,441;CL:0000860,1.13e-19,42;CL:0002057,1.13e-19,42;CL:0000473,1.22e-19,48;CL:0000234,1.22e-19,48;CL:0002320,2.34e-18,361;CL:0000134,9.35e-18,354;CL:0002194,1.88e-16,59;CL:0000576,1.88e-16,59;CL:0000040,1.88e-16,59;CL:0000559,1.88e-16,59;CL:0000766,9.19e-16,72;CL:0002009,1.55e-15,61;CL:0000057,7.37e-15,76;CL:0000219,1.03e-13,386;CL:0000839,1.66e-13,66;CL:0000557,3.86e-13,67;CL:0002620,7.52e-11,23;CL:0000763,7.41e-09,108;CL:0000049,7.41e-09,108;CL:0000680,2.90e-07,58;CL:0000056,2.90e-07,58;CL:0000355,2.90e-07,58;CL:0002559,8.91e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.52e-22!167;UBERON:0002384!8.47e-20!375;UBERON:0000926!7.32e-17!448;UBERON:0004120!7.32e-17!448;UBERON:0006603!7.32e-17!448;UBERON:0002371!9.13e-14!80;UBERON:0003081!1.58e-13!216;UBERON:0004290!1.84e-12!70;UBERON:0000914!7.39e-12!83;UBERON:0002329!7.39e-12!83;UBERON:0003077!7.39e-12!83;UBERON:0003059!7.39e-12!83;UBERON:0007282!7.39e-12!83;UBERON:0009618!7.39e-12!83;UBERON:0007285!7.39e-12!83;UBERON:0001474!8.31e-12!86;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101;UBERON:0002390!2.16e-11!102;UBERON:0003061!2.16e-11!102;UBERON:0002405!1.16e-10!115;UBERON:0002193!4.21e-10!112;UBERON:0000479!6.09e-10!787;UBERON:0000486!3.75e-09!82;UBERON:0002385!4.31e-09!63;UBERON:0001015!4.31e-09!63;UBERON:0000383!4.31e-09!63;UBERON:0002199!5.43e-09!45;UBERON:0002416!5.43e-09!45;UBERON:0001134!6.11e-09!61;UBERON:0002036!6.11e-09!61;UBERON:0003082!6.11e-09!61;UBERON:0005256!1.15e-08!143;UBERON:0002097!8.58e-08!40;UBERON:0000468!1.30e-07!659;UBERON:0000467!3.18e-07!625;UBERON:0001637!4.00e-07!42;UBERON:0003509!4.00e-07!42;UBERON:0004572!4.00e-07!42;UBERON:0000480!4.21e-07!626;UBERON:0003102!6.63e-07!95 | |ontology_enrichment_uberon=UBERON:0002204!4.52e-22!167;UBERON:0002384!8.47e-20!375;UBERON:0000926!7.32e-17!448;UBERON:0004120!7.32e-17!448;UBERON:0006603!7.32e-17!448;UBERON:0002371!9.13e-14!80;UBERON:0003081!1.58e-13!216;UBERON:0004290!1.84e-12!70;UBERON:0000914!7.39e-12!83;UBERON:0002329!7.39e-12!83;UBERON:0003077!7.39e-12!83;UBERON:0003059!7.39e-12!83;UBERON:0007282!7.39e-12!83;UBERON:0009618!7.39e-12!83;UBERON:0007285!7.39e-12!83;UBERON:0001474!8.31e-12!86;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101;UBERON:0002390!2.16e-11!102;UBERON:0003061!2.16e-11!102;UBERON:0002405!1.16e-10!115;UBERON:0002193!4.21e-10!112;UBERON:0000479!6.09e-10!787;UBERON:0000486!3.75e-09!82;UBERON:0002385!4.31e-09!63;UBERON:0001015!4.31e-09!63;UBERON:0000383!4.31e-09!63;UBERON:0002199!5.43e-09!45;UBERON:0002416!5.43e-09!45;UBERON:0001134!6.11e-09!61;UBERON:0002036!6.11e-09!61;UBERON:0003082!6.11e-09!61;UBERON:0005256!1.15e-08!143;UBERON:0002097!8.58e-08!40;UBERON:0000468!1.30e-07!659;UBERON:0000467!3.18e-07!625;UBERON:0001637!4.00e-07!42;UBERON:0003509!4.00e-07!42;UBERON:0004572!4.00e-07!42;UBERON:0000480!4.21e-07!626;UBERON:0003102!6.63e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.19e-08;9!UBERON:0002097;2.03e-07;41!UBERON:0002073;9.74e-07;5 | |||
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| ||
|short_description=p3@AB462940 | |short_description=p3@AB462940 | ||
}} | }} |
Latest revision as of 05:24, 25 July 2015
Short description: | p3@AB462940 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB462940_5end |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | 5bp_to_AB462940_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.24e-25 | 427 |
somatic stem cell | 3.77e-24 | 433 |
stem cell | 6.27e-23 | 441 |
classical monocyte | 1.13e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-19 | 42 |
defensive cell | 1.22e-19 | 48 |
phagocyte | 1.22e-19 | 48 |
connective tissue cell | 2.34e-18 | 361 |
mesenchymal cell | 9.35e-18 | 354 |
monopoietic cell | 1.88e-16 | 59 |
monocyte | 1.88e-16 | 59 |
monoblast | 1.88e-16 | 59 |
promonocyte | 1.88e-16 | 59 |
myeloid leukocyte | 9.19e-16 | 72 |
macrophage dendritic cell progenitor | 1.55e-15 | 61 |
fibroblast | 7.37e-15 | 76 |
motile cell | 1.03e-13 | 386 |
myeloid lineage restricted progenitor cell | 1.66e-13 | 66 |
granulocyte monocyte progenitor cell | 3.86e-13 | 67 |
skin fibroblast | 7.52e-11 | 23 |
myeloid cell | 7.41e-09 | 108 |
common myeloid progenitor | 7.41e-09 | 108 |
muscle precursor cell | 2.90e-07 | 58 |
myoblast | 2.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-07 | 58 |
hair follicle cell | 8.91e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.34e-18 | 167 |
connective tissue | 1.63e-17 | 371 |
bone marrow | 1.60e-13 | 76 |
mesoderm | 1.17e-12 | 315 |
mesoderm-derived structure | 1.17e-12 | 315 |
presumptive mesoderm | 1.17e-12 | 315 |
bone element | 1.15e-11 | 82 |
integument | 8.72e-11 | 46 |
integumental system | 8.72e-11 | 46 |
somite | 1.05e-10 | 71 |
presomitic mesoderm | 1.05e-10 | 71 |
presumptive segmental plate | 1.05e-10 | 71 |
dermomyotome | 1.05e-10 | 71 |
trunk paraxial mesoderm | 1.05e-10 | 71 |
immune system | 2.05e-10 | 93 |
paraxial mesoderm | 2.06e-10 | 72 |
presumptive paraxial mesoderm | 2.06e-10 | 72 |
skeletal element | 2.47e-10 | 90 |
dense mesenchyme tissue | 3.95e-10 | 73 |
skeletal system | 7.71e-10 | 100 |
epithelial vesicle | 1.87e-09 | 78 |
skin of body | 1.94e-09 | 41 |
hematopoietic system | 3.28e-09 | 98 |
blood island | 3.28e-09 | 98 |
dermis | 1.28e-08 | 9 |
dermatome | 1.28e-08 | 9 |
future dermis | 1.28e-08 | 9 |
hemolymphoid system | 1.46e-08 | 108 |
multilaminar epithelium | 2.67e-08 | 83 |
tissue | 6.17e-07 | 773 |
hair follicle | 8.91e-07 | 5 |
hair follicle placode | 8.91e-07 | 5 |