FFCP PHASE1:Hg19::chr16:55539338..55539366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55539338..55539366,+ | |||
|coexpression_cluster_id=C351 | |coexpression_cluster_id=C351 | ||
|description=CAGE_peak_at_chr16:55539338..55539366,+ | |description=CAGE_peak_at_chr16:55539338..55539366,+ | ||
|id=chr16:55539338..55539366,+ | |id=chr16:55539338..55539366,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.13e-32!180;CL:0000680!2.07e-18!57;CL:0000056!2.07e-18!57;CL:0000355!2.07e-18!57;CL:0000192!7.54e-18!42;CL:0000514!7.54e-18!42;CL:0000187!6.02e-17!54;CL:0000183!7.56e-17!59;CL:0000393!5.76e-15!60;CL:0000211!5.76e-15!60;CL:0000057!1.06e-13!75;CL:0000359!1.67e-13!32;CL:0000222!6.47e-11!119;CL:0000048!3.60e-08!430;CL:0002334!3.92e-08!12;CL:0002539!8.68e-08!10;CL:0000723!1.18e-07!436;CL:0002371!1.44e-07!591;CL:0000499!3.00e-07!27;CL:0000034!3.71e-07!444;CL:0002620!7.47e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.13e-32!180;CL:0000680!2.07e-18!57;CL:0000056!2.07e-18!57;CL:0000355!2.07e-18!57;CL:0000192!7.54e-18!42;CL:0000514!7.54e-18!42;CL:0000187!6.02e-17!54;CL:0000183!7.56e-17!59;CL:0000393!5.76e-15!60;CL:0000211!5.76e-15!60;CL:0000057!1.06e-13!75;CL:0000359!1.67e-13!32;CL:0000222!6.47e-11!119;CL:0000048!3.60e-08!430;CL:0002334!3.92e-08!12;CL:0002539!8.68e-08!10;CL:0000723!1.18e-07!436;CL:0002371!1.44e-07!591;CL:0000499!3.00e-07!27;CL:0000034!3.71e-07!444;CL:0002620!7.47e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.10e-11;12!CL:0000499;8.70e-10;28!CL:0000192;1.00e-09;43!CL:0002539;5.58e-09;10!CL:0000136;9.69e-09;13!CL:0000359;1.01e-08;32!CL:0000134;1.87e-08;55!CL:0000153;8.97e-08;9!CL:0000447;8.97e-08;9!CL:0002320;3.03e-07;188!CL:0000048;3.93e-07;58!CL:0002595;8.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.18e-20,427;CL:0000723,1.20e-19,433;CL:0000034,1.08e-18,441;CL:0000057,5.69e-16,76;CL:0000192,2.32e-12,43;CL:0000514,2.32e-12,43;CL:0002334,9.83e-12,12;CL:0002320,1.16e-11,361;CL:0000134,2.28e-11,354;CL:0000680,6.33e-11,58;CL:0000056,6.33e-11,58;CL:0000355,6.33e-11,58;CL:0000136,7.53e-11,15;CL:0000187,5.95e-10,55;CL:0000499,9.06e-10,28;CL:0000219,3.77e-09,386;CL:0002539,5.62e-09,10;CL:0000359,7.03e-09,32;CL:0000393,2.72e-08,61;CL:0000211,2.72e-08,61;CL:0000153,1.00e-07,9;CL:0000447,1.00e-07,9;CL:0002595,3.73e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.80e-07!14 | |ontology_enrichment_disease=DOID:2394!1.80e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.17e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.62e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!4.43e-18!63;UBERON:0001015!4.43e-18!63;UBERON:0000383!4.43e-18!63;UBERON:0001134!8.38e-18!61;UBERON:0002036!8.38e-18!61;UBERON:0003082!8.38e-18!61;UBERON:0004290!1.76e-16!70;UBERON:0004872!2.40e-16!84;UBERON:0001637!3.41e-16!42;UBERON:0003509!3.41e-16!42;UBERON:0004572!3.41e-16!42;UBERON:0000486!4.69e-16!82;UBERON:0000914!2.53e-15!83;UBERON:0002329!2.53e-15!83;UBERON:0003077!2.53e-15!83;UBERON:0003059!2.53e-15!83;UBERON:0007282!2.53e-15!83;UBERON:0009618!2.53e-15!83;UBERON:0007285!2.53e-15!83;UBERON:0001981!2.54e-14!60;UBERON:0007500!2.54e-14!60;UBERON:0004537!2.54e-14!60;UBERON:0006965!2.54e-14!60;UBERON:0004573!1.20e-13!33;UBERON:0004571!1.20e-13!33;UBERON:0005256!4.19e-12!143;UBERON:0000490!7.49e-12!138;UBERON:0002049!2.39e-11!79;UBERON:0007798!2.39e-11!79;UBERON:0000055!8.66e-11!69;UBERON:0003914!1.41e-10!118;UBERON:0002100!1.13e-09!216;UBERON:0001009!3.84e-09!113;UBERON:0004535!4.51e-09!110;UBERON:0000947!7.44e-09!21;UBERON:0010191!7.44e-09!21;UBERON:0001135!1.20e-08!15;UBERON:0002199!8.39e-08!45;UBERON:0002416!8.39e-08!45;UBERON:0004237!8.68e-08!10;UBERON:0004695!8.68e-08!10;UBERON:0002111!8.68e-08!10;UBERON:0004178!8.68e-08!10;UBERON:0000475!3.29e-07!365;UBERON:0004457!8.96e-07!12;UBERON:0000042!8.96e-07!12 | |ontology_enrichment_uberon=UBERON:0002385!4.43e-18!63;UBERON:0001015!4.43e-18!63;UBERON:0000383!4.43e-18!63;UBERON:0001134!8.38e-18!61;UBERON:0002036!8.38e-18!61;UBERON:0003082!8.38e-18!61;UBERON:0004290!1.76e-16!70;UBERON:0004872!2.40e-16!84;UBERON:0001637!3.41e-16!42;UBERON:0003509!3.41e-16!42;UBERON:0004572!3.41e-16!42;UBERON:0000486!4.69e-16!82;UBERON:0000914!2.53e-15!83;UBERON:0002329!2.53e-15!83;UBERON:0003077!2.53e-15!83;UBERON:0003059!2.53e-15!83;UBERON:0007282!2.53e-15!83;UBERON:0009618!2.53e-15!83;UBERON:0007285!2.53e-15!83;UBERON:0001981!2.54e-14!60;UBERON:0007500!2.54e-14!60;UBERON:0004537!2.54e-14!60;UBERON:0006965!2.54e-14!60;UBERON:0004573!1.20e-13!33;UBERON:0004571!1.20e-13!33;UBERON:0005256!4.19e-12!143;UBERON:0000490!7.49e-12!138;UBERON:0002049!2.39e-11!79;UBERON:0007798!2.39e-11!79;UBERON:0000055!8.66e-11!69;UBERON:0003914!1.41e-10!118;UBERON:0002100!1.13e-09!216;UBERON:0001009!3.84e-09!113;UBERON:0004535!4.51e-09!110;UBERON:0000947!7.44e-09!21;UBERON:0010191!7.44e-09!21;UBERON:0001135!1.20e-08!15;UBERON:0002199!8.39e-08!45;UBERON:0002416!8.39e-08!45;UBERON:0004237!8.68e-08!10;UBERON:0004695!8.68e-08!10;UBERON:0002111!8.68e-08!10;UBERON:0004178!8.68e-08!10;UBERON:0000475!3.29e-07!365;UBERON:0004457!8.96e-07!12;UBERON:0000042!8.96e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.90e-12;33!UBERON:0004571;3.90e-12;33!UBERON:0004457;2.77e-11;9!UBERON:0000042;2.77e-11;9!UBERON:0003688;6.11e-10;6!UBERON:0002358;6.11e-10;6!UBERON:0003684;6.11e-10;6!UBERON:0001178;6.11e-10;6!UBERON:0000947;5.56e-09;21!UBERON:0010191;5.56e-09;21!UBERON:0004237;5.58e-09;10!UBERON:0004695;5.58e-09;10!UBERON:0002111;5.58e-09;10!UBERON:0004178;5.58e-09;10!UBERON:0001013;1.74e-08;14!UBERON:0002384;3.89e-08;198!UBERON:0002072;4.88e-08;5!UBERON:0001637;5.54e-08;42!UBERON:0003509;5.54e-08;42!UBERON:0004572;5.54e-08;42!UBERON:0003834;8.11e-07;5!UBERON:0001533;8.11e-07;5 | |||
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| ||
|short_description=p@chr16:55539338..55539366,+ | |short_description=p@chr16:55539338..55539366,+ | ||
}} | }} |
Latest revision as of 09:53, 25 July 2015
Short description: | p@chr16:55539338..55539366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539338..55539366, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.18e-20 | 427 |
somatic stem cell | 1.20e-19 | 433 |
stem cell | 1.08e-18 | 441 |
fibroblast | 5.69e-16 | 76 |
smooth muscle cell | 2.32e-12 | 43 |
smooth muscle myoblast | 2.32e-12 | 43 |
preadipocyte | 9.83e-12 | 12 |
connective tissue cell | 1.16e-11 | 361 |
mesenchymal cell | 2.28e-11 | 354 |
muscle precursor cell | 6.33e-11 | 58 |
myoblast | 6.33e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-11 | 58 |
fat cell | 7.53e-11 | 15 |
muscle cell | 5.95e-10 | 55 |
stromal cell | 9.06e-10 | 28 |
motile cell | 3.77e-09 | 386 |
aortic smooth muscle cell | 5.62e-09 | 10 |
vascular associated smooth muscle cell | 7.03e-09 | 32 |
electrically responsive cell | 2.72e-08 | 61 |
electrically active cell | 2.72e-08 | 61 |
GAG secreting cell | 1.00e-07 | 9 |
carbohydrate secreting cell | 1.00e-07 | 9 |
smooth muscle cell of the subclavian artery | 3.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.62e-07 | 14 |